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  1. MIPAV change list 5.x.x
  2. MIPAV change list pre-1.0
  3. MIPAV class
  4. MIPAV feature list
  5. Main Page
  6. Making a MIPAV Algorithm JISTable
  7. Making a MIPAV Algorithm Scriptable
  8. Mapping Brains in Talairach Space
  9. Matrix, Plot, LUT, VOI and Surface files
  10. Maximum Intensity Projection
  11. Modifying Contours
  12. MuscleSegmentation plugin
  13. Muscle Segmentation problems at UCSD
  14. Pad
  15. Planning scripts
  16. Plug-in CT MD, a typical plug-in program
  17. Plug-in CT MD.java
  18. PlugInAlgorithmCT MD.java
  19. PlugInDialogCT MD.java
  20. PlugIn Algorithm Median
  21. PlugIn Algorithm Median (con't)
  22. PlugIn Algorithm Median (con't, part 2)
  23. PlugIn Algorithm Median (con't, part 3)
  24. PlugIn Algorithm Median (con't, part 4)
  25. Preface
  26. Recording scripts
  27. Recording utilities usage with the history feature
  28. References
  29. Rotating images
  30. Saving a history of actions on images
  31. Scope of this guide
  32. Segmenting Images Using Contours and Masks:Converting VOI contours to masks
  33. Segmenting Images Using Contours and Masks: Converting masks to VOI contours and paints
  34. Segmenting Images Using Contours and Masks: Generating Masks
  35. Segmenting Images Using Contours and Masks: Using contours to segment a VOI
  36. Select Algorithms and Brain Tools for Talairach Transform
  37. Setting up scripting
  38. Skills you need to perform tasks in MIPAV
  39. Standard tasks provided through commands on the Utilities menu
  40. Subversion topics
  41. Supported utilities
  42. TRE Scripts
  43. Task 1, Performing a semimanual transformation on datasets to the Talairach coordinate system
  44. Task 2, Applying Talairach VOIs
  45. Task 3, Segmenting the original image
  46. Task 4, Transforming Talairach image and Talairach VOIs-1 to the original image
  47. Task 5, Copying Talairach VOIs to segmented images
  48. Task 6, Calculating statistics on VOIs
  49. Technical Information
  50. The SRB tab of the MIPAV options dialog box

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