java.lang.Object
- java.awt.Component
- - java.awt.Container
  - - java.awt.Window
    - - java.awt.Frame
      - javax.swing.JFrame
        
        gov.nih.mipav.view.ViewJFrameBase
        
        gov.nih.mipav.view.ViewJFrameHistoLUT

All Implemented Interfaces:

ViewImageUpdateInterface, java.awt.event.ActionListener, java.awt.event.ComponentListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.event.ChangeListener, javax.swing.RootPaneContainer, javax.swing.WindowConstants
```
public class ViewJFrameHistoLUT
extends ViewJFrameBase
implements java.awt.event.WindowListener, ViewImageUpdateInterface
```
Deprecated.

This class produces a frame where the user can specify a specific LUT, the number of colors of the LUT or dynamically edit the LUT. The frame with histogram of the image data is displayed using the color map. All frames using the color map are dynamically updated with the new color map.

Version:

1.0

Author:

Matthew J. McAuliffe, Ph.D., Harman Singh, Lynne M. Pusanik

See Also:

ViewJFrameBase, ViewJComponentHistoLUT, JFrameHistogram, Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class javax.swing.JFrame
  javax.swing.JFrame.AccessibleJFrame
- Nested classes/interfaces inherited from class java.awt.Frame
  java.awt.Frame.AccessibleAWTFrame
- Nested classes/interfaces inherited from class java.awt.Window
  java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
- Nested classes/interfaces inherited from class java.awt.Container
  java.awt.Container.AccessibleAWTContainer
- Nested classes/interfaces inherited from class java.awt.Component
  java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields
Modifier and Type	Field	Description
`private boolean`	`calcThresholdVolume`	Deprecated. DOCUMENT ME!
`private ViewJFrameColocalizationEM`	`colEMFrame`	Deprecated. DOCUMENT ME!
`private ViewJFrameColocalizationRegression`	`colRegFrame`	Deprecated. DOCUMENT ME!
`private boolean`	`entireFlag`	Deprecated. DOCUMENT ME!
`private ViewJPanelLUT`	`lutPanel`	Deprecated. DOCUMENT ME!
`private ViewMenuBuilder`	`menuObj`	Deprecated. DOCUMENT ME!
`private java.awt.Frame`	`parentFrame`	Deprecated. Parent frame
`private ViewJComponentRegistration`	`regComponent`	Deprecated. DOCUMENT ME!
`private static long`	`serialVersionUID`	Deprecated. Use serialVersionUID for interoperability.

Fields inherited from class gov.nih.mipav.view.ViewJFrameBase
absoluteGoToButton, absoluteGoToPanel, absoluteLabel, absoluteLabelVals, absolutePanel, absoluteXLabel, absoluteXTextField, absoluteYLabel, absoluteYTextField, absoluteZLabel, absoluteZTextField, alphaBlend, defaultLUTa, defaultLUTb, displayMode, IMAGE_A, IMAGE_A_B, IMAGE_B, imageA, imageB, isClosing, linkedScrolling, linkFrame, linkTriFrame, LUTa, LUTb, progressBar, scannerLPS_APLabel, scannerLPS_APTextField, scannerLPS_GoToButton, scannerLPS_GoToPanel, scannerLPS_ISLabel, scannerLPS_ISTextField, scannerLPS_RLLabel, scannerLPS_RLTextField, scannerLPSLabel, scannerLPSLabelVals, scannerLPSPanel, scannerRAS_APLabel, scannerRAS_APTextField, scannerRAS_GoToButton, scannerRAS_GoToPanel, scannerRAS_ISLabel, scannerRAS_ISTextField, scannerRAS_RLLabel, scannerRAS_RLTextField, scannerRASLabel, scannerRASLabelVals, scannerRASPanel, scannerTabbedPane, tabbedPane, talGoToButton, talGoToPanel, talXLabel, talXTextField, talYLabel, talYTextField, talZLabel, talZTextField, userInterface, zoomMode

Fields inherited from class javax.swing.JFrame
accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Frame
CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, HAND_CURSOR, ICONIFIED, MAXIMIZED_BOTH, MAXIMIZED_HORIZ, MAXIMIZED_VERT, MOVE_CURSOR, N_RESIZE_CURSOR, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, SW_RESIZE_CURSOR, TEXT_CURSOR, W_RESIZE_CURSOR, WAIT_CURSOR

Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors
Constructor	Description
`ViewJFrameHistoLUT(ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag)`	Deprecated.
`ViewJFrameHistoLUT(ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag, boolean visible)`	Deprecated.
`ViewJFrameHistoLUT(ViewJComponentRegistration _regComponent, ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag)`	Deprecated.
`ViewJFrameHistoLUT(ViewJFrameColocalizationEM colEMFrame, ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag)`	Deprecated.
`ViewJFrameHistoLUT(ViewJFrameColocalizationRegression colRegFrame, ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag)`	Deprecated.
`ViewJFrameHistoLUT(java.awt.Frame _parentFrame, ModelImage _imageA, ModelImage _imageB, ModelLUT _LUTa, ModelLUT _LUTb, boolean _entireFlag)`	Deprecated.

Method Summary

All Methods Static Methods Instance Methods Concrete Methods Deprecated Methods
Modifier and Type	Method	Description
`void`	`actionPerformed(java.awt.event.ActionEvent event)`	Deprecated. Calls various methods depending on the action.
`private void`	`buildMenu()`	Deprecated. This method builds a menu which contains the options for opening/saving a LUT or set of transfer functions, closing the LUT, and utilities such as CT presets.
`static javax.swing.JLabel`	`createSliderLabel(java.lang.String title)`	Deprecated.
`void`	`dispose()`	Deprecated. Disposes of components and frame.
`boolean`	`doCalcThresholdVolume()`	Deprecated. Whether or not to calculate the threshold volume.
`void`	`enableThresholdingItems(boolean flag)`	Deprecated. Enables the thresholding menu item(s).
`ViewJComponentHLUTBase`	`getComponentHistoLUT(int imageAorB)`	Deprecated. DOCUMENT ME!
`ViewControlsImage`	`getControls()`	Deprecated. Gets the control widgets for the frame.
`ViewJComponentHLUTBase`	`getHistoLUTComponentA()`	Deprecated. Get the histogram component for imageA.
`ViewJComponentHLUTBase`	`getHistoLUTComponentB()`	Deprecated. Get the histogram component for imageB.
`ModelImage`	`getImageA()`	Deprecated. Accessor that returns the imageA.
`ModelImage`	`getImageB()`	Deprecated. Accessor that returns the imageB.
`float`	`getLowerThreshold()`	Deprecated. Returns the lower threshold value.
`ModelLUT`	`getLUT()`	Deprecated. This method returns the current LUT.
`ViewJComponentLUT`	`getLUTComponentA()`	Deprecated. Get the imageA LUT.
`ViewJComponentLUT`	`getLUTComponentB()`	Deprecated. Get the imageB LUT.
`JDialogRecordLUT`	`getLUTRecorder()`	Deprecated. Get the JDialogRecordLUT reference from ViewJPanelLUT.
`TransferFunction`	`getTransferLine()`	Deprecated. This method is used to obtain the VOIBase Single Transfer Line from ViewJFrameComponentHistoLut.
`float`	`getUpperThreshold()`	Deprecated. Returns the upper threshold value.
`boolean`	`getWholeImageFlag()`	Deprecated. Returns whether the whole image is being examined or just the VOI region.
`boolean`	`isThresholding()`	Deprecated. Returns true if comphist A or B is in dual threshold inverse mode (for JDialogConvertType input ranges).
`void`	`notifyOfUpdate(ModelLUT LUT, int imageAorB)`	Deprecated. Enable button to indicate image has changed and the histogram should be recalculated.
`void`	`removeControls()`	Deprecated. Removes the menu and controls of the main frame so that a new frame can load the main frame with the proper controls.Abstract and must be extended.
`void`	`removeHistoLUTb()`	Deprecated. Removes the tabbed pane for the histogram of image B.
`void`	`setActiveImage(int active)`	Deprecated. Sets the active image for drawing VOIs.
`void`	`setAlphaBlend(int value)`	Deprecated. Sets the alpha blending of parameter for two image displaying.
`void`	`setControls()`	Deprecated. Sets the menu and controls (i.e. toolbars) of the main frame!
`void`	`setCTMode(int st, int end)`	Deprecated. This method is used to set Computed Tomography (CT) presets for CT images.
`void`	`setDisplayMode(int mode)`	Deprecated. Change the image display mode.
`void`	`setEnabled(boolean flag)`	Deprecated. Controls whether or not the images/VOIs of the frame can be modified.
`void`	`setImageB(ModelImage image)`	Deprecated. Accessor that sets the imageB.
`void`	`setLinearLUT()`	Deprecated. This method sets the histogram to Linear Transfer Function Mode.
`void`	`setLUT(ModelLUT newLUT)`	Deprecated. Change the panel's LUT.
`void`	`setLUTA(ModelLUT LUT)`	Deprecated. Replaces the LUT A component.
`void`	`setLUTB(ModelLUT LUT)`	Deprecated. Replaces the LUT B component.
`void`	`setPaintBitmapSwitch(boolean flag)`	Deprecated. DOCUMENT ME!
`void`	`setRGBTA(ModelRGB RGBT)`	Deprecated. The following 2 functions set the RGB tables for images A and B.
`void`	`setRGBTB(ModelRGB RGBT)`	Deprecated. DOCUMENT ME!
`void`	`setSlice(int slice)`	Deprecated. Does nothing in this class.
`void`	`setTimeSlice(int tSlice)`	Deprecated. Does nothing in this class.
`void`	`setTitle()`	Deprecated. setTitle.
`void`	`update()`	Deprecated. Redisplays histoLUT.
`void`	`updateFrames(boolean flag)`	Deprecated. Update registration frames.
`void`	`updateHistoLUT(ModelImage _imageA, ModelLUT _LUTa, ModelImage _imageB, ModelLUT _LUTb, boolean progressFlag)`	Deprecated. This method is called to update the histogram(s) displayed in each tabbed pane of the frame.
`boolean`	`updateImageExtents()`	Deprecated. This methods calls the componentImage's REPAINT method to redraw the screen.
`boolean`	`updateImages()`	Deprecated. This methods calls the componentImage's REPAINT method to redraw the screen.
`boolean`	`updateImages(boolean flag)`	Deprecated. This methods calls the componentImage's update method to redraw the screen.
`boolean`	`updateImages(ModelLUT LUTa, ModelLUT LUTb, boolean flag, int interpMode)`	Deprecated. This methods calls the componentImage's update method to redraw the screen.
`void`	`updateLUTPositionString(java.lang.String str)`	Deprecated.
`void`	`windowActivated(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.
`void`	`windowClosed(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.
`void`	`windowClosing(java.awt.event.WindowEvent event)`	Deprecated. Calls close.
`void`	`windowDeactivated(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.
`void`	`windowDeiconified(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.
`void`	`windowIconified(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.
`void`	`windowOpened(java.awt.event.WindowEvent event)`	Deprecated. Unchanged.

Methods inherited from class gov.nih.mipav.view.ViewJFrameBase
about, buildLabelPanel, canCloseImageBAfterLoad, close, close, closeImageB, componentHidden, componentMoved, componentResized, componentShown, finalize, getAlphaBlend, getDefaultLUTa, getDefaultLUTb, getDisplayMode, getImageNameA, getImageNameB, getLastState, getLUTa, getLUTb, getRGBTA, getRGBTB, getTriImg, getUserInterface, handleMaskPopupMenu, handlePaintToMaskPopupMenu, handleZoomPopupMenu, initExtents, initImageBuffer, initLUT, initNumSlices, initPixelBuffer, initResFactor, initResolutions, initRGB, initSlicePositions, initUnits, initZoom, loadAllVOIs, loadAllVOIsFrom, loadImage, loadLUT, loadLUTandTransferFunctionFrom, loadLUTandTransferFunctionFrom, makeString, newFrameBeenCreated, openVOI, openVOI, pickImageFile, save, save, save, saveAllVOIs, saveAllVOIsTo, saveLabels, saveLUT, saveLUTandTransferFunction, saveLUTandTransferFunction, saveLUTAs, saveLUTAs, saveVOI, saveVOIAs, saveVOIAs, saveVOIIntensities, saveVOIIntensitiesTo, setAbsPositionLabels, setEnableCloseImageBAfterLoad, setImageA, setLastState, setLinkedFrame, setLinkedTriFrame, setLUTa, setLUTb, setLUTs, setMessageText, setOpacityInfo, setpaintBitmap, setScannerPosition, stateChanged

Methods inherited from class javax.swing.JFrame
addImpl, createRootPane, frameInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setIconImage, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Frame
addNotify, getCursorType, getExtendedState, getFrames, getIconImage, getMaximizedBounds, getMenuBar, getState, getTitle, isResizable, isUndecorated, remove, removeNotify, setBackground, setCursor, setExtendedState, setMaximizedBounds, setMenuBar, setOpacity, setResizable, setShape, setState, setTitle, setUndecorated

Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, hide, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, setVisible, show, toBack, toFront

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer
getFont, postEvent

- Field Detail
  - serialVersionUID
```
private static final long serialVersionUID
```
    Deprecated.
    
    Use serialVersionUID for interoperability.
    
    See Also:
    
    Constant Field Values
  - calcThresholdVolume
```
private boolean calcThresholdVolume
```
    Deprecated.
    
    DOCUMENT ME!
  - colEMFrame
```
private ViewJFrameColocalizationEM colEMFrame
```
    Deprecated.
    
    DOCUMENT ME!
  - colRegFrame
```
private ViewJFrameColocalizationRegression colRegFrame
```
    Deprecated.
    
    DOCUMENT ME!
  - parentFrame
```
private java.awt.Frame parentFrame
```
    Deprecated.
    
    Parent frame
  - entireFlag
```
private boolean entireFlag
```
    Deprecated.
    
    DOCUMENT ME!
  - lutPanel
```
private ViewJPanelLUT lutPanel
```
    Deprecated.
    
    DOCUMENT ME!
  - menuObj
```
private ViewMenuBuilder menuObj
```
    Deprecated.
    
    DOCUMENT ME!
  - regComponent
```
private ViewJComponentRegistration regComponent
```
    Deprecated.
    
    DOCUMENT ME!
- Constructor Detail
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - Flag indicating if histogram should be done on all of image.
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(java.awt.Frame _parentFrame,
                          ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    _parentFrame - parent frame to hold the image.
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - Flag indicating if histogram should be done on all of image.
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag,
                          boolean visible)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - Flag indicating if histogram should be done on all of image.
    
    visible - Frame visible or not.
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(ViewJFrameColocalizationRegression colRegFrame,
                          ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    colRegFrame - DOCUMENT ME!
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - Flag indicating if histogram should be done on all of image.
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(ViewJFrameColocalizationEM colEMFrame,
                          ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    colEMFrame - DOCUMENT ME!
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - Flag indicating if histogram should be done on all of image.
  - ViewJFrameHistoLUT
```
public ViewJFrameHistoLUT(ViewJComponentRegistration _regComponent,
                          ModelImage _imageA,
                          ModelImage _imageB,
                          ModelLUT _LUTa,
                          ModelLUT _LUTb,
                          boolean _entireFlag)
```
    Deprecated.
    
    Makes a frame of the histogram and LUT.
    
    Parameters:
    
    _regComponent - component to which information is passed in manual registration
    
    _imageA - Model of imageA
    
    _imageB - Model of imageB
    
    _LUTa - Model of LUT for image A
    
    _LUTb - Model of LUT for image B
    
    _entireFlag - DOCUMENT ME!
- Method Detail
  - createSliderLabel
```
public static final javax.swing.JLabel createSliderLabel(java.lang.String title)
```
    Deprecated.
    
    Creates a label in the proper font and color.
    
    Parameters:
    
    title - The title of the label.
    
    Returns:
    
    The new label.
    
    See Also:
    
    MipavUtil
  - actionPerformed
```
public void actionPerformed(java.awt.event.ActionEvent event)
```
    Deprecated.
    
    Calls various methods depending on the action.
    
    Specified by:
    
    actionPerformed in interface java.awt.event.ActionListener
    
    Specified by:
    
    actionPerformed in class ViewJFrameBase
    
    Parameters:
    
    event - event that triggered function
  - dispose
```
public void dispose()
```
    Deprecated.
    
    Disposes of components and frame.
    
    Overrides:
    
    dispose in class java.awt.Window
  - doCalcThresholdVolume
```
public boolean doCalcThresholdVolume()
```
    Deprecated.
    
    Whether or not to calculate the threshold volume.
    
    Returns:
    
    boolean do calc?
  - enableThresholdingItems
```
public void enableThresholdingItems(boolean flag)
```
    Deprecated.
    
    Enables the thresholding menu item(s).
    
    Parameters:
    
    flag - whether to enable the items
  - getComponentHistoLUT
```
public ViewJComponentHLUTBase getComponentHistoLUT(int imageAorB)
```
    Deprecated.
    
    DOCUMENT ME!
    
    Parameters:
    
    imageAorB - DOCUMENT ME!
    
    Returns:
    
    DOCUMENT ME!
  - getControls
```
public ViewControlsImage getControls()
```
    Deprecated.
    
    Gets the control widgets for the frame.
    
    Specified by:
    
    getControls in class ViewJFrameBase
    
    Returns:
    
    DOCUMENT ME!
  - getHistoLUTComponentA
```
public ViewJComponentHLUTBase getHistoLUTComponentA()
```
    Deprecated.
    
    Get the histogram component for imageA.
    
    Returns:
    
    the imageA histogram component
  - getHistoLUTComponentB
```
public ViewJComponentHLUTBase getHistoLUTComponentB()
```
    Deprecated.
    
    Get the histogram component for imageB.
    
    Returns:
    
    the imageB histogram component
  - getImageA
```
public ModelImage getImageA()
```
    Deprecated.
    
    Accessor that returns the imageA.
    
    Specified by:
    
    getImageA in class ViewJFrameBase
    
    Returns:
    
    image
  - getImageB
```
public ModelImage getImageB()
```
    Deprecated.
    
    Accessor that returns the imageB.
    
    Specified by:
    
    getImageB in class ViewJFrameBase
    
    Returns:
    
    imageB
  - getLowerThreshold
```
public float getLowerThreshold()
```
    Deprecated.
    
    Returns the lower threshold value.
    
    Returns:
    
    float lower thresh
  - getLUT
```
public ModelLUT getLUT()
```
    Deprecated.
    
    This method returns the current LUT.
    
    Returns:
    
    LUT for Image A if selected, otherwise for Image B
  - getLUTComponentA
```
public final ViewJComponentLUT getLUTComponentA()
```
    Deprecated.
    
    Get the imageA LUT.
    
    Returns:
    
    the imageA LUT component
  - getLUTComponentB
```
public final ViewJComponentLUT getLUTComponentB()
```
    Deprecated.
    
    Get the imageB LUT.
    
    Returns:
    
    the imageB LUT component
  - getLUTRecorder
```
public JDialogRecordLUT getLUTRecorder()
```
    Deprecated.
    
    Get the JDialogRecordLUT reference from ViewJPanelLUT.
    
    Returns:
    
    JDialogRecordLUT
  - getTransferLine
```
public TransferFunction getTransferLine()
```
    Deprecated.
    
    This method is used to obtain the VOIBase Single Transfer Line from ViewJFrameComponentHistoLut.
    
    Returns:
    
    LUTb.getTransferFunction() - VOIBase of Single Transfer Line for Image B
  - getUpperThreshold
```
public float getUpperThreshold()
```
    Deprecated.
    
    Returns the upper threshold value.
    
    Returns:
    
    float upper thresh
  - getWholeImageFlag
```
public boolean getWholeImageFlag()
```
    Deprecated.
    
    Returns whether the whole image is being examined or just the VOI region.
    
    Returns:
    
    whether the whole image is being examined or just the VOI region
  - isThresholding
```
public boolean isThresholding()
```
    Deprecated.
    
    Returns true if comphist A or B is in dual threshold inverse mode (for JDialogConvertType input ranges).
    
    Returns:
    
    boolean is dual threshold inversing
  - notifyOfUpdate
```
public void notifyOfUpdate(ModelLUT LUT,
                           int imageAorB)
```
    Deprecated.
    
    Enable button to indicate image has changed and the histogram should be recalculated.
    
    Parameters:
    
    LUT - new Lookup table
    
    imageAorB - indicates which histogram needs to be recalculated
  - removeControls
```
public void removeControls()
```
    Deprecated.
    
    Removes the menu and controls of the main frame so that a new frame can load the main frame with the proper controls.Abstract and must be extended.
    
    Specified by:
    
    removeControls in class ViewJFrameBase
  - removeHistoLUTb
```
public void removeHistoLUTb()
```
    Deprecated.
    
    Removes the tabbed pane for the histogram of image B.
  - setActiveImage
```
public void setActiveImage(int active)
```
    Deprecated.
    
    Sets the active image for drawing VOIs. VOIs are only drawn in the active image. In addition, algorithms are executed on the active window.
    
    Specified by:
    
    setActiveImage in class ViewJFrameBase
    
    Parameters:
    
    active - IMAGE_A or IMAGE_B
  - setAlphaBlend
```
public void setAlphaBlend(int value)
```
    Deprecated.
    
    Sets the alpha blending of parameter for two image displaying.
    
    Specified by:
    
    setAlphaBlend in class ViewJFrameBase
    
    Parameters:
    
    value - amount [0,100] that is the percentage of Image A to be displayed and (1-percentage) of Image B to be displayed
  - setControls
```
public void setControls()
```
    Deprecated.
    
    Sets the menu and controls (i.e. toolbars) of the main frame! This puts only the menus and controls needed to controls the operations of this frame. Different image frames have different menu and controls.
    
    Specified by:
    
    setControls in class ViewJFrameBase
  - setCTMode
```
public void setCTMode(int st,
                      int end)
```
    Deprecated.
    
    This method is used to set Computed Tomography (CT) presets for CT images.
    
    Parameters:
    
    st - starting preset of the window
    
    end - ending preset of the window
    
    See Also:
    
    JDialogCT
  - setDisplayMode
```
public void setDisplayMode(int mode)
```
    Deprecated.
    
    Change the image display mode.
    
    Parameters:
    
    mode - IMAGE_A or IMAGE_B or IMAGE_A_B
  - setEnabled
```
public void setEnabled(boolean flag)
```
    Deprecated.
    
    Controls whether or not the images/VOIs of the frame can be modified.
    
    Specified by:
    
    setEnabled in class ViewJFrameBase
    
    Parameters:
    
    flag - if true the image/VOIs can be modified; if false image/VOIs can NOT be modified
  - setImageB
```
public void setImageB(ModelImage image)
```
    Deprecated.
    
    Accessor that sets the imageB.
    
    Specified by:
    
    setImageB in class ViewJFrameBase
    
    Parameters:
    
    image - image to set frame to
  - setLinearLUT
```
public void setLinearLUT()
```
    Deprecated.
    
    This method sets the histogram to Linear Transfer Function Mode.
  - setLUT
```
public void setLUT(ModelLUT newLUT)
```
    Deprecated.
    
    Change the panel's LUT.
    
    Parameters:
    
    newLUT - the new LUT
  - setLUTA
```
public void setLUTA(ModelLUT LUT)
```
    Deprecated.
    
    Replaces the LUT A component.
    
    Parameters:
    
    LUT - new LUT
  - setLUTB
```
public void setLUTB(ModelLUT LUT)
```
    Deprecated.
    
    Replaces the LUT B component.
    
    Parameters:
    
    LUT - new LUT
  - setPaintBitmapSwitch
```
public void setPaintBitmapSwitch(boolean flag)
```
    Deprecated.
    
    DOCUMENT ME!
    
    Specified by:
    
    setPaintBitmapSwitch in class ViewJFrameBase
    
    Parameters:
    
    flag - DOCUMENT ME!
  - setRGBTA
```
public void setRGBTA(ModelRGB RGBT)
```
    Deprecated.
    
    The following 2 functions set the RGB tables for images A and B.
    
    Specified by:
    
    setRGBTA in class ViewJFrameBase
    
    Parameters:
    
    RGBT - DOCUMENT ME!
  - setRGBTB
```
public void setRGBTB(ModelRGB RGBT)
```
    Deprecated.
    
    DOCUMENT ME!
    
    Specified by:
    
    setRGBTB in class ViewJFrameBase
    
    Parameters:
    
    RGBT - DOCUMENT ME!
  - setSlice
```
public void setSlice(int slice)
```
    Deprecated.
    
    Does nothing in this class.
    
    Specified by:
    
    setSlice in interface ViewImageUpdateInterface
    
    Parameters:
    
    slice - DOCUMENT ME!
  - setTimeSlice
```
public void setTimeSlice(int tSlice)
```
    Deprecated.
    
    Does nothing in this class.
    
    Specified by:
    
    setTimeSlice in interface ViewImageUpdateInterface
    
    Parameters:
    
    tSlice - DOCUMENT ME!
  - setTitle
```
public void setTitle()
```
    Deprecated.
    
    setTitle.
    
    Specified by:
    
    setTitle in class ViewJFrameBase
  - update
```
public void update()
```
    Deprecated.
    
    Redisplays histoLUT.
  - updateFrames
```
public void updateFrames(boolean flag)
```
    Deprecated.
    
    Update registration frames.
    
    Parameters:
    
    flag - whether to display a reloading of the image in the frames
  - updateHistoLUT
```
public void updateHistoLUT(ModelImage _imageA,
                           ModelLUT _LUTa,
                           ModelImage _imageB,
                           ModelLUT _LUTb,
                           boolean progressFlag)
```
    Deprecated.
    
    This method is called to update the histogram(s) displayed in each tabbed pane of the frame.
    
    Parameters:
    
    _imageA - image A
    
    _LUTa - lookup table for image A
    
    _imageB - image B
    
    _LUTb - lookup table for image B
    
    progressFlag - passed to calculateHistogram algorithm. If false progress bar is not displayed
  - updateImageExtents
```
public boolean updateImageExtents()
```
    Deprecated.
    
    This methods calls the componentImage's REPAINT method to redraw the screen. The extents on this image have changed, so the extents need to be read in again and menus, panes and slide bars adjusted accordingly.
    
    Specified by:
    
    updateImageExtents in interface ViewImageUpdateInterface
    
    Specified by:
    
    updateImageExtents in class ViewJFrameBase
    
    Returns:
    
    DOCUMENT ME!
    
    See Also:
    
    ViewImageUpdateInterface
  - updateImages
```
public boolean updateImages()
```
    Deprecated.
    
    This methods calls the componentImage's REPAINT method to redraw the screen. Without LUT changes or image changes
    
    Specified by:
    
    updateImages in interface ViewImageUpdateInterface
    
    Returns:
    
    DOCUMENT ME!
  - updateImages
```
public boolean updateImages(boolean flag)
```
    Deprecated.
    
    This methods calls the componentImage's update method to redraw the screen. Without LUT changes. Does nothing in this class.
    
    Specified by:
    
    updateImages in interface ViewImageUpdateInterface
    
    Parameters:
    
    flag - forces show to re import image and calc. java image
    
    Returns:
    
    boolean confirming successful update
  - updateImages
```
public boolean updateImages(ModelLUT LUTa,
                            ModelLUT LUTb,
                            boolean flag,
                            int interpMode)
```
    Deprecated.
    
    This methods calls the componentImage's update method to redraw the screen. Does nothing in this class.
    
    Specified by:
    
    updateImages in interface ViewImageUpdateInterface
    
    Parameters:
    
    LUTa - LUT used to update imageA
    
    LUTb - LUT used to update imageB
    
    flag - forces show to re import image and calc. java image
    
    interpMode - image interpolation method (Nearest or Smooth)
    
    Returns:
    
    boolean confirming a successful update
  - updateLUTPositionString
```
public void updateLUTPositionString(java.lang.String str)
```
    Deprecated.
  - windowActivated
```
public void windowActivated(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowActivated in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowActivated in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - windowClosed
```
public void windowClosed(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowClosed in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowClosed in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - windowClosing
```
public void windowClosing(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Calls close.
    
    Specified by:
    
    windowClosing in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowClosing in class ViewJFrameBase
    
    Parameters:
    
    event - event that triggered function
  - windowDeactivated
```
public void windowDeactivated(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowDeactivated in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowDeactivated in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - windowDeiconified
```
public void windowDeiconified(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowDeiconified in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowDeiconified in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - windowIconified
```
public void windowIconified(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowIconified in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowIconified in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - windowOpened
```
public void windowOpened(java.awt.event.WindowEvent event)
```
    Deprecated.
    
    Unchanged.
    
    Specified by:
    
    windowOpened in interface java.awt.event.WindowListener
    
    Overrides:
    
    windowOpened in class ViewJFrameBase
    
    Parameters:
    
    event - DOCUMENT ME!
  - buildMenu
```
private void buildMenu()
```
    Deprecated.
    
    This method builds a menu which contains the options for opening/saving a LUT or set of transfer functions, closing the LUT, and utilities such as CT presets.

Class ViewJFrameHistoLUT

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JFrame

Nested classes/interfaces inherited from class java.awt.Frame

Nested classes/interfaces inherited from class java.awt.Window

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Field Summary

Fields inherited from class gov.nih.mipav.view.ViewJFrameBase

Fields inherited from class javax.swing.JFrame

Fields inherited from class java.awt.Frame

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Fields inherited from interface javax.swing.WindowConstants

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.view.ViewJFrameBase

Methods inherited from class javax.swing.JFrame

Methods inherited from class java.awt.Frame

Methods inherited from class java.awt.Window

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Methods inherited from interface java.awt.MenuContainer

Field Detail

serialVersionUID

calcThresholdVolume

colEMFrame

colRegFrame

parentFrame

entireFlag

lutPanel

menuObj

regComponent

Constructor Detail

ViewJFrameHistoLUT

ViewJFrameHistoLUT

ViewJFrameHistoLUT

ViewJFrameHistoLUT

ViewJFrameHistoLUT

ViewJFrameHistoLUT

Method Detail

createSliderLabel

actionPerformed

dispose

doCalcThresholdVolume

enableThresholdingItems

getComponentHistoLUT

getControls

getHistoLUTComponentA

getHistoLUTComponentB

getImageA

getImageB

getLowerThreshold

getLUT

getLUTComponentA

getLUTComponentB

getLUTRecorder

getTransferLine

getUpperThreshold

getWholeImageFlag

isThresholding

notifyOfUpdate

removeControls

removeHistoLUTb

setActiveImage

setAlphaBlend

setControls

setCTMode

setDisplayMode

setEnabled

setImageB

setLinearLUT

setLUT

setLUTA

setLUTB

setPaintBitmapSwitch

setRGBTA

setRGBTB

setSlice