Package gov.nih.mipav.view

Class ViewJFramePaintVasculature

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Window

java.awt.Frame

javax.swing.JFrame

gov.nih.mipav.view.ViewJFrameBase

gov.nih.mipav.view.ViewJFramePaintVasculature

All Implemented Interfaces:

ViewImageUpdateInterface, java.awt.event.ActionListener, java.awt.event.ComponentListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.event.ChangeListener, javax.swing.RootPaneContainer, javax.swing.WindowConstants

public class ViewJFramePaintVasculature
extends ViewJFrameBase

Generates a MIP image from a 3D volume. When the user clicks on a pixel of the MIP, a region grow is performed starting at the point where the clicked intensity occurs.

Rotation of the volume to take different MIPs is something that might be useful to add (it's been partially added (see the MIP menu), but it is untested..).

Not tested with color images... probably won't work.

Right now, the MIP and the volume partially share the same LUT.

Author:

Evan McCreedy

See Also:

ViewJFrameImage, Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JFrame

javax.swing.JFrame.AccessibleJFrame

Nested classes/interfaces inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Nested classes/interfaces inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field	Description
protected ViewJComponentEditImage	componentImage	Display of the MIP image.
protected int	fudgeFactor	Frame adjustment to keep the frame from being just small enough for the ScrollPane to display the scroll bars.
protected float	heightResFactor	Storage for correction parameters where datasets have non isotropic values.
protected float[]	imageBuffer	Buffer used to store image intensities the presently viewed slice of image.
protected boolean	logMagDisplay	Flag indicating whether or not that the image should be displayed in Log scale.
protected float[]	mipBuffer	Buffer to store the MIP image that results from the raytrace.
protected int[]	mipExtents	The dimensions of the MIP image.
protected ModelImage	mipImage	MIP image generated from the volume.
protected java.util.Hashtable<java.lang.Integer,java.lang.Float>	mipZTable	Table which holds the z coordinate on the 3D volume for a point (x,y) on the 2D MIP image.
protected JDialogPaintVasculature	paintDialog	Dialog to facilitate vasculature painting.
protected ViewJFrameBase	parent	Parent frame of this frame.
protected int[]	pixBuffer	Integer buffer (4 bytes that stores the concatenated Alpha (1 byte), Red (1 byte), Green ( 1 byte ), Blue (1 byte ) data.
protected float[]	resols	Storage of the image voxel resolutions.
private javax.swing.JScrollPane	scrollPane	The scrollPane where the image is displayed.
protected VOI	seedPoints	VOI containing the possible seed points.
private static long	serialVersionUID	Use serialVersionUID for interoperability.
protected int[]	units	Storage of the resolution units of measure.
protected float	widthResFactor	Storage for correction parameters where datasets have non isotropic values.
protected int	xScreen	Width of the display screen.
protected int	yScreen	Height of the display screen.
protected float	zoom	Defaults magnification of image to 1.

Fields inherited from class gov.nih.mipav.view.ViewJFrameBase

absoluteGoToButton, absoluteGoToPanel, absoluteLabel, absoluteLabelVals, absolutePanel, absoluteXLabel, absoluteXTextField, absoluteYLabel, absoluteYTextField, absoluteZLabel, absoluteZTextField, alphaBlend, defaultLUTa, defaultLUTb, displayMode, IMAGE_A, IMAGE_A_B, IMAGE_B, imageA, imageB, isClosing, linkedScrolling, linkFrame, linkTriFrame, LUTa, LUTb, progressBar, scannerLPS_APLabel, scannerLPS_APTextField, scannerLPS_GoToButton, scannerLPS_GoToPanel, scannerLPS_ISLabel, scannerLPS_ISTextField, scannerLPS_RLLabel, scannerLPS_RLTextField, scannerLPSLabel, scannerLPSLabelVals, scannerLPSPanel, scannerRAS_APLabel, scannerRAS_APTextField, scannerRAS_GoToButton, scannerRAS_GoToPanel, scannerRAS_ISLabel, scannerRAS_ISTextField, scannerRAS_RLLabel, scannerRAS_RLTextField, scannerRASLabel, scannerRASLabelVals, scannerRASPanel, scannerTabbedPane, tabbedPane, talGoToButton, talGoToPanel, talXLabel, talXTextField, talYLabel, talYTextField, talZLabel, talZTextField, userInterface, zoomMode

Fields inherited from class javax.swing.JFrame

accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Frame

CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, HAND_CURSOR, ICONIFIED, MAXIMIZED_BOTH, MAXIMIZED_HORIZ, MAXIMIZED_VERT, MOVE_CURSOR, N_RESIZE_CURSOR, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, SW_RESIZE_CURSOR, TEXT_CURSOR, W_RESIZE_CURSOR, WAIT_CURSOR

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants

DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors

Constructor	Description
ViewJFramePaintVasculature(ModelImage img, ModelLUT lut, java.awt.Dimension loc, ViewJFrameBase frame)	Constructs the MIP frame and pops up the region grow dialog.

Method Summary

Modifier and Type	Method	Description
void	actionPerformed(java.awt.event.ActionEvent event)	Listen for events from the MIP frame GUI.
void	calcMIPBuffer(int firstDim, int secondDim, int thirdDim)	Generates a MIP image from the volume.
void	close()	Closes window and disposes of frame and component.
void	componentResized(java.awt.event.ComponentEvent event)	Resizes frame and all components.
protected static double	distance(WildMagic.LibFoundation.Mathematics.Vector3f pt1, WildMagic.LibFoundation.Mathematics.Vector3f pt2)	Calculates the 3D euclidian distance between two points.
void	finalize()	Cleans memory.
void	findSeedPoints(int val)	Mark all points within the image which match a certain intensity with point VOIs.
ViewJComponentEditImage	getComponentImage()	Returns the reference to the component image.
ViewControlsImage	getControls()	Placeholder.
ModelImage	getImageA()	Returns the reference to mipImage.
ModelImage	getImageB()	Deprecated. DOCUMENT ME!
float	getMIPZValue(int index)	Gets the Z value where a pixel in the MIP image occurred in the volume.
ViewJFrameBase	getParentFrame()	Get the parent frame of this MIP image frame.
ModelRGB	getRGBTA()	Gets the RGB LUT table for ARGB image A.
ModelRGB	getRGBTB()	Deprecated. DOCUMENT ME!
VOI	getSeedPoints()	Return the points that have been marked on the MIP as possible seed points.
private void	initComponentImage()	Construct the component image which contains the MIP image (should be called after calcMIPBuffer).
void	initFrame(java.awt.Dimension loc)	Initializes the 2D MIP image frame.
void	removeControls()	Placeholder.
void	setActiveImage(int val)	Deprecated. DOCUMENT ME!
void	setAlphaBlend(int val)	Deprecated. DOCUMENT ME!
void	setControls()	Placeholder.
void	setEnabled(boolean flag)	Controls whether or not the images/VOIs of the frame can be modified.
void	setImageB(ModelImage imB)	Deprecated. DOCUMENT ME!
void	setLUTa(ModelLUT LUT)	Sets the LUT for image A.
void	setPaintBitmapSwitch(boolean val)	Deprecated. DOCUMENT ME!
void	setRGBTA(ModelRGB RGBT)	Sets the RGB LUT table for ARGB image A.
void	setRGBTB(ModelRGB val)	Deprecated. DOCUMENT ME!
void	setSlice(int val)	Deprecated. DOCUMENT ME!
void	setTimeSlice(int val)	Deprecated. DOCUMENT ME!
void	setTitle()	Sets the title of the frame with the image name of slice location.
void	updateFrame(float sX, float sY)	Updates the this frame's size the compnents sizes.
boolean	updateImageExtents()	This methods calls the componentImage's REPAINT method to redraw the screen.
boolean	updateImages()	This methods calls the componentImage's update method to redraw the screen - fastest of the three update methods.
boolean	updateImages(boolean forceShow)	This methods calls the componentImage's update method to redraw the screen.
boolean	updateImages(ModelLUT _LUTa, ModelLUT _LUTb, boolean forceShow, int interpMode)	This methods calls the componentImage's update method to redraw the screen.
void	windowClosing(java.awt.event.WindowEvent event)	Closes window and disposes of frame and component.

Methods inherited from class gov.nih.mipav.view.ViewJFrameBase

about, buildLabelPanel, canCloseImageBAfterLoad, close, closeImageB, componentHidden, componentMoved, componentShown, getAlphaBlend, getDefaultLUTa, getDefaultLUTb, getDisplayMode, getImageNameA, getImageNameB, getLastState, getLUTa, getLUTb, getTriImg, getUserInterface, handleMaskPopupMenu, handlePaintToMaskPopupMenu, handleZoomPopupMenu, initExtents, initImageBuffer, initLUT, initNumSlices, initPixelBuffer, initResFactor, initResolutions, initRGB, initSlicePositions, initUnits, initZoom, loadAllVOIs, loadAllVOIsFrom, loadImage, loadLUT, loadLUTandTransferFunctionFrom, loadLUTandTransferFunctionFrom, makeString, newFrameBeenCreated, openVOI, openVOI, pickImageFile, save, save, save, saveAllVOIs, saveAllVOIsTo, saveLabels, saveLUT, saveLUTandTransferFunction, saveLUTandTransferFunction, saveLUTAs, saveLUTAs, saveVOI, saveVOIAs, saveVOIAs, saveVOIIntensities, saveVOIIntensitiesTo, setAbsPositionLabels, setEnableCloseImageBAfterLoad, setImageA, setLastState, setLinkedFrame, setLinkedTriFrame, setLUTb, setLUTs, setMessageText, setOpacityInfo, setpaintBitmap, setScannerPosition, stateChanged, windowActivated, windowClosed, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JFrame

addImpl, createRootPane, frameInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setIconImage, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Frame

addNotify, getCursorType, getExtendedState, getFrames, getIconImage, getMaximizedBounds, getMenuBar, getState, getTitle, isResizable, isUndecorated, remove, removeNotify, setBackground, setCursor, setExtendedState, setMaximizedBounds, setMenuBar, setOpacity, setResizable, setShape, setState, setTitle, setUndecorated

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, hide, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, setVisible, show, toBack, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

serialVersionUID

private static final long serialVersionUID

Use serialVersionUID for interoperability.

See Also:

Constant Field Values

componentImage

protected ViewJComponentEditImage componentImage

Display of the MIP image.

fudgeFactor

protected int fudgeFactor

Frame adjustment to keep the frame from being just small enough for the ScrollPane to display the scroll bars. Windows seems to find an inset value needing a fudge factor of 3, but Mac OS 10 (X), doesn't, and needs a fudge factor of 7 to not require scroll bars. Either way, insets + fudge-factor must equal 7.

heightResFactor

protected float heightResFactor

Storage for correction parameters where datasets have non isotropic values.

imageBuffer

protected float[] imageBuffer

Buffer used to store image intensities the presently viewed slice of image.

logMagDisplay

protected boolean logMagDisplay

Flag indicating whether or not that the image should be displayed in Log scale. Used primarily for displaying the FFT of an image.

mipBuffer

protected float[] mipBuffer

Buffer to store the MIP image that results from the raytrace.

mipExtents

protected int[] mipExtents

The dimensions of the MIP image.

mipImage

protected ModelImage mipImage

MIP image generated from the volume.

mipZTable

protected java.util.Hashtable<java.lang.Integer,java.lang.Float> mipZTable

Table which holds the z coordinate on the 3D volume for a point (x,y) on the 2D MIP image.

paintDialog

protected JDialogPaintVasculature paintDialog

Dialog to facilitate vasculature painting.

parent

protected ViewJFrameBase parent

Parent frame of this frame.

pixBuffer

protected int[] pixBuffer

Integer buffer (4 bytes that stores the concatenated Alpha (1 byte), Red (1 byte), Green ( 1 byte ), Blue (1 byte ) data. The ARGB values are generated by using the mipImage intensities as a index into a LUT.

resols

protected float[] resols

Storage of the image voxel resolutions. One resolution value per dimension.

seedPoints

protected VOI seedPoints

VOI containing the possible seed points.

units

protected int[] units

Storage of the resolution units of measure. For example, mm, cm, inches ...

widthResFactor

protected float widthResFactor

Storage for correction parameters where datasets have non isotropic values.

xScreen

protected int xScreen

Width of the display screen.

yScreen

protected int yScreen

Height of the display screen.

zoom

protected float zoom

Defaults magnification of image to 1.

scrollPane

private javax.swing.JScrollPane scrollPane

The scrollPane where the image is displayed.

Constructor Detail

ViewJFramePaintVasculature

public ViewJFramePaintVasculature(ModelImage img,
                                  ModelLUT lut,
                                  java.awt.Dimension loc,
                                  ViewJFrameBase frame)

Constructs the MIP frame and pops up the region grow dialog.

Parameters:

img - volume to perform the MIP on

lut - LUT of the volume

loc - where to place the frame

frame - the parent frame (which must have the component image containing img)

Method Detail

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent event)

Listen for events from the MIP frame GUI.

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Specified by:

actionPerformed in class ViewJFrameBase

Parameters:

event - event triggered by GUI

calcMIPBuffer

public void calcMIPBuffer(int firstDim,
                          int secondDim,
                          int thirdDim)

Generates a MIP image from the volume.

Parameters:

firstDim - the "x" dimension of the generated MIP

secondDim - the slowest moving dimension -- the "y" dimension of the generated MIP

thirdDim - the fastest moving dimension -- the one we are finding the maximum intensity of

close

public void close()

Closes window and disposes of frame and component.

Overrides:

close in class ViewJFrameBase

componentResized

public void componentResized(java.awt.event.ComponentEvent event)

Resizes frame and all components.

Specified by:

componentResized in interface java.awt.event.ComponentListener

Overrides:

componentResized in class ViewJFrameBase

Parameters:

event - event that triggered function

finalize

public void finalize()
              throws java.lang.Throwable

Cleans memory.

Overrides:

finalize in class ViewJFrameBase

Throws:

java.lang.Throwable - if something goes wrong in the parent constructor

findSeedPoints

public void findSeedPoints(int val)

Mark all points within the image which match a certain intensity with point VOIs. If points are too close to one another in the volume, only one is marked.

Parameters:

val - the intensity value to mark

getComponentImage

public ViewJComponentEditImage getComponentImage()

Returns the reference to the component image.

Returns:

component image

getControls

public ViewControlsImage getControls()

Placeholder.

Specified by:

getControls in class ViewJFrameBase

Returns:

null

getImageA

public ModelImage getImageA()

Returns the reference to mipImage.

Specified by:

getImageA in class ViewJFrameBase

Returns:

image

getImageB

public ModelImage getImageB()

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

getImageB in class ViewJFrameBase

Returns:

the second image

getMIPZValue

public float getMIPZValue(int index)

Gets the Z value where a pixel in the MIP image occurred in the volume. Used to translate points on the MIP to points on the volume.

Parameters:

index - index into the mip buffer of the point to get ( index = x + y * xDimSize )

Returns:

z value of the point on the volume which was used for the MIP image point

getParentFrame

public ViewJFrameBase getParentFrame()

Get the parent frame of this MIP image frame.

Returns:

the parent frame (the main RFAST frame)

getRGBTA

public ModelRGB getRGBTA()

Gets the RGB LUT table for ARGB image A.

Overrides:

getRGBTA in class ViewJFrameBase

Returns:

RGBT the new RGB LUT to be applied to the image

getRGBTB

public ModelRGB getRGBTB()

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Overrides:

getRGBTB in class ViewJFrameBase

Returns:

the RGBTB data

getSeedPoints

public VOI getSeedPoints()

Return the points that have been marked on the MIP as possible seed points.

Returns:

a VOI containing the possible seed points

initFrame

public void initFrame(java.awt.Dimension loc)
               throws java.lang.OutOfMemoryError

Initializes the 2D MIP image frame.

Parameters:

loc - where the frame should be placed

Throws:

java.lang.OutOfMemoryError - if there is not enough memory available to construct the MIP window

removeControls

public void removeControls()

Placeholder.

Specified by:

removeControls in class ViewJFrameBase

setActiveImage

public void setActiveImage(int val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

setActiveImage in class ViewJFrameBase

Parameters:

val - the active image number

setAlphaBlend

public void setAlphaBlend(int val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

setAlphaBlend in class ViewJFrameBase

Parameters:

val - alpha blending value

setControls

public void setControls()

Placeholder.

Specified by:

setControls in class ViewJFrameBase

setEnabled

public void setEnabled(boolean flag)

Controls whether or not the images/VOIs of the frame can be modified.

Specified by:

setEnabled in class ViewJFrameBase

Parameters:

flag - if true the image/VOIs can be modified; if false image/VOIs can NOT be modified

setImageB

public void setImageB(ModelImage imB)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

setImageB in class ViewJFrameBase

Parameters:

imB - the second image

setLUTa

public void setLUTa(ModelLUT LUT)

Sets the LUT for image A.

Overrides:

setLUTa in class ViewJFrameBase

Parameters:

LUT - the LUT

setPaintBitmapSwitch

public void setPaintBitmapSwitch(boolean val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

setPaintBitmapSwitch in class ViewJFrameBase

Parameters:

val - whether to show the paint mask

setRGBTA

public void setRGBTA(ModelRGB RGBT)

Sets the RGB LUT table for ARGB image A.

Specified by:

setRGBTA in class ViewJFrameBase

Parameters:

RGBT - the new RGB LUT to be applied to the image

setRGBTB

public void setRGBTB(ModelRGB val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Specified by:

setRGBTB in class ViewJFrameBase

Parameters:

val - the RGBTB data

setSlice

public void setSlice(int val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Parameters:

val - the slice

setTimeSlice

public void setTimeSlice(int val)

Deprecated.

DOCUMENT ME!

Placeholder required by ViewJFrameBase.

Parameters:

val - the time slice

setTitle

public void setTitle()

Sets the title of the frame with the image name of slice location.

Specified by:

setTitle in class ViewJFrameBase

updateFrame

public void updateFrame(float sX,
                        float sY)

Updates the this frame's size the compnents sizes. If the magnified image fits into the frame that will fit into the screen then frame and image are sized appropriately. If the frame, to fit the image, exceeds the screen size the frame remains the same size and the image magnified and placed in the scroll pane.

Parameters:

sX - zoom in the x dimension

sY - zoom in the y dimension

updateImageExtents

public boolean updateImageExtents()

This methods calls the componentImage's REPAINT method to redraw the screen. The extents on this image have changed, so the extents need to be read in again and menus, panes and slide bars adjusted accordingly.

Specified by:

updateImageExtents in interface ViewImageUpdateInterface

Specified by:

updateImageExtents in class ViewJFrameBase

Returns:

whether the update was successful.

See Also:

ViewImageUpdateInterface

updateImages

public boolean updateImages()

This methods calls the componentImage's update method to redraw the screen - fastest of the three update methods.

Returns:

boolean confirming successful update

updateImages

public boolean updateImages(boolean forceShow)

This methods calls the componentImage's update method to redraw the screen. Without LUT changes.

Parameters:

forceShow - forces show to re import image and calc. java image

Returns:

boolean confirming successful update

updateImages

public boolean updateImages(ModelLUT _LUTa,
                            ModelLUT _LUTb,
                            boolean forceShow,
                            int interpMode)

This methods calls the componentImage's update method to redraw the screen.

Parameters:

_LUTa - LUT used to update imageA (and mipImage)

_LUTb - LUT used to update imageB

forceShow - forces show to re import image and calc. java image

interpMode - image interpolation method (Nearest or Smooth)

Returns:

boolean confirming successful update

windowClosing

public void windowClosing(java.awt.event.WindowEvent event)

Closes window and disposes of frame and component.

Specified by:

windowClosing in interface java.awt.event.WindowListener

Overrides:

windowClosing in class ViewJFrameBase

Parameters:

event - Event that triggered function

distance

protected static final double distance(WildMagic.LibFoundation.Mathematics.Vector3f pt1,
                                       WildMagic.LibFoundation.Mathematics.Vector3f pt2)

Calculates the 3D euclidian distance between two points.

Parameters:

pt1 - first point

pt2 - second point

Returns:

returns the distance

initComponentImage

private void initComponentImage()

Construct the component image which contains the MIP image (should be called after calcMIPBuffer).