Difference between revisions of "Map IDs"

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[http://mipav.cit.nih.gov/pubwiki/index.php/ http://mipav.cit.nih.gov/pubwiki/index.php/]
 
[http://mipav.cit.nih.gov/pubwiki/index.php/ http://mipav.cit.nih.gov/pubwiki/index.php/]
 
which should be added to the topic URL.
 
which should be added to the topic URL.
 +
 +
 +
=== Map IDs used ===
  
 
{|class="wikitable" style="text-align: left; color: #3300CC;"
 
{|class="wikitable" style="text-align: left; color: #3300CC;"
 
|'''MAP ID'''||'''Algorithm'''||'''URL'''||'''TOPIC NAME<br/> (WIKI link)'''||'''Needs cleaning/writing?'''
 
|'''MAP ID'''||'''Algorithm'''||'''URL'''||'''TOPIC NAME<br/> (WIKI link)'''||'''Needs cleaning/writing?'''
−
|-
 
−
|DTI00010||N/A||N/A||N/A||N/A
 
−
|-
 
−
|CrMPmaps001|| N/A||N/A||N/A||N/A
 
 
|-
 
|-
 
|MS00001|| PlugInMuscleImageDisplay||N/A||N/A||need to write
 
|MS00001|| PlugInMuscleImageDisplay||N/A||N/A||need to write
 
|-
 
|-
−
| MS00050|| PlugInMuscleImageDisplay542a ||N/A||N/A||need to write
+
|MS00050|| PlugInMuscleImageDisplay542a ||N/A||N/A||need to write
 
|-
 
|-
 
|10052||Microscopy>Colocalization> Orthogonal: Applying the algorithm||Microscopy_Colocalization_Orthogonal_Regression#Applying_the_algorithm || [[Microscopy Colocalization Orthogonal Regression]] || NO
 
|10052||Microscopy>Colocalization> Orthogonal: Applying the algorithm||Microscopy_Colocalization_Orthogonal_Regression#Applying_the_algorithm || [[Microscopy Colocalization Orthogonal Regression]] || NO
Line 30: Line 29:
 
|10046||Registration: Manual 2D Series||Registration:_Manual_2D_Series||[[Registration: Manual 2D Series]]|| NO
 
|10046||Registration: Manual 2D Series||Registration:_Manual_2D_Series||[[Registration: Manual 2D Series]]|| NO
 
|-
 
|-
−
|10047||Registration: Manual 2D Series: Applying the algorithm|| Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2D_images ||[[Registration: Manual 2D Series#ApplyingOnTwoD|Applying the Manual 2D Series algorithm on 2D images]]||NO
+
|10047||Registration: Manual 2D Series: Applying the algorithm|| Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2D_images ||[[Registration: Manual 2D Series#ApplyingOnTwoD|Applying the Manual 2D Series algorithm on 2D images]]||NOT USED
 
|-
 
|-
−
|19060||Registration: Manual 2D Series: Blended tab||Registration:_Manual_2D_Series#Blended_tab||[[Registration: Manual 2D Series#BlendedTab| Blended tab]]||NO
+
|19060||Registration: Manual 2D Series: Blended tab||Registration:_Manual_2D_Series#Blended_tab||[[Registration: Manual 2D Series#BlendedTab| Blended tab]]||NOT USED
 
|-
 
|-
−
|19062||Registration: Manual 2D Series: Blended tab||Registration:_Manual_2D_Series#Dual_tab||[[Registration: Manual 2D Series#DualTab| Dual tab]]||NO
+
|19062||Registration: Manual 2D Series: Blended tab||Registration:_Manual_2D_Series#Dual_tab||[[Registration: Manual 2D Series#DualTab| Dual tab]]||NOT USED
 
|-
 
|-
−
|19064||Registration: Manual 2D Series: Applying the Manual 2D Series algorithm to 2.5D images||Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2.5_images|| [[Registration: Manual 2D Series#Applying25D|Applying the Manual 2D Series algorithm on 2.5 images]]|| NO
+
|19064||Registration: Manual 2D Series: Applying the Manual 2D Series algorithm to 2.5D images||Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2.5_images|| [[Registration: Manual 2D Series#Applying25D|Applying the Manual 2D Series algorithm on 2.5 images]]|| NOT USED
 
|-   
 
|-   
 
|U4009 ||MIPAV Utilities: Add Image Margins ||Adding_image_margins||[[Adding image margins]]|| NO
 
|U4009 ||MIPAV Utilities: Add Image Margins ||Adding_image_margins||[[Adding image margins]]|| NO
 
|-   
 
|-   
 +
|U4003 ||MIPAV Utilities: Extract 3d subset ||4_D_tools#Extracting_3D_subset_from_4D||[[4 D tools#Extracting 3D subset from 4D]]|| NO
 +
|-
 
|10506 ||MIPAV Utilities: Contouring structures interactively ||Segmenting_Images_Using_Contours_and_Masks:_Using_contours_to_segment_a_VOI||[[Segmenting Images Using Contours and Masks: Using contours to segment a VOI#ContouringStructuresInteractively| Contouring Structures Interactively]]|| NO
 
|10506 ||MIPAV Utilities: Contouring structures interactively ||Segmenting_Images_Using_Contours_and_Masks:_Using_contours_to_segment_a_VOI||[[Segmenting Images Using Contours and Masks: Using contours to segment a VOI#ContouringStructuresInteractively| Contouring Structures Interactively]]|| NO
 
|-
 
|-
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|-
 
|-
 
|10007 ||Filters (Spatial): Anisotropic Diffusion: Applying the algorithm||Filters_(Spatial)_Anisotropic_Diffusion#Applying_the_Anisotropic_Diffusion_algorithm||[[Filters (Spatial) Anisotropic Diffusion#ApplyingAnisotropicDiffusion |Filters (Spatial) Anisotropic Diffusion- Applying the algorithm]]|| NO
 
|10007 ||Filters (Spatial): Anisotropic Diffusion: Applying the algorithm||Filters_(Spatial)_Anisotropic_Diffusion#Applying_the_Anisotropic_Diffusion_algorithm||[[Filters (Spatial) Anisotropic Diffusion#ApplyingAnisotropicDiffusion |Filters (Spatial) Anisotropic Diffusion- Applying the algorithm]]|| NO
−
|- 
 
−
|102572||JDialogAnnotation.java|||||| NOT FOUND
 
 
|-  
 
|-  
 
|Autocor001 ||Autocorrelation coefficients ||Autocorrelation_Coefficients||[[Autocorrelation Coefficients#ApplyingAutocorrelationCoefficients| Applying Autocorrelation Coefficients]]|| NO
 
|Autocor001 ||Autocorrelation coefficients ||Autocorrelation_Coefficients||[[Autocorrelation Coefficients#ApplyingAutocorrelationCoefficients| Applying Autocorrelation Coefficients]]|| NO
Line 54: Line 53:
 
|Autocovar01 ||Autocovariance coefficients ||Autocovariance_Coefficients||[[Autocovariance Coefficients#ApplyingAutocovarianceCoefficients| Applying Autocovariance Coefficients]]|| NO
 
|Autocovar01 ||Autocovariance coefficients ||Autocovariance_Coefficients||[[Autocovariance Coefficients#ApplyingAutocovarianceCoefficients| Applying Autocovariance Coefficients]]|| NO
 
|-
 
|-
−
|Barr010||Barrel distortion correction||Barrel_Distortion_Correction||[[Barrel Distortion Correction]]||YES
+
|Barr010||Barrel distortion correction||Barrel_Distortion_Correction||[[Barrel Distortion Correction]]||NO
 
|-  
 
|-  
−
|Mor001||Background Distance map||Morphology#Background_Distance_map||[[Morphology#Background Distance map]]||NO
+
|Mor001||Morphology: Background Distance map||Morphology#Background_Distance_map||[[Morphology#Background Distance map]]||NO
 +
|-
 +
|Mor010FE||Morphology: Apply find Edges||Morphology#Find_Edges||[[Morphology#Find_Edges]]||NO
 
|-  
 
|-  
 
|10090||Extract Brain: Extract Brain Surface (BSE)||Extract_Brain:_Extract_Brain_Surface_(BSE)||[[Extract Brain: Extract Brain Surface (BSE)#ApplyingBSE| Applying BSE]]||NO
 
|10090||Extract Brain: Extract Brain Surface (BSE)||Extract_Brain:_Extract_Brain_Surface_(BSE)||[[Extract Brain: Extract Brain Surface (BSE)#ApplyingBSE| Applying BSE]]||NO
Line 71: Line 72:
 
|-
 
|-
 
|Mor005Cl1 ||Morphology: Close: Applying the closing ||Morphology#Applying_the_closing||[[Morphology#Applying the closing]]|| NO
 
|Mor005Cl1 ||Morphology: Close: Applying the closing ||Morphology#Applying_the_closing||[[Morphology#Applying the closing]]|| NO
 +
|-
 +
|Mor002Dil ||Morphology: Dilation||Morphology#Dilate||[[Morphology#Dilate]]|| NO
 
|-  
 
|-  
 
|10086 ||Filters (Spatial): Coherence-Enhancing Diffusion ||Filters_(Spatial):_Coherence-Enhancing_Diffusion#Applying_the_Coherence-Enhancing_Diffusion_algorithm||[[Filters (Spatial): Coherence-Enhancing Diffusion#Applying the Coherence-Enhancing Diffusion algorithm]]|| NO
 
|10086 ||Filters (Spatial): Coherence-Enhancing Diffusion ||Filters_(Spatial):_Coherence-Enhancing_Diffusion#Applying_the_Coherence-Enhancing_Diffusion_algorithm||[[Filters (Spatial): Coherence-Enhancing Diffusion#Applying the Coherence-Enhancing Diffusion algorithm]]|| NO
Line 81: Line 84:
 
|-
 
|-
 
|U4013 ||Utilities: Convert image types ||Converting_image_datasets_to_different_data_types||[[Converting image datasets to different data types]]|| NO
 
|U4013 ||Utilities: Convert image types ||Converting_image_datasets_to_different_data_types||[[Converting image datasets to different data types]]|| NO
 +
|-
 +
|U4019 ||Utilities: DICOM: Save range of slices ||Converting_non-DICOM_image_files_to_DICOM_format#Save_Range_of_Slices_dialog_box||[[Converting non-DICOM image files to DICOM format#Save Range of Slices dialog box]]|| NO
 
|-  
 
|-  
 
|U4021 ||Utilities: Crop ||Cropping_images||[[Cropping images]]|| NO
 
|U4021 ||Utilities: Crop ||Cropping_images||[[Cropping images]]|| NO
Line 86: Line 91:
 
|U4023 ||Utilities: Crop boundary pixels||Cropping_images#Crop_Boundary_Pixels||[[Cropping images#Crop Boundary Pixels]]|| NO
 
|U4023 ||Utilities: Crop boundary pixels||Cropping_images#Crop_Boundary_Pixels||[[Cropping images#Crop Boundary Pixels]]|| NO
 
|-  
 
|-  
−
|Transform010 ||N/A||N/A||N/A|| N/A
+
|U4035||Utilities: Invert Image||Inverting_the_image||[[Inverting the image]]|| NO
 +
|-
 +
|U4039||Utilities: Additive noise||Adding_noise_to_images||[[Adding noise to images]]|| NO
 
|-  
 
|-  
 
|OAR19076 ||Optimized Automatic Registration dialog box ||Optimized_automatic_registration_3D#Optimized_Automatic_Registration_dialog_box_options||[[Optimized automatic registration 3D#Optimized Automatic Registration dialog box options]]|| NO
 
|OAR19076 ||Optimized Automatic Registration dialog box ||Optimized_automatic_registration_3D#Optimized_Automatic_Registration_dialog_box_options||[[Optimized automatic registration 3D#Optimized Automatic Registration dialog box options]]|| NO
Line 138: Line 145:
 
|Haral1001||N/A||N/A||N/A||  
 
|Haral1001||N/A||N/A||N/A||  
 
|-
 
|-
−
|U4035||Utilities: Invert Image||Inverting_the_image||[[Inverting the image]]|| NO
 
−
|-
 
 
|Mor004OP1||Morphology: Applying the opening||Morphology#Open||[[Morphology#Open]]|| NO
 
|Mor004OP1||Morphology: Applying the opening||Morphology#Open||[[Morphology#Open]]|| NO
 
|-  
 
|-  
Line 149: Line 154:
 
|-  
 
|-  
 
|U4053||Utilities:Insert missing slices||Slice_tools#Insert_Missing_Slices||[[Slice tools#Insert Missing Slices]]|| NO
 
|U4053||Utilities:Insert missing slices||Slice_tools#Insert_Missing_Slices||[[Slice tools#Insert Missing Slices]]|| NO
 +
|-
 +
|U4055||Utilities:Insert slice||Slice_tools#Applying_insert_missing_slices||[[Slice tools#Applying insert missing slices]]|| NO
 +
|-
 +
|U4059||Utilities:Remove slices||Inserting_slices_into_image_datasets#Removing_images_.28slices.29_from_datasets||[[Inserting slices into image datasets#Removing images .28slices.29 from datasets]]|| NO
 
|-
 
|-
 
|PT0007||Paint Power Tools dialog box||Segmenting_Images_Using_Contours_and_Masks:_Advanced_paint_and_Power_Paint_tools||[[Segmenting Images Using Contours and Masks: Advanced paint and Power Paint tools]]|| NO
 
|PT0007||Paint Power Tools dialog box||Segmenting_Images_Using_Contours_and_Masks:_Advanced_paint_and_Power_Paint_tools||[[Segmenting Images Using Contours and Masks: Advanced paint and Power Paint tools]]|| NO
Line 158: Line 167:
 
|10026||Fuzzy C-Means: Multispectral and Single Channel Algorithms||Fuzzy_C-Means:_Multispectral_and_Single_Channel_Algorithms||[[Fuzzy C-Means: Multispectral and Single Channel Algorithms]]|| NO
 
|10026||Fuzzy C-Means: Multispectral and Single Channel Algorithms||Fuzzy_C-Means:_Multispectral_and_Single_Channel_Algorithms||[[Fuzzy C-Means: Multispectral and Single Channel Algorithms]]|| NO
 
|-
 
|-
−
|HoughCircle002||Hough Transform||Hough_Transform#Running_the_Hough_Transform_for_Circle_Detection_algorithm||Hough Transform#Running the Hough Transform for Circle Detection algorithm|| YES
+
|HoughCircle002||Hough Transform||Hough_Transform#Running_the_Hough_Transform_for_Circle_Detection_algorithm||[[Hough Transform#Running the Hough Transform for Circle Detection algorithm]]|| NO
 
|-
 
|-
 +
|HoughLine001||Hough Transform: Line||Hough_Transform#Running_the_Hough_Transform_for_Line_Filing_algorithm||[[Hough Transform#Running the Hough Transform for Line Filing algorithm]]|| NO
 +
|-
 +
|HoughPar004||Hough Transform: Parabola||Hough_Transform#Running_the_Hough_Transform_for_Parabola_Detection_algorithm||[[Hough Transform#Running the Hough Transform for Parabola Detection algorithm]]|| NO
 +
|-
 +
|HoughHyperbola001||Hough Transform: Hyperbola||N/A||N/A|| NOT USED
 +
|-
 +
|10083||Microscopy: FRAP||Microscopy:_FRAP_(Fluorescence_Recovery_After_Photobleaching)#Applying_the_FRAP_algorithm||[[Microscopy: FRAP (Fluorescence Recovery After Photobleaching)#Applying the FRAP algorithm]]|| NO
 +
|-
 +
|Hist010Cum||Cumulative Histogram||Cumulative_Histogram#Applying_Cumulative_Histogram_algorithm_to_images||[[Cumulative Histogram#Applying Cumulative Histogram algorithm to images]]|| NOT USED
 +
|-
 +
|U4041||Utilities: Pad||Pad||Pad|| NO
 +
|-
 +
|10034||Reslice-Isotropic Voxels||Reslice-Isotropic_Voxels||[[Reslice-Isotropic Voxels]]|| NO
 +
|-
 +
|Mor008ES||Morphology: Apply Evaluate Segmentation||Morphology#Applying_evaluate_segmentation||[[Morphology#Applying evaluate segmentation]]|| NO
 +
|-
 +
|Mor009FH||Morphology: Apply Fill Holes||Morphology#Applying_fill_holes||[[Morphology#Applying fill holes]]|| NO
 +
|-
 +
|ISPImages01||N/A||N/A||N/A|| NO
 +
|-
 +
|Edge020||Edge Detection: Edge Laplacian dialog box||Edge_Detection:_Zero_X_Laplacian||[[Edge Detection: Zero X Laplacian]]|| NO
 +
|-
 +
|Edge022||Edge Detection: EdgeNMSuppression dialog box||Edge_Detection:_Zero_X_Non-Maximum_Suppression#Applying_the_Zero_X_Non-Maximum_Suppression_algorithm||[[Edge Detection: Zero X Non-Maximum Suppression#Applying the Zero X Non-Maximum Suppression algorithm]]|| NO
 +
|-
 +
|19003||Microscopy: Blind Deconvolution algorithm||Microscopy:_Blind_Deconvolution#Applying_the_Maximum_Likelihood_Iterative_Blind_Deconvolution_algorithm||[[Microscopy: Blind Deconvolution#Applying the Maximum Likelihood Iterative Blind Deconvolution algorithm]]|| NO
 +
|-
 +
|10045||Extract Brain Surface: Applying the algorithm||Extract_Brain:_Extract_Brain_Surface_(BET)||[[Extract Brain: Extract Brain Surface (BET)]]|| NO
 +
|-
 +
|U4043||Utilities: Quantify Mask||Quantify_Mask||[[Quantify Mask]]|| NO
 +
|-
 +
|U4033||Utilities: Image Math||Image_Math||[[Image Math]]|| NO
 +
|-
 +
|U4037||Utilities: Match Images||Matching_images||[[Matching images]]|| NO
 +
|-
 +
|U4025||Utilities: Fill image||Masking_(filling)_images||[[Masking (filling) images]]|| NO
 +
|-
 +
|U4027||Utilities: Flip Image||Flipping_images||[[Flipping images]]|| NO
 +
|-
 +
|U4045||Utilities: Replace Pixel/Voxel Value||Replacing_pixel/voxel_value_in_images||[[Replacing pixel/voxel value in images]]|| NO
 +
|-
 +
|10009||Filters (Spatial): Gaussian Blur: Applying the algorithm||[[Filters_(Spatial):_Gaussian_Blur||Filters (Spatial): Gaussian Blur]]|| NO
 +
|-
 +
|19040||Transformation tools: Transnform to Power of 2, Resample dialog||Transform_to_power_of_2#Resample_dialog_box||[[Transform to power of 2#Resample dialog box]]|| NO
 +
|-
 +
|CMNCC001||Transform: Conformal Mapping Algorithms:Nearly Circle to Circle algorithm ||Transform:_Conformal_Mapping_Algorithms#Applying_the_Nearly_Circle_to_Circle_algorithm||[[Transform: Conformal Mapping Algorithms#Applying the Nearly Circle to Circle algorithm]]|| YES
 +
|-
 +
|CMSR001||Transform: Conformal Mapping Algorithms:Circular Sector to Rectangle||Transform:_Conformal_Mapping_Algorithms#Circular_Sector_to_Rectangle||[[Transform: Conformal Mapping Algorithms#Circular Sector to Rectangle]]|| YES
 +
|-
 +
|CMEC001||Transform: Conformal Mapping Algorithms:Ellipse to Circle algorithm||Transform:_Conformal_Mapping_Algorithms#Transformation:_Ellipse_to_Circle||[[Transform: Conformal Mapping Algorithms#Transformation: Ellipse to Circle]]|| NOT USED
 +
|-
 +
|CMCR001||Transform: Conformal Mapping Algorithms:Circle to Rectangle algorithm||Transform:_Conformal_Mapping_Algorithms#Applying_the_Circle_to_Rectangle_algorithm||[[Transform: Conformal Mapping Algorithms#Applying the Circle to Rectangle algorithm]]|| YES
 +
|-
 +
|10703||Creating scripts||Using_Scripts_(Macros)_in_MIPAV||[[Using Scripts (Macros) in MIPAV]]|| NO
 +
|-
 +
|10093||Filters (Spatial): Mode: Applying the algorithm||Filters_(Spatial):_Mode#Applying_the_Mode_algorithm||[[Filters (Spatial): Mode#Applying the Mode algorithm]]`|| NO
 +
|-
 +
|MS00001||Applying the Muscle Segmentation algorithm||Muscle_Segmentation#Applying_the_algorithm||[[Muscle Segmentation#Applying the algorithm]]||YES
 +
|-
 +
|MS00050||Muscle Segmentation:Abdomen tab||Muscle_Segmentation#Applying_the_algorithm||[[Muscle Segmentation#Applying the algorithm]]||YES
 +
|-
 +
|MS00040||Muscle Segmentation:Analysis tab||Muscle_Segmentation#Applying_the_algorithm||[[Muscle Segmentation#Applying the algorithm]]||YES
 +
|-
 +
|MS00080||Muscle Segmentation:Analysis tab||Muscle_Segmentation#Applying_the_algorithm||[[Muscle Segmentation#Applying the algorithm]]||YES
 +
|-
 +
|102572||Annotation dialog box||Creating_new_images#Annotating_images_with_text||[[Creating new images#Annotating images with text]]|| NO
 +
|-
 +
|QS5020||Annotation dialog box||Creating_new_images#Annotating_images_with_text||[[Creating new images#Annotating images with text]]|| NOT USED (2 IDS for the same topic)
 +
|-
 +
|19001||Extract Surface (Marching Cubes) Algorithm||Extract_Surface_(Marching_Cubes)#Applying_the_Extract_Surface_Algorithm||[[Extract Surface (Marching Cubes)#Applying the Extract Surface Algorithm]]|| NO
 +
|-
 +
|10017||Filters (Spatial): Median: Applying the algorithm||Filters_(Spatial):_Median#Applying_the_Median_Filter_algorithm||[[Filters (Spatial): Median#Applying the Median Filter algorithm]]|| NO
 +
|-
 +
|10015||Filters (Spatial): Mean: Applying the algorithm||Filters_(Spatial):_Mean#Applying_the_Mean_algorithm||[[Filters (Spatial): Mean#Applying the Mean algorithm]]|| NO
 +
|-
 +
|ISPImages01||NDAR||N/A||N/A|| N/A
 +
|-
 +
|19074||Segmentation:Threshold||Threshold||[[Threshold]]|| NO
 +
|-
 +
|10091||Quick Start: To allocate more memory||Allocating_Memory_in_MIPAV||[[Allocating Memory in MIPAV]]|| NO
 +
|-
 +
|10715||Quick Start: To run scripts from the File menu (group mode)||Running_scripts||[[Running scripts]]|| NO
 +
|-
 +
|10097||Microscopy: FRET Efficiency)||Microscopy:_Fluorescence_Resonance_Energy_Transfer_(FRET)-Acceptor#Applying_the_FRET_algorithm||[[Microscopy: Fluorescence Resonance Energy Transfer (FRET)-Acceptor#Applying the FRET algorithm]]|| NO
 +
|-
 +
|10079||Utilities:Removing images (slices) from datasets (Remove Slices command) ||Inserting_slices_into_image_datasets#Removing_images_.28slices.29_from_datasets||[[Inserting slices into image datasets#Removing images .28slices.29 from datasets]]|| NO
 +
|-
 +
|10231||Calculating VOI statistics||Calculating_statistics_on_VOI_groups||[[Calculating statistics on VOI groups]]|| NO
 +
|-
 +
|GroupStat001||Calculating VOI statistics||Calculating_statistics_on_VOI_groups||[[Calculating statistics on VOI groups]]|| NO
 +
|-
 +
|10025||Filters (Spatial): Unsharp Mask: Applying the algorithm||Filters_(Spatial):_Unsharp_Mask||[[Filters_(Spatial):_Unsharp_Mask]]|| NO
 +
|-
 +
|A3001||Histogram summary||Histogram_summary||[[Histogram summary]]|| NO
 +
|-
 +
|13010||Talairach Transform dialog box||Mapping_Brains_in_Talairach_Space||[[Mapping Brains in Talairach Space]]|| NO
 +
|-
 +
|10013||Filters (Spatial): Laplacian: Applying the algorithm||Filters_(Spatial)_Laplacian#Applying_the_Laplacian_algorithm||[[Filters (Spatial) Laplacian#Applying the Laplacian algorithm]]|| NO
 +
|-
 +
|10019||Filters (Spatial): Nonlinear Noise Reduction: Applying the algorithm||Filters_(Spatial):_Nonlinear_Noise_Reduction#Applying_the_algorithm||[[Filters (Spatial): Nonlinear Noise Reduction#Applying the algorithm]]|| NO
 +
|-
 +
|StDev001||Standard Deviation Threshold: Applying the algorithm to grayscale images||Standard_Deviation_Threshold#Applying_the_algorithm_to_grayscale_images||[[Standard Deviation Threshold#Applying the algorithm to grayscale images]]|| NO
 +
|-
 +
|StDev005||Standard Deviation Threshold: Applying the algorithm to RGB images||Standard_Deviation_Threshold#Applying_the_algorithm_to_grayscale_images||[[Standard Deviation Threshold#Applying the algorithm to RGB images]]|| NO
 +
|-
 +
|U4031||Utilities: Image Calculator: Enter Advanced Operator dialog box||Image_Calculator:_Advanced_image_calculator_options#Enter_Advanced_Operator_dialog_box||[[Image Calculator: Advanced image calculator options#Enter Advanced Operator dialog box]]|| NO
 +
|-
 +
|U4063||Utilities: Subtract VOI Background||Subtract_VOI_Background||[[Subtract VOI Background]]|| NO
 +
|-
 +
|PT0003||Paint tools: Multiple paint tools dialog box||Segmenting_Images_Using_Contours_and_Masks:_Advanced_paint_and_Power_Paint_tools#Multiple_Paint_Tools_dialog_box_options||[[Segmenting Images Using Contours and Masks: Advanced paint and Power Paint tools#Multiple Paint Tools dialog box options]]|| NO
 +
|-
 +
|Mor007DM||Morphology: Apply Distance map||Morphology#Distance_Map||[[Morphology#Distance Map]]|| NO
 +
|-
 +
|19006||Shading Correction Inhomogeneity N3 Correction applying||Shading_Correction:_Inhomogeneity_N3_Correction#Applying_the_Inhomogeneity_N3_algorithm||[[Shading Correction: Inhomogeneity N3 Correction#Applying the Inhomogeneity N3 algorithm]]|| NO
 +
|-
 +
|  ||  ||||||
 
|}
 
|}
  
−
Next: Folder 51
+
=== More MapIDs used ===
 +
These MAP IDs were under "MapIDs used, but no wiki:", but I either figure out the corresponding pages for these IDs, or created stub pages.
  
−
MAP IDs in [[File:MAP_IDs.pdf|PDF]]
+
{|class="wikitable" style="text-align: left; color: #3300CC;"
 +
|'''MAP ID'''||'''Algorithm'''||'''URL'''||'''TOPIC NAME<br/> (WIKI link)'''||'''Needs cleaning/writing?'''
 +
|-
 +
|102572||Annotation dialog box||Creating_new_images#To_annotate_images_with_text:|| [[Creating new images#To annotate images with text:]]|| NO
 +
|-
 +
|Transform010 ||Transforming images||Transform||[[Transform]]|| YES
 +
|-
 +
|DTI00010||DTI: Create List File||DTI:_Create_List_File||[[DTI: Create List File]]||YES
 +
|-
 +
|CrMPmaps001|| PlugInDialogNEIRetinalRegistration||NEIRetinalRegistration||[[NEIRetinalRegistration]]||NO
 +
|-
 +
|AnMPmaps002||NEIRetinalRegistration||NEIRetinalRegistration||[[NEIRetinalRegistration]]||NO
 +
|-
 +
|10021||Filters (Spatial): Nonmaximum Suppression: Applying the algorithm||Filters_(Spatial):_Nonmaximum_Suppression#Applying_the_Nonmaximum_Suppression_algorithm||[[Filters (Spatial): Nonmaximum Suppression#Applying the Nonmaximum Suppression algorithm]]||NO
 +
|-
 +
|PaintGrow001||Creating a mask using the paint grow segmentation method||Creating_a_mask_using_the_Paint_Grow_Segmentation_method||[[Creating a mask using the Paint Grow Segmentation method]]||NO
 +
|-
 +
|10526||Creating a mask using the paint grow segmentation method||Creating_a_mask_using_the_Paint_Grow_Segmentation_method||[[Creating a mask using the Paint Grow Segmentation method]]||This is a MAP ID from [[File:MAP_IDs.pdf]]
 +
|-
 +
|Mor012PA||Apply Particle Analysis||Morphology#Applying_particle_analysis||[[Morphology#Applying particle analysis]]||NO
 +
|-
 +
|10040||Registration: Landmark—Least Squares||Registration:_Landmark-Least_Squares||[[Registration: Landmark-Least Squares]]||NO
 +
|-
 +
|U4005||Remove time volumes||4_D_tools#Removing_time_volumes||[[4 D tools#Removing time volumes]]||NO
 +
|-
 +
|U4015||Concatenate-> RGB||Converting_image_datasets_to_different_data_types#Concatenate-RGB||[[Converting image datasets to different data types#Concatenate-RGB]]||NO
 +
|-
 +
|TransNon10||Transformation tools: Transnform nonlinear||Transform_nonlinear||[[Transform nonlinear]]||YES
 +
|-
 +
|Mor015UE||Apply Ultimate Erode||Morphology#Ultimate_erode||[[Morphology#Ultimate erode]]||NO
 +
|-
 +
|WThresh01||Applying the Wavelet Thresholding algorithm||Filters_(Wavelet):_Thresholding||[[Filters (Wavelet): Thresholding]]||NO
 +
|-
 +
|HoughEllipse003||Hough Transform for Ellipse Detection||Hough_Transform#Running_the_Hough_Transform_for_Ellipse_Detection_algorithm||[[Hough Transform#Running the Hough Transform for Ellipse Detection algorithm]]||NO
 +
|-
 +
|U4051||Utilities: Extract slices/volumes||Slice_tools#Extracting_slices_and_volumes||[[Slice tools#Extracting slices and volumes]]||NO
 +
|-
 +
|FilFr010||Fiters Frequency||Filters_(Frequency)||[[Filters (Frequency)]]||NO
 +
|-
 +
|10096||Microscopy: FRET Bleed Through: Applying the Algorithm||Microscopy:_Fluorescent_Resonance_Energy_Transfer_(FRET)_Bleed_Through_and_Efficiency#Applying_the_FRET_Bleed_Through_algorithm||[[Microscopy: Fluorescent Resonance Energy Transfer (FRET) Bleed Through and Efficiency#Applying the FRET Bleed Through algorithm]]||NO
 +
|-
 +
|Haral1001||Filters (Spatial): Haralick Texture||Filters_(Spatial):_Haralick_Texture||[[Filters (Spatial): Haralick Texture]]||YES
 +
|-
 +
|}
  
 +
MAP IDs in  [[File:MAP_IDs.pdf|PDF]]
  
 
[[Category:Help]]
 
[[Category:Help]]

Latest revision as of 19:39, 26 September 2012

This page lists all map IDS used in MIPAV to connect software dialogs with MIPAV wiki pages.

Note that the full page URL contains the following prefix - http://mipav.cit.nih.gov/pubwiki/index.php/ which should be added to the topic URL.


Map IDs used

MAP ID Algorithm URL TOPIC NAME
(WIKI link)		 Needs cleaning/writing?
MS00001 PlugInMuscleImageDisplay N/A N/A need to write
MS00050 PlugInMuscleImageDisplay542a N/A N/A need to write
10052 Microscopy>Colocalization> Orthogonal: Applying the algorithm Microscopy_Colocalization_Orthogonal_Regression#Applying_the_algorithm Microscopy Colocalization Orthogonal Regression NO
10308 DICOM Posing_queries_and_retrieving_images Posing queries and retrieving images NO
10309 DICOM Receiving_and_sending_image_files Receiving and sending image files NO
10305 DICOM Sending_and_retrieving_DICOM_images#Creating.2C_editing.2C_and_deleting_servers Creating, editing, and deleting servers NO
10304 DICOM Sending_and_retrieving_DICOM_images#Setting_up_the_hosts_table Setting up the hosts table NO
19050 2D Histogram 2D_Histogram 2D Histogram NO
10046 Registration: Manual 2D Series Registration:_Manual_2D_Series Registration: Manual 2D Series NO
10047 Registration: Manual 2D Series: Applying the algorithm Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2D_images Applying the Manual 2D Series algorithm on 2D images NOT USED
19060 Registration: Manual 2D Series: Blended tab Registration:_Manual_2D_Series#Blended_tab Blended tab NOT USED
19062 Registration: Manual 2D Series: Blended tab Registration:_Manual_2D_Series#Dual_tab Dual tab NOT USED
19064 Registration: Manual 2D Series: Applying the Manual 2D Series algorithm to 2.5D images Registration:_Manual_2D_Series#Applying_the_Manual_2D_Series_algorithm_on_2.5_images Applying the Manual 2D Series algorithm on 2.5 images NOT USED
U4009 MIPAV Utilities: Add Image Margins Adding_image_margins Adding image margins NO
U4003 MIPAV Utilities: Extract 3d subset 4_D_tools#Extracting_3D_subset_from_4D 4 D tools#Extracting 3D subset from 4D NO
10506 MIPAV Utilities: Contouring structures interactively Segmenting_Images_Using_Contours_and_Masks:_Using_contours_to_segment_a_VOI Contouring Structures Interactively NO
10029 Histogram Equalization: Regional Adaptive: Applying the algorithm Histogram_Equalization:_Regional_Adaptive Applying Histogram Equalization Regional Adaptive NO
10051 Histogram Equalization: Applying the neighborhood adaptive algorithm Histogram_Equalization:_Neighborhood_Adaptive Applying the neighborhood adaptive algorithm NO
10007 Filters (Spatial): Anisotropic Diffusion: Applying the algorithm Filters_(Spatial)_Anisotropic_Diffusion#Applying_the_Anisotropic_Diffusion_algorithm Filters (Spatial) Anisotropic Diffusion- Applying the algorithm NO
Autocor001 Autocorrelation coefficients Autocorrelation_Coefficients Applying Autocorrelation Coefficients NO
Autocovar01 Autocovariance coefficients Autocovariance_Coefficients Applying Autocovariance Coefficients NO
Barr010 Barrel distortion correction Barrel_Distortion_Correction Barrel Distortion Correction NO
Mor001 Morphology: Background Distance map Morphology#Background_Distance_map Morphology#Background Distance map NO
Mor010FE Morphology: Apply find Edges Morphology#Find_Edges Morphology#Find_Edges NO
10090 Extract Brain: Extract Brain Surface (BSE) Extract_Brain:_Extract_Brain_Surface_(BSE) Applying BSE NO
Smooth01 Smooth VOI Modifying_Contours#Smooth_VOI Modifying Contours#Smooth VOI NO
10506 Contouring structures interactively Segmenting_Images_Using_Contours_and_Masks:_Using_contours_to_segment_a_VOI#Contouring_structures_interactively Segmenting Images Using Contours and Masks: Using contours to segment a VOI#Contouring structures interactively NO
U4070 Utilities: Image Calculator-Bulk Images Image_Calculator:_Advanced_image_calculator_options#Image_Calculator-Bulk_Images Image Calculator: Advanced image calculator options#Image Calculator-Bulk Images NO
CMCR001 Circle to Rectangle algorithm Transform:_Conformal_Mapping_Algorithms#Applying_the_Circle_to_Rectangle_algorithm Transform: Conformal Mapping Algorithms#Applying the Circle to Rectangle algorithm YES
CMSR001 Circular Sector to Rectangle Transform:_Conformal_Mapping_Algorithms#Applying_the_Circular_Sector_to_Rectangle_algorithm Transform: Conformal Mapping Algorithms#Applying the Circular Sector to Rectangle algorithm YES
Mor005Cl1 Morphology: Close: Applying the closing Morphology#Applying_the_closing Morphology#Applying the closing NO
Mor002Dil Morphology: Dilation Morphology#Dilate Morphology#Dilate NO
10086 Filters (Spatial): Coherence-Enhancing Diffusion Filters_(Spatial):_Coherence-Enhancing_Diffusion#Applying_the_Coherence-Enhancing_Diffusion_algorithm Filters (Spatial): Coherence-Enhancing Diffusion#Applying the Coherence-Enhancing Diffusion algorithm NO
U4049 Utilities: Concatenate Images Slice_tools#Concatenating_images Slice tools#Concatenating images NO
U4001 Utilities: Convert from 3D to 4D 4_D_tools#Converting_3D_to_4D_images_and_vise_versa 4 D tools#Converting 3D to 4D images and vise versa NO
U4008 Utilities: Convert 4D to RGB 4_D_tools#Convert_4D_to_RGB 4 D tools#Convert 4D to RGB NO
U4013 Utilities: Convert image types Converting_image_datasets_to_different_data_types Converting image datasets to different data types NO
U4019 Utilities: DICOM: Save range of slices Converting_non-DICOM_image_files_to_DICOM_format#Save_Range_of_Slices_dialog_box Converting non-DICOM image files to DICOM format#Save Range of Slices dialog box NO
U4021 Utilities: Crop Cropping_images Cropping images NO
U4023 Utilities: Crop boundary pixels Cropping_images#Crop_Boundary_Pixels Cropping images#Crop Boundary Pixels NO
U4035 Utilities: Invert Image Inverting_the_image Inverting the image NO
U4039 Utilities: Additive noise Adding_noise_to_images Adding noise to images NO
OAR19076 Optimized Automatic Registration dialog box Optimized_automatic_registration_3D#Optimized_Automatic_Registration_dialog_box_options Optimized automatic registration 3D#Optimized Automatic Registration dialog box options NO
OAR19078 Optimized Automatic Registration: Advanced OAR settings dialog box Optimized_automatic_registration_3D#Advanced_OAR_settings_for_Constrained_Optimized_Automatic_Registration_3D Optimized automatic registration 3D#Advanced OAR settings for Constrained Optimized Automatic Registration 3D NO
ISPImages01 N/A N/A N/A N/A
10003 Fast Fourier Transformation (FFT): Applying the FFT algorithm Fast_Fourier_Transformation_(FFT)#Applying_the_FFT_algorithm Fast Fourier Transformation (FFT)#Applying the FFT algorithm NO
Mor006Del Morphology: Apply Delete Objects Morphology#Applying_the_Delete_algorithm Morphology#Applying the Delete algorithm NO
U4018 Utilities: To save DICOM images as XMl files Correcting_image_spacing#To_save_DICOM_images_as_XML_files Correcting image spacing#To save DICOM images as XML files YES (some images are lost)
10067 Subsampling images (Subsample command) Subsampling_images Subsampling images NO
10023 Filters (Spatial): Slice Averaging: Applying the algorithm Filters_(Spatial):_Slice_Averaging Filters (Spatial): Slice Averaging NO
U4029 Image Calculator Image_Calculator Image Calculator NO
Mor014Skel Morphology: Apply Skeletonize Morphology#Applying_the_algorithm Morphology#Applying the algorithm NO
Edge022 Edge Detection:EdgeNMSuppression dialog box Edge_Detection:_Zero_X_Non-Maximum_Suppression#Applying_the_Zero_X_Non-Maximum_Suppression_algorithm Edge Detection: Zero X Non-Maximum Suppression#Applying the Zero X Non-Maximum Suppression_algorithm NO
U4017 Utilities:RGB->Gray Converting_image_datasets_to_different_data_types#Converting_RGB_datasets_to_grayscale_datasets Converting image datasets to different data types#Converting RGB datasets to grayscale datasets NO
19014 Face Anonymizer (BET) Face_Anonymizer_(BET)#Applying_the_Face_Anonymizer_Algorithm Face Anonymizer (BET)#Applying the Face Anonymizer Algorithm NO
19018 Registration: B-Spline Automatic Registration 2D/3D -- Two-Pass User_Dialogs_in_MIPAV#B-Spline_Two_-_Pass_Automatic_Registration_2.5D_dialog_box User Dialogs in MIPAV#B-Spline Two - Pass Automatic Registration 2.5D dialog box NO
19016 Registration: B-Spline Automatic Registration 2D/3D -- Single-Pass User_Dialogs_in_MIPAV#B-Spline_Single_-_Pass_Automatic_Registration_2D.2F3D_dialog_box User Dialogs in MIPAV#B-Spline Single - Pass Automatic Registration 2D.2F3D dialog box NO
19022 Registration: B-Spline Automatic Registration 2.5D -- Two-Pass User_Dialogs_in_MIPAV#B-Spline_Two_-_Pass_Automatic_Registration_2.5D_dialog_box User Dialogs in MIPAV#B-Spline Two - Pass Automatic Registration 2.5D dialog box NO
19020 Registration: B-Spline Automatic Registration 2.5D -- Single-Pass User_Dialogs_in_MIPAV#B-Spline_Single_-_Pass_Automatic_Registration_2.5D_dialog_box User Dialogs in MIPAV#B-Spline Single - Pass Automatic Registration 2.5D dialog box NO
10095 Microscopy: FRET Bleed Through Microscopy:_Fluorescent_Resonance_Energy_Transfer_(FRET)_Bleed_Through_and_Efficiency#FRET_Bleed_Through_dialog_box Microscopy: Fluorescent Resonance Energy Transfer (FRET) Bleed Through and Efficiency#FRET Bleed Through dialog box NO
10247 Customizing MIPAV Customizing_MIPAV Customizing MIPAV NO
10033 Registration: Landmark-TPSpline: Applying the algorithm Registration:_Landmark-TPSpline#Applying_the_Registration:_Landmark-TPSpline_algorithm Registration: Landmark-TPSpline#Applying the Registration: Landmark-TPSpline algorithm NO
Mor003Er1 Applying the erosion Morphology#Applying_the_erosion Morphology#Applying the erosion NO
WShed10 Segmentation>Watershed Watershed Watershed NO
10088 Filters (Spatial): Regularized Isotropic Diffusion: Applying the algorithm Filters_(Spatial):_Regularized_Isotropic_(Nonlinear)_Diffusion#Applying_Regularized_Isotropic_.28Nonlinear.29_Diffusion Filters (Spatial): Regularized Isotropic (Nonlinear) Diffusion#Applying Regularized Isotropic .28Nonlinear.29 Diffusion NO
GroupStat001 N/A N/A N/A
Haral1001 N/A N/A N/A
Mor004OP1 Morphology: Applying the opening Morphology#Open Morphology#Open NO
19010 Histogram Matching Histogram_Matching#Applying_the_Histogram_Matching_algorithm Histogram Matching#Applying the Histogram Matching algorithm NO
19054 Histogram Tools: Histogram Two Dimensional - Color images dialog 2D_Histogram#Applying_the_2D_Histogram_algorithm_to_color_images 2D Histogram#Applying the 2D Histogram algorithm to color images NO
19052 Histogram Tools: Histogram Two Dimensional - Grayscale images dialog 2D_Histogram#Applying_the_2D_Histogram_algorithm_to_grayscale_images 2D Histogram#Applying the 2D Histogram algorithm to grayscale images NO
U4053 Utilities:Insert missing slices Slice_tools#Insert_Missing_Slices Slice tools#Insert Missing Slices NO
U4055 Utilities:Insert slice Slice_tools#Applying_insert_missing_slices Slice tools#Applying insert missing slices NO
U4059 Utilities:Remove slices Inserting_slices_into_image_datasets#Removing_images_.28slices.29_from_datasets Inserting slices into image datasets#Removing images .28slices.29 from datasets NO
PT0007 Paint Power Tools dialog box Segmenting_Images_Using_Contours_and_Masks:_Advanced_paint_and_Power_Paint_tools Segmenting Images Using Contours and Masks: Advanced paint and Power Paint tools NO
10011 Filters (Spatial): Gradient Magnitude: Applying the algorithm Filters_(Spatial):_Gradient_Magnitude#Applying_the_Gradient_Magnitude_algorithm Filters (Spatial): Gradient Magnitude#Applying the Gradient Magnitude algorithm NO
Mor011IDO Morphology: Apply ID Objects Morphology#ID_objects Morphology#ID objects NO
10026 Fuzzy C-Means: Multispectral and Single Channel Algorithms Fuzzy_C-Means:_Multispectral_and_Single_Channel_Algorithms Fuzzy C-Means: Multispectral and Single Channel Algorithms NO
HoughCircle002 Hough Transform Hough_Transform#Running_the_Hough_Transform_for_Circle_Detection_algorithm Hough Transform#Running the Hough Transform for Circle Detection algorithm NO
HoughLine001 Hough Transform: Line Hough_Transform#Running_the_Hough_Transform_for_Line_Filing_algorithm Hough Transform#Running the Hough Transform for Line Filing algorithm NO
HoughPar004 Hough Transform: Parabola Hough_Transform#Running_the_Hough_Transform_for_Parabola_Detection_algorithm Hough Transform#Running the Hough Transform for Parabola Detection algorithm NO
HoughHyperbola001 Hough Transform: Hyperbola N/A N/A NOT USED
10083 Microscopy: FRAP Microscopy:_FRAP_(Fluorescence_Recovery_After_Photobleaching)#Applying_the_FRAP_algorithm Microscopy: FRAP (Fluorescence Recovery After Photobleaching)#Applying the FRAP algorithm NO
Hist010Cum Cumulative Histogram Cumulative_Histogram#Applying_Cumulative_Histogram_algorithm_to_images Cumulative Histogram#Applying Cumulative Histogram algorithm to images NOT USED
U4041 Utilities: Pad Pad Pad NO
10034 Reslice-Isotropic Voxels Reslice-Isotropic_Voxels Reslice-Isotropic Voxels NO
Mor008ES Morphology: Apply Evaluate Segmentation Morphology#Applying_evaluate_segmentation Morphology#Applying evaluate segmentation NO
Mor009FH Morphology: Apply Fill Holes Morphology#Applying_fill_holes Morphology#Applying fill holes NO
ISPImages01 N/A N/A N/A NO
Edge020 Edge Detection: Edge Laplacian dialog box Edge_Detection:_Zero_X_Laplacian Edge Detection: Zero X Laplacian NO
Edge022 Edge Detection: EdgeNMSuppression dialog box Edge_Detection:_Zero_X_Non-Maximum_Suppression#Applying_the_Zero_X_Non-Maximum_Suppression_algorithm Edge Detection: Zero X Non-Maximum Suppression#Applying the Zero X Non-Maximum Suppression algorithm NO
19003 Microscopy: Blind Deconvolution algorithm Microscopy:_Blind_Deconvolution#Applying_the_Maximum_Likelihood_Iterative_Blind_Deconvolution_algorithm Microscopy: Blind Deconvolution#Applying the Maximum Likelihood Iterative Blind Deconvolution algorithm NO
10045 Extract Brain Surface: Applying the algorithm Extract_Brain:_Extract_Brain_Surface_(BET) Extract Brain: Extract Brain Surface (BET) NO
U4043 Utilities: Quantify Mask Quantify_Mask Quantify Mask NO
U4033 Utilities: Image Math Image_Math Image Math NO
U4037 Utilities: Match Images Matching_images Matching images NO
U4025 Utilities: Fill image Masking_(filling)_images Masking (filling) images NO
U4027 Utilities: Flip Image Flipping_images Flipping images NO
U4045 Utilities: Replace Pixel/Voxel Value Replacing_pixel/voxel_value_in_images Replacing pixel/voxel value in images NO
10009 Filters (Spatial): Gaussian Blur: Applying the algorithm [[Filters_(Spatial):_Gaussian_Blur Filters (Spatial): Gaussian Blur]] NO
19040 Transformation tools: Transnform to Power of 2, Resample dialog Transform_to_power_of_2#Resample_dialog_box Transform to power of 2#Resample dialog box NO
CMNCC001 Transform: Conformal Mapping Algorithms:Nearly Circle to Circle algorithm Transform:_Conformal_Mapping_Algorithms#Applying_the_Nearly_Circle_to_Circle_algorithm Transform: Conformal Mapping Algorithms#Applying the Nearly Circle to Circle algorithm YES
CMSR001 Transform: Conformal Mapping Algorithms:Circular Sector to Rectangle Transform:_Conformal_Mapping_Algorithms#Circular_Sector_to_Rectangle Transform: Conformal Mapping Algorithms#Circular Sector to Rectangle YES
CMEC001 Transform: Conformal Mapping Algorithms:Ellipse to Circle algorithm Transform:_Conformal_Mapping_Algorithms#Transformation:_Ellipse_to_Circle Transform: Conformal Mapping Algorithms#Transformation: Ellipse to Circle NOT USED
CMCR001 Transform: Conformal Mapping Algorithms:Circle to Rectangle algorithm Transform:_Conformal_Mapping_Algorithms#Applying_the_Circle_to_Rectangle_algorithm Transform: Conformal Mapping Algorithms#Applying the Circle to Rectangle algorithm YES
10703 Creating scripts Using_Scripts_(Macros)_in_MIPAV Using Scripts (Macros) in MIPAV NO
10093 Filters (Spatial): Mode: Applying the algorithm Filters_(Spatial):_Mode#Applying_the_Mode_algorithm Filters (Spatial): Mode#Applying the Mode algorithm` NO
MS00001 Applying the Muscle Segmentation algorithm Muscle_Segmentation#Applying_the_algorithm Muscle Segmentation#Applying the algorithm YES
MS00050 Muscle Segmentation:Abdomen tab Muscle_Segmentation#Applying_the_algorithm Muscle Segmentation#Applying the algorithm YES
MS00040 Muscle Segmentation:Analysis tab Muscle_Segmentation#Applying_the_algorithm Muscle Segmentation#Applying the algorithm YES
MS00080 Muscle Segmentation:Analysis tab Muscle_Segmentation#Applying_the_algorithm Muscle Segmentation#Applying the algorithm YES
102572 Annotation dialog box Creating_new_images#Annotating_images_with_text Creating new images#Annotating images with text NO
QS5020 Annotation dialog box Creating_new_images#Annotating_images_with_text Creating new images#Annotating images with text NOT USED (2 IDS for the same topic)
19001 Extract Surface (Marching Cubes) Algorithm Extract_Surface_(Marching_Cubes)#Applying_the_Extract_Surface_Algorithm Extract Surface (Marching Cubes)#Applying the Extract Surface Algorithm NO
10017 Filters (Spatial): Median: Applying the algorithm Filters_(Spatial):_Median#Applying_the_Median_Filter_algorithm Filters (Spatial): Median#Applying the Median Filter algorithm NO
10015 Filters (Spatial): Mean: Applying the algorithm Filters_(Spatial):_Mean#Applying_the_Mean_algorithm Filters (Spatial): Mean#Applying the Mean algorithm NO
ISPImages01 NDAR N/A N/A N/A
19074 Segmentation:Threshold Threshold Threshold NO
10091 Quick Start: To allocate more memory Allocating_Memory_in_MIPAV Allocating Memory in MIPAV NO
10715 Quick Start: To run scripts from the File menu (group mode) Running_scripts Running scripts NO
10097 Microscopy: FRET Efficiency) Microscopy:_Fluorescence_Resonance_Energy_Transfer_(FRET)-Acceptor#Applying_the_FRET_algorithm Microscopy: Fluorescence Resonance Energy Transfer (FRET)-Acceptor#Applying the FRET algorithm NO
10079 Utilities:Removing images (slices) from datasets (Remove Slices command) Inserting_slices_into_image_datasets#Removing_images_.28slices.29_from_datasets Inserting slices into image datasets#Removing images .28slices.29 from datasets NO
10231 Calculating VOI statistics Calculating_statistics_on_VOI_groups Calculating statistics on VOI groups NO
GroupStat001 Calculating VOI statistics Calculating_statistics_on_VOI_groups Calculating statistics on VOI groups NO
10025 Filters (Spatial): Unsharp Mask: Applying the algorithm Filters_(Spatial):_Unsharp_Mask Filters_(Spatial):_Unsharp_Mask NO
A3001 Histogram summary Histogram_summary Histogram summary NO
13010 Talairach Transform dialog box Mapping_Brains_in_Talairach_Space Mapping Brains in Talairach Space NO
10013 Filters (Spatial): Laplacian: Applying the algorithm Filters_(Spatial)_Laplacian#Applying_the_Laplacian_algorithm Filters (Spatial) Laplacian#Applying the Laplacian algorithm NO
10019 Filters (Spatial): Nonlinear Noise Reduction: Applying the algorithm Filters_(Spatial):_Nonlinear_Noise_Reduction#Applying_the_algorithm Filters (Spatial): Nonlinear Noise Reduction#Applying the algorithm NO
StDev001 Standard Deviation Threshold: Applying the algorithm to grayscale images Standard_Deviation_Threshold#Applying_the_algorithm_to_grayscale_images Standard Deviation Threshold#Applying the algorithm to grayscale images NO
StDev005 Standard Deviation Threshold: Applying the algorithm to RGB images Standard_Deviation_Threshold#Applying_the_algorithm_to_grayscale_images Standard Deviation Threshold#Applying the algorithm to RGB images NO
U4031 Utilities: Image Calculator: Enter Advanced Operator dialog box Image_Calculator:_Advanced_image_calculator_options#Enter_Advanced_Operator_dialog_box Image Calculator: Advanced image calculator options#Enter Advanced Operator dialog box NO
U4063 Utilities: Subtract VOI Background Subtract_VOI_Background Subtract VOI Background NO
PT0003 Paint tools: Multiple paint tools dialog box Segmenting_Images_Using_Contours_and_Masks:_Advanced_paint_and_Power_Paint_tools#Multiple_Paint_Tools_dialog_box_options Segmenting Images Using Contours and Masks: Advanced paint and Power Paint tools#Multiple Paint Tools dialog box options NO
Mor007DM Morphology: Apply Distance map Morphology#Distance_Map Morphology#Distance Map NO
19006 Shading Correction Inhomogeneity N3 Correction applying Shading_Correction:_Inhomogeneity_N3_Correction#Applying_the_Inhomogeneity_N3_algorithm Shading Correction: Inhomogeneity N3 Correction#Applying the Inhomogeneity N3 algorithm NO

More MapIDs used

These MAP IDs were under "MapIDs used, but no wiki:", but I either figure out the corresponding pages for these IDs, or created stub pages.

MAP ID Algorithm URL TOPIC NAME
(WIKI link)		 Needs cleaning/writing?
102572 Annotation dialog box Creating_new_images#To_annotate_images_with_text: Creating new images#To annotate images with text: NO
Transform010 Transforming images Transform Transform YES
DTI00010 DTI: Create List File DTI:_Create_List_File DTI: Create List File YES
CrMPmaps001 PlugInDialogNEIRetinalRegistration NEIRetinalRegistration NEIRetinalRegistration NO
AnMPmaps002 NEIRetinalRegistration NEIRetinalRegistration NEIRetinalRegistration NO
10021 Filters (Spatial): Nonmaximum Suppression: Applying the algorithm Filters_(Spatial):_Nonmaximum_Suppression#Applying_the_Nonmaximum_Suppression_algorithm Filters (Spatial): Nonmaximum Suppression#Applying the Nonmaximum Suppression algorithm NO
PaintGrow001 Creating a mask using the paint grow segmentation method Creating_a_mask_using_the_Paint_Grow_Segmentation_method Creating a mask using the Paint Grow Segmentation method NO
10526 Creating a mask using the paint grow segmentation method Creating_a_mask_using_the_Paint_Grow_Segmentation_method Creating a mask using the Paint Grow Segmentation method This is a MAP ID from File:MAP IDs.pdf
Mor012PA Apply Particle Analysis Morphology#Applying_particle_analysis Morphology#Applying particle analysis NO
10040 Registration: Landmark—Least Squares Registration:_Landmark-Least_Squares Registration: Landmark-Least Squares NO
U4005 Remove time volumes 4_D_tools#Removing_time_volumes 4 D tools#Removing time volumes NO
U4015 Concatenate-> RGB Converting_image_datasets_to_different_data_types#Concatenate-RGB Converting image datasets to different data types#Concatenate-RGB NO
TransNon10 Transformation tools: Transnform nonlinear Transform_nonlinear Transform nonlinear YES
Mor015UE Apply Ultimate Erode Morphology#Ultimate_erode Morphology#Ultimate erode NO
WThresh01 Applying the Wavelet Thresholding algorithm Filters_(Wavelet):_Thresholding Filters (Wavelet): Thresholding NO
HoughEllipse003 Hough Transform for Ellipse Detection Hough_Transform#Running_the_Hough_Transform_for_Ellipse_Detection_algorithm Hough Transform#Running the Hough Transform for Ellipse Detection algorithm NO
U4051 Utilities: Extract slices/volumes Slice_tools#Extracting_slices_and_volumes Slice tools#Extracting slices and volumes NO
FilFr010 Fiters Frequency Filters_(Frequency) Filters (Frequency) NO
10096 Microscopy: FRET Bleed Through: Applying the Algorithm Microscopy:_Fluorescent_Resonance_Energy_Transfer_(FRET)_Bleed_Through_and_Efficiency#Applying_the_FRET_Bleed_Through_algorithm Microscopy: Fluorescent Resonance Energy Transfer (FRET) Bleed Through and Efficiency#Applying the FRET Bleed Through algorithm NO
Haral1001 Filters (Spatial): Haralick Texture Filters_(Spatial):_Haralick_Texture Filters (Spatial): Haralick Texture YES

MAP IDs in File:MAP IDs.pdf

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