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From MIPAV
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- Uses the median of the pixel's 8 nearest neighbors in 2D images or ... center pixel itself, to estimate the pixel's correct value. This allows ...5 KB (665 words) - 19:01, 8 May 2013
- 4 If you want to remove a certain image(s), select it, and then press ... list press Browse, and then select the image(s) from your disk. ...7 KB (1,014 words) - 19:34, 27 March 2013
- This option allows to save a paint mask(s) to a file. It is useful ... Loads the saved mask(s) from a file. |- | Import from VOIs ...15 KB (2,334 words) - 19:42, 9 August 2012
- are addressed in detail in volume 2 of the User's Guide. == Understanding contours and masks == Before you indicate a volume of interest, it is ...3 KB (468 words) - 19:44, 9 August 2012
- field estimates at the n-th location, s -denotes standard deviation ... VOI region(s) | rowspan="1" colspan="2" | Applies the algorithm to ...18 KB (2,624 words) - 14:09, 13 August 2012
- in the fovea over time, comparing the pigment's absorption over time and how ... to analyze the MP map using the user defined VOI(s). == Registration == ...15 KB (2,322 words) - 13:06, 28 August 2012
- VOI region(s) | rowspan="1" colspan="2" | Applies the algorithm inside VOIs. Outside VOIs, the pixel values are unchanged. |- | OK ...4 KB (647 words) - 14:49, 21 August 2012
- user is asked to provide the output volume's desired resolutions and dimensions. ... the image will be rotated about the scanner's center, this choice is available ...15 KB (2,339 words) - 15:51, 25 April 2013
- in a new image frame. You can also press S on your keyboard to run the command. box to the initial values. You can also press S on your keyboard to run the command. ...18 KB (3,164 words) - 15:19, 19 September 2012
- and then upload that profile to use with other image(s). The Save Profile option allows to save current settings in a text file. The Save Default ...891 B (157 words) - 18:10, 7 November 2012
- * One can write one’s own plug-ins. * MIPAV algorithms are more mathematically ... 7. Manually remove bad pixel(s) from each calibrated science image ...22 KB (3,429 words) - 15:37, 22 August 2013
- corresponding to the smallest value(s) of the cost function are then ... corresponding to the smallest value(s) of the cost function are determined ...34 KB (4,861 words) - 16:34, 2 November 2012
- open the VOIs file for the extra opened image. Let's name the first opened image the source image and the second opened image the extra image. ...17 KB (2,511 words) - 19:27, 2 April 2013
- the underlying structure of the application's software design. ... === Sampling of MIPAV's features === MIPAV provides ready-made, general ...13 KB (1,812 words) - 12:52, 11 March 2013
- for requires a command and uses that command's return value as the boolean ... When there is more than one MIPAV application window running, it's ...12 KB (1,703 words) - 16:19, 12 March 2013
- ** Added DTI pre-processing step to resample T2 image to match B0 ... ** Fixed bug in handling of Full Powell's method checkbox in OAR 3 ...41 KB (6,332 words) - 20:42, 5 April 2013
- the problem. To add this to MIPAV's startup, go to the installation directory of MIPAV on the remote computer and open the file mipav.lax in ...2 KB (238 words) - 16:37, 22 May 2013
- c_vmxxxx.fre where xxxx is the location in mm's of the slice. There are 522 ... The matrix filedescribes the image's orientation, translations, offset ...54 KB (7,655 words) - 16:40, 13 January 2014
- vector file usually indicates the line segment's starting point, direction, and length. In MIPAV you can create geometrically shaped contours to indicate ...20 KB (2,972 words) - 19:13, 24 May 2013
- # brain image(s) in one of supported formats, # corresponding CSV files ... # the brain image(s) in one of supported formats, # the CSV file(s ...22 KB (3,478 words) - 13:05, 5 September 2013
- of plug-in hides MIPAV and displays its own image(s) with the action and algorithm handling specific to its frame. == To create a self-contained ...41 KB (4,593 words) - 12:10, 24 June 2013
- Installing simple plug-in programs merely copies files into the user's home directory. Windows' c:\Documents and Settings\<user ID>\mipav ...5 KB (558 words) - 12:08, 24 June 2013
- of the underlying structure of MIPAV's software design and data structure. Because plug-ins are written in Java, you should also have a basic ...1 KB (236 words) - 12:08, 24 June 2013
- MIPAV provides the following classes for developing plug-in programs: PlugInAlgorithm.class PlugInFile.class PlugInView.class Plug-in programs ...58 KB (6,774 words) - 12:09, 24 June 2013
- It can be a mixture of calls to MIPAV's API, C programs, Perl, ITK, etc. program. The following sample plug-in program(s) are included in MIPAV documentation ...75 KB (8,391 words) - 12:10, 24 June 2013
- dialog box, select either Whole image or VOI region(s). ... Displays the image's histogram count in log scale along the Y axis. ...17 KB (2,557 words) - 15:58, 12 July 2013
- element occupies the space provided by field(s) on a paper/electronic case ... # If there are no errors found in your CSV file(s), for each file ...13 KB (1,999 words) - 20:40, 21 August 2013
- Java Web Start application locally on a user's computer (Java runtime environment ... # a brain image(s) in one of supported formats, # a corresponding CSV ...8 KB (1,209 words) - 17:27, 26 July 2013
- table you can watch the progress of your submission(s). The table will update as file(s) are being uploaded to the system. For successful upload(s ...6 KB (895 words) - 13:04, 29 July 2013
- as a Java Web Start application on a user's computer (requires the Java ... from which you wish to download a dataset(s). If the study you wish to ...6 KB (936 words) - 18:48, 29 July 2013
- \overrightarrow {S_N} = ( \overrightarrow{S} \overrightarrow {V_N} ... \overrightarrow {S_T} = \overrightarrow {S} - \overrightarrow {S_N} ...18 KB (2,915 words) - 15:47, 15 January 2014
- To adjust the LUT, you open the Look-up Table window to modify the ... *VOI region(s) -To generate a histogram for the VOI region of the image ...27 KB (3,876 words) - 13:30, 26 March 2012
