Package gov.nih.mipav.view.renderer.J3D.model.file

Class FileInfoSurfaceXML_J3D

java.lang.Object

gov.nih.mipav.model.structures.ModelSerialCloneable

gov.nih.mipav.model.file.FileInfoBase

gov.nih.mipav.model.file.FileInfoXML

gov.nih.mipav.model.file.FileInfoSurfaceXML

gov.nih.mipav.view.renderer.J3D.model.file.FileInfoSurfaceXML_J3D

All Implemented Interfaces:

Serializable, Cloneable

public class FileInfoSurfaceXML_J3D
extends FileInfoSurfaceXML

This structure contains the information that describes how an XML surface (see surface.xsd and FileSurfaceXML.java) is stored on disk.

See Also:

• FileIO
• FileInfoXML
• FileSurfaceXML
• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase

FileInfoBase.AxisOrientation, FileInfoBase.ImageOrientation, FileInfoBase.Modality, FileInfoBase.Unit, FileInfoBase.UnitType

Field Summary

Fields

Modifier and Type	Field	Description
private javax.media.j3d.Material	m_kMaterial	Material properties of the surface:.
private ModelTriangleMesh[]	m_kMesh	Surface triangle mesh:.

Fields inherited from class gov.nih.mipav.model.file.FileInfoSurfaceXML

m_iUnique_ID, m_kLevelDetail, m_kOpacity, m_kType, meshIndex

Fields inherited from class gov.nih.mipav.model.file.FileInfoXML

imageDataFileName, imageDescription

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase

ANGSTROMS, ANGSTROMS_STRING, AXIAL, axisOrientation, axisOrientationStr, BIOMAGNETIC_IMAGING, cameraMake, cameraModel, CENTIMETERS, CENTIMETERS_STRING, COLOR_FLOW_DOPPLER, COMPRESSION_BZIP2, COMPRESSION_GZIP, COMPRESSION_NONE, COMPRESSION_ZIP, COMPUTED_RADIOGRAPHY, COMPUTED_TOMOGRAPHY, conversionSpaceTimeUnits, CORONAL, DEGREES, DEGREES_STRING, DIAPHANOGRAPHY, DIGITAL_RADIOGRAPHY, dtiParams, DUPLEX_DOPPLER, ENDOSCOPY, exposureTime, EXTERNAL_CAMERA_PHOTOGRAPHY, FA, fileName, fileSuffix, FNumber, focalLength, focalLength35, GENERAL_MICROSCOPY, HARDCOPY, HOURS, HOURS_STRING, HZ, HZ_STRING, ICG, imageOrientation, INCHES, INCHES_STRING, INTRAORAL_RADIOGRAPHY, ISOSpeedRating, KILOMETERS, KILOMETERS_STRING, LASER_SURFACE_SCAN, MAGNETIC_RESONANCE, MAGNETIC_RESONANCE_ANGIOGRAPHY, MAGNETIC_RESONANCE_SPECTROSCOPY, MAMMOGRAPHY, METERS, METERS_STRING, MICROMETERS, MICROMETERS_STRING, MICROSEC, MICROSEC_STRING, MILES, MILES_STRING, MILLIMETERS, MILLIMETERS_STRING, MILLISEC, MILLISEC_STRING, MILS, MILS_STRING, MINUTES, MINUTES_STRING, modality, NANOMETERS, NANOMETERS_STRING, NANOSEC, NANOSEC_STRING, NUCLEAR_MEDICINE, ORI_A2P_TYPE, ORI_I2S_TYPE, ORI_L2R_TYPE, ORI_P2A_TYPE, ORI_R2L_TYPE, ORI_S2I_TYPE, ORI_UNKNOWN_TYPE, origin, OTHER, PANORAMIC_XRAY, POSITRON_EMISSION_TOMOGRAPHY, PPM, PPM_STRING, RADIO_FLUOROSCOPY, RADIOGRAPHIC_IMAGING, RADIOTHERAPY_DOSE, RADIOTHERAPY_IMAGE, RADIOTHERAPY_PLAN, RADIOTHERAPY_RECORD, RADIOTHERAPY_STRUCTURE_SET, RADS, RADS_STRING, RED_FREE, SAGITTAL, SECONDS, SECONDS_STRING, SINGLE_PHOTON_EMISSION_COMPUTED_TOMOGRAPHY, SLIDE_MICROSCOPY, sUnits, tagDescription, tagName, THERMOGRAPHY, TRANSFORM_ANOTHER_DATASET, TRANSFORM_MNI_152, TRANSFORM_SCANNER_ANATOMICAL, TRANSFORM_TALAIRACH_TOURNOUX, TRANSFORM_UNKNOWN, tUnits, ULTRASOUND, unitsOfMeasure, UNKNOWN_MEASURE, UNKNOWN_MODALITY, UNKNOWN_ORIENT, UNKNOWN_STRING, XRAY_ANGIOGRAPHY

Constructor Summary

Constructors

Constructor	Description
FileInfoSurfaceXML_J3D(String name, String directory, int format)	Main constructor for FileInfoSurfaceXML.

Method Summary

Modifier and Type	Method	Description
void	finalize()	Prepares the class for cleanup.
javax.media.j3d.Material	getMaterial()	Returns the material properties for the surface:
ModelTriangleMesh[]	getMesh()	Returns the ModelTriangleMesh representing the surface:
void	setAmbient(javax.vecmath.Color3f kColor)	Sets the ambient color of the surface:
void	setDiffuse(javax.vecmath.Color3f kColor)	Sets the diffuse color of the surface:
void	setEmissive(javax.vecmath.Color3f kColor)	Sets the emissive color of the surface:
void	setMaterial(javax.media.j3d.Material kMaterial)	Sets the material properties for the surface:
void	setMesh(ModelTriangleMesh[] kMesh)	Sets the ModelTriangleMesh representing the surface:
void	setMesh(javax.vecmath.Point3f[] kVertices, javax.vecmath.Vector3f[] kNormals, javax.vecmath.Color4f[] kColors, int[] aiConnectivity)	Creates the ModelTriangleMesh for the surface:
void	setShininess(float fShininess)	Sets the surface shininess:
void	setSpecular(javax.vecmath.Color3f kColor)	Sets the specular color of the surface:
void	updateFileInfos(FileInfoXML fInfo)	Used to propogate all FileInfoSurfaceXML private variables to other FileInfosSurfaceXML.

Methods inherited from class gov.nih.mipav.model.file.FileInfoSurfaceXML

displayAboutInfo, getID, getLevelDetail, getOpacity, getType, setID, setLevelDetail, setOpacity, setType

Methods inherited from class gov.nih.mipav.model.file.FileInfoXML

appendImageDescription, getImageDataFileName, getImageDescription, setImageDataFileName, setImageDescription

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase

copyCoreInfo, copyCoreInfo, displayAboutInfo, displayPrimaryInfo, getAboutInfo, getAllSameDimUnits, getAreaUnitsOfMeasureStr, getAxisDirection, getAxisOrientation, getAxisOrientation, getAxisOrientationFromStr, getAxisOrientationStr, getCameraMake, getCameraModel, getCompressionType, getDataType, getDataTypeFromStr, getDTIParameters, getEndianess, getEndianessFromStr, getExposureTime, getExtents, getFileDirectory, getFileFormat, getFileName, getFileSuffix, getFNumber, getFocalLength, getFocalLength35, getImageOrientation, getImageOrientationFromStr, getImageOrientationStr, getIs2_5D, getISOSpeedRating, getLPSOrigin, getLUT, getMax, getMaxB, getMaxG, getMaxR, getMin, getMinB, getMinG, getMinR, getModality, getModalityFromStr, getModalityStr, getModalityStr, getMultiFile, getNumOfBytesPerPixel, getOffset, getOrigin, getOrigin, getOriginalEndianess, getOriginAtSlice, getPhotometric, getPixelPadValue, getPrimaryInfo, getRescaleIntercept, getRescaleSlope, getResolution, getResolutions, getSize, getSliceThickness, getUnitsOfMeasure, getUnitsOfMeasure, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureFromStr, getUnitsOfMeasureStr, getUnitsOfMeasureStr, getVolumeUnitsOfMeasureStr, isDicomOrdered, oppositeOrient, sameAxis, setAxisOrientation, setAxisOrientation, setCameraMake, setCameraModel, setCompressionType, setDataType, setDTIParameters, setEndianess, setExposureTime, setExtents, setExtents, setFileDirectory, setFileFormat, setFileName, setFileSuffix, setFNumber, setFocalLength, setFocalLength35, setImageOrientation, setISOSpeedRating, setLUT, setMax, setMaxB, setMaxG, setMaxR, setMin, setMinB, setMinG, setMinR, setModality, setMultiFile, setOffset, setOrigin, setOrigin, setOriginalEndianess, setPhotometric, setPixelPadValue, setRescaleIntercept, setRescaleSlope, setResolutions, setResolutions, setSliceThickness, setTagDescription, setTagName, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, toString

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable

clone, nativeClone

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

m_kMaterial

private javax.media.j3d.Material m_kMaterial

Material properties of the surface:.

m_kMesh

private ModelTriangleMesh[] m_kMesh

Surface triangle mesh:.

Constructor Details

FileInfoSurfaceXML_J3D

public FileInfoSurfaceXML_J3D(String name,
 String directory,
 int format)

Main constructor for FileInfoSurfaceXML.

Parameters:

name - String file name

directory - String file directory

format - int file format (data type)

Method Details

finalize

public void finalize()

Description copied from class: FileInfoSurfaceXML

Prepares the class for cleanup.

Overrides:

finalize in class FileInfoSurfaceXML

getMaterial

public javax.media.j3d.Material getMaterial()

Returns the material properties for the surface:

Returns:

DOCUMENT ME!

getMesh

public ModelTriangleMesh[] getMesh()

Returns the ModelTriangleMesh representing the surface:

Returns:

DOCUMENT ME!

setAmbient

public void setAmbient(javax.vecmath.Color3f kColor)

Sets the ambient color of the surface:

Parameters:

kColor - DOCUMENT ME!

setDiffuse

public void setDiffuse(javax.vecmath.Color3f kColor)

Sets the diffuse color of the surface:

Parameters:

kColor - DOCUMENT ME!

setEmissive

public void setEmissive(javax.vecmath.Color3f kColor)

Sets the emissive color of the surface:

Parameters:

kColor - DOCUMENT ME!

setMaterial

public void setMaterial(javax.media.j3d.Material kMaterial)

Sets the material properties for the surface:

Parameters:

kMaterial - DOCUMENT ME!

setMesh

public void setMesh(ModelTriangleMesh[] kMesh)

Sets the ModelTriangleMesh representing the surface:

Parameters:

kMesh - DOCUMENT ME!

setMesh

public void setMesh(javax.vecmath.Point3f[] kVertices,
 javax.vecmath.Vector3f[] kNormals,
 javax.vecmath.Color4f[] kColors,
 int[] aiConnectivity)

Creates the ModelTriangleMesh for the surface:

Parameters:

kVertices - Mesh coordinates

kNormals - Mesh normals (may be null)

kColors - Mesh colors (may be null)

aiConnectivity - Mesh index connectivity array

setShininess

public void setShininess(float fShininess)

Sets the surface shininess:

Parameters:

fShininess - DOCUMENT ME!

setSpecular

public void setSpecular(javax.vecmath.Color3f kColor)

Sets the specular color of the surface:

Parameters:

kColor - DOCUMENT ME!

updateFileInfos

public void updateFileInfos(FileInfoXML fInfo)

Used to propogate all FileInfoSurfaceXML private variables to other FileInfosSurfaceXML.

Overrides:

updateFileInfos in class FileInfoSurfaceXML

Parameters:

fInfo - FileInfoSurfaceXML file info to be copied into