Package gov.nih.mipav.view.renderer.J3D.surfaceview.brainflattenerview

Class JPanelBrainSurfaceFlattener

  • All Implemented Interfaces:
    ViewImageUpdateInterface, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.KeyListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible
    public class JPanelBrainSurfaceFlattener
extends JPanelRendererJ3D
implements ViewImageUpdateInterface
    DOCUMENT ME!
    See Also:
    Serialized Form

    • Nested Class Summary

      • Nested classes/interfaces inherited from class javax.swing.JPanel

        javax.swing.JPanel.AccessibleJPanel

      • Nested classes/interfaces inherited from class javax.swing.JComponent

        javax.swing.JComponent.AccessibleJComponent

      • Nested classes/interfaces inherited from class java.awt.Container

        java.awt.Container.AccessibleAWTContainer

      • Nested classes/interfaces inherited from class java.awt.Component

        java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void actionPerformed​(java.awt.event.ActionEvent event)
      Closes dialog box when the OK button is pressed, sets up the variables needed for running the algorithm, and calls the algorithm.
      private void createLUTFromSurface()
      Creates a LUT for the surface, where the curvature values are used in the look-up table instead of the ModelImage values:
      private void displayCorticalAnalysis()
      Resets the Mesh Display, when the file is reloaded:
      void disposeLocal()
      DOCUMENT ME!
      protected void finalize()
      Delete all local member variables:
      ModelImage getImageA()
      DOCUMENT ME!
      ModelImage getImageB()
      DOCUMENT ME!
      javax.swing.JPanel getMainPanel()
      Return the main control panel.
      private void init()
      Initialize the user-interface, buttons and ActionCommands.
      private void loadingImage()
      Load a new ModelImage for the brainsurface flattener scene:
      private void loadingSurface()
      Load a new surface file for the brainsurface flattener scene:
      void setSlice​(int slice)
      setSlice.
      void setTimeSlice​(int tSlice)
      setTimeSlice.
      boolean updateImageExtents()
      updateImageExtents.
      boolean updateImages()
      updateImages.
      boolean updateImages​(boolean flag)
      updateImages.
      boolean updateImages​(ModelLUT LUTa, ModelLUT LUTb, boolean flag, int interpMode)
      updateImages.

      • Methods inherited from class javax.swing.JPanel

        getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

      • Methods inherited from class javax.swing.JComponent

        addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, unregisterKeyboardAction, update

      • Methods inherited from class java.awt.Container

        add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusDownCycle, validate, validateTree

      • Methods inherited from class java.awt.Component

        action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setMixingCutoutShape, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

      • Methods inherited from class java.lang.Object

        clone, equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

      • Methods inherited from interface java.awt.event.FocusListener

        focusGained, focusLost

      • Methods inherited from interface java.awt.event.ItemListener

        itemStateChanged

      • Methods inherited from interface java.awt.event.KeyListener

        keyPressed, keyReleased, keyTyped

    • Field Detail

      • serialVersionUID

        private static final long serialVersionUID
        Use serialVersionUID for interoperability.
        See Also:
        Constant Field Values

      • m_bFileLoaded

        private boolean m_bFileLoaded
        DOCUMENT ME!

      • m_bFirstSurface

        private boolean m_bFirstSurface
        DOCUMENT ME!

      • m_iGridY

        private int m_iGridY
        DOCUMENT ME!

      • m_kButtonLoadImage

        private javax.swing.JButton m_kButtonLoadImage
        DOCUMENT ME!

      • m_kButtonLoadSurface

        private javax.swing.JButton m_kButtonLoadSurface
        DOCUMENT ME!

      • m_kCenter

        private javax.vecmath.Point3f m_kCenter
        DOCUMENT ME!

      • m_kDisablePick

        private javax.swing.JRadioButton m_kDisablePick
        DOCUMENT ME!

      • m_kDisplayButtonGroup

        private javax.swing.ButtonGroup m_kDisplayButtonGroup
        DOCUMENT ME!

      • m_kDisplayPlane

        private javax.swing.JRadioButton m_kDisplayPlane
        DOCUMENT ME!

      • m_kDisplaySphere

        private javax.swing.JRadioButton m_kDisplaySphere
        DOCUMENT ME!

      • m_kFile

        private java.io.File m_kFile
        DOCUMENT ME!

      • m_kImage

        private ModelImage m_kImage
        DOCUMENT ME!

      • m_kImageDir

        private java.lang.String m_kImageDir
        DOCUMENT ME!

      • m_kImageFile

        private java.lang.String m_kImageFile
        DOCUMENT ME!

      • m_kLabelFileName

        private javax.swing.JLabel m_kLabelFileName
        DOCUMENT ME!

      • m_kLabelFileNameImage

        private javax.swing.JLabel m_kLabelFileNameImage
        DOCUMENT ME!

      • m_kLatLonLines

        private javax.swing.JCheckBox m_kLatLonLines
        DOCUMENT ME!

      • m_kLUTa

        private ModelLUT m_kLUTa
        DOCUMENT ME!

      • m_kLUTImageA

        private ModelImage m_kLUTImageA
        DOCUMENT ME!

      • m_kNumLatText

        private javax.swing.JTextField m_kNumLatText
        DOCUMENT ME!

      • m_kNumLonText

        private javax.swing.JTextField m_kNumLonText
        DOCUMENT ME!

      • m_kPanelBrainsurfaceFlattenerLUT

        private JFrameHistogram m_kPanelBrainsurfaceFlattenerLUT
        DOCUMENT ME!

      • m_kPickButtonGroup

        private javax.swing.ButtonGroup m_kPickButtonGroup
        DOCUMENT ME!

      • m_kPickCorrespondence

        private javax.swing.JRadioButton m_kPickCorrespondence
        DOCUMENT ME!

      • m_kPickPuncture

        private javax.swing.JRadioButton m_kPickPuncture
        DOCUMENT ME!

      • m_kSurfaceDir

        private java.lang.String m_kSurfaceDir
        DOCUMENT ME!

    • Constructor Detail

      • JPanelBrainSurfaceFlattener

        public JPanelBrainSurfaceFlattener​(MjCorticalAnalysis kView,
                                   ModelImage kImage,
                                   ViewJFrameVolumeView kParentFrame)
        Create the control-panel for the brainsurfaceFlattener interface:
        Parameters:
        kView - the engine behind the brainsurfaceFlattener and one of the parent frames affected by the interface
        kImage - the ModelImage data
        kParentFrame - the parent frame for the panel, contains the surfaceRenderer, where the brain model is displayed

    • Method Detail

      • actionPerformed

        public void actionPerformed​(java.awt.event.ActionEvent event)
        Closes dialog box when the OK button is pressed, sets up the variables needed for running the algorithm, and calls the algorithm.
        Specified by:
        actionPerformed in interface java.awt.event.ActionListener
        Specified by:
        actionPerformed in class JPanelRendererBase
        Parameters:
        event - Event that triggers function

      • getImageA

        public ModelImage getImageA()
        DOCUMENT ME!
        Returns:
        DOCUMENT ME!

      • getImageB

        public ModelImage getImageB()
        DOCUMENT ME!
        Returns:
        DOCUMENT ME!

      • getMainPanel

        public javax.swing.JPanel getMainPanel()
        Return the main control panel.
        Specified by:
        getMainPanel in class JPanelRendererBase
        Returns:
        JPanel the main control panel

      • updateImages

        public boolean updateImages​(boolean flag)
        updateImages.
        Specified by:
        updateImages in interface ViewImageUpdateInterface
        Parameters:
        flag - boolean
        Returns:
        boolean

      • updateImages

        public boolean updateImages​(ModelLUT LUTa,
                            ModelLUT LUTb,
                            boolean flag,
                            int interpMode)
        updateImages.
        Specified by:
        updateImages in interface ViewImageUpdateInterface
        Parameters:
        LUTa - ModelLUT
        LUTb - ModelLUT
        flag - boolean
        interpMode - int
        Returns:
        boolean

      • finalize

        protected void finalize()
                 throws java.lang.Throwable
        Delete all local member variables:
        Overrides:
        finalize in class JPanelRendererBase
        Throws:
        java.lang.Throwable - DOCUMENT ME!

      • createLUTFromSurface

        private void createLUTFromSurface()
        Creates a LUT for the surface, where the curvature values are used in the look-up table instead of the ModelImage values:

      • displayCorticalAnalysis

        private void displayCorticalAnalysis()
        Resets the Mesh Display, when the file is reloaded:

      • init

        private void init()
        Initialize the user-interface, buttons and ActionCommands.

      • loadingImage

        private void loadingImage()
        Load a new ModelImage for the brainsurface flattener scene:

      • loadingSurface

        private void loadingSurface()
        Load a new surface file for the brainsurface flattener scene: