Package gov.nih.mipav.model.structures

Class VOILine

java.lang.Object

java.util.AbstractCollection<E>

java.util.AbstractList<E>

java.util.Vector<WildMagic.LibFoundation.Mathematics.Vector3f>

gov.nih.mipav.model.structures.VOIBase

gov.nih.mipav.model.structures.VOILine

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Iterable<WildMagic.LibFoundation.Mathematics.Vector3f>, java.util.Collection<WildMagic.LibFoundation.Mathematics.Vector3f>, java.util.List<WildMagic.LibFoundation.Mathematics.Vector3f>, java.util.RandomAccess

public class VOILine
extends VOIBase

Class for line, a simple extension of VOIBase. A line is formed of two points.

Version:

1.0 March 15, 2000

Author:

Matthew McAuliffe, Ph.D.

See Also:

VOI, Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
private static long	serialVersionUID	Use serialVersionUID for interoperability.

Fields inherited from class gov.nih.mipav.model.structures.VOIBase

active, autoLabel, averagePt, cenMassPt, cenMassPtB, cenMassPtG, cenMassPtR, CIRCLE, closed, display, DOWN, fixed, gcPt, label, lastPoint, LEFT, LEFT_MIDDLE, LOWER_LEFT, LOWER_MIDDLE, LOWER_RIGHT, m_akImageMinMax, m_bQuickLUT, m_bReloadPoints, m_bSplit, m_bUpdateAverage, m_bUpdateBounds, m_bUpdateGeometricCenter, m_bUpdateMask, m_bUpdatePlane, m_iAnchorIndex, m_iPlane, m_iVOIType, m_kColor, m_kPositionSum, m_kVolumeVOI, nearBoundPoint, nearPoint, NOT_A_PLANE, NOT_A_POINT, numPixels, process, RIGHT, RIGHT_MIDDLE, SQUARE, UNKNOWN_SUBTYPE, UP, UPPER_LEFT, UPPER_MIDDLE, UPPER_RIGHT, voiGroup, volumeDisplayRange, XPLANE, YPLANE, ZPLANE

Fields inherited from class java.util.Vector

capacityIncrement, elementCount, elementData

Fields inherited from class java.util.AbstractList

modCount

Constructor Summary

Constructors

Constructor	Description
VOILine()	Default Constructor.
VOILine(VOILine kVOI)	Copy Constructor.
VOILine(java.util.Vector<WildMagic.LibFoundation.Mathematics.Vector3f> kPositions)	Constructor, sets the position of the line.

Method Summary

Modifier and Type	Method	Description
VOILine	clone()
WildMagic.LibFoundation.Mathematics.Vector3f	getGeometricCenter()	Gets the geometric center of the contour.
int	getPositionAndIntensity(WildMagic.LibFoundation.Mathematics.Vector3f[] position, float[] intensity, float[] imageBuffer, int xD)	Gets the position/intensity along a line VOI.
void	translate(float xT, float yT)	Translate both points of the VOI.

Methods inherited from class gov.nih.mipav.model.structures.VOIBase

addElement, addElement, area, areaTwice, calcIntensity, calcIntensity, calcIntensityThreshold, calcRGBIntensity, calcRGBIntensity, calcRGBIntensityThreshold, contain, contains, contains, contains, createVolumeVOI, cycleActivePt, delete, deleteVolumeVOI, display, dispose, distanceToVOI, equals, exportArrays, exportArrays, fillVolume, findPositionAndCurvature, findPositionAndIntensity, findPositionAndIntensity, findVOIIndentations2D, getActivePt, getAllContourPoints, getAnchor, getAverage, getBounds, getBounds, getCenterOfMass, getCenterOfMass, getCenterOfMassB, getCenterOfMassG, getCenterOfMassR, getContourID, getDoGeometricCenterLabel, getGeometricCenterA, getGroup, getImageBoundingBox, getLabel, getLastNumPixels, getLengthPtToPt, getLengthPtToPt, getLengthString, getMaskPositions, getName, getNearBoundPoint, getNearPoint, getNumVoxels, getPlane, getProcess, getSelectedPoint, getSubtype, getTotalLengthString, getType, getVolumeDisplayRange, getVolumeVOI, importArrays, importArrays, importPoints, isActive, isClosed, isFixed, isM_bUpdateBounds, isM_bUpdateGeometricCenter, isQuickLUT, isSplit, nearLine, nearLine, planeFit, reloadPoints, setActive, setAnchor, setClosed, setDoGeometricCenterLabel, setFixed, setGroup, setLabel, setMask, setMaskSlice, setNearBoundPoint, setNearPoint, setPlane, setProcess, setQuickLUT, setSelectedPoint, setSplit, setSubtype, setVolumeDisplayRange, slice, slice, transform, trimPoints, update, update, update

Methods inherited from class java.util.Vector

add, add, addAll, addAll, addElement, capacity, clear, contains, containsAll, copyInto, elementAt, elements, ensureCapacity, firstElement, forEach, get, hashCode, indexOf, indexOf, insertElementAt, isEmpty, iterator, lastElement, lastIndexOf, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, removeAllElements, removeElement, removeElementAt, removeIf, removeRange, replaceAll, retainAll, set, setElementAt, setSize, size, sort, spliterator, subList, toArray, toArray, toString, trimToSize

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.Collection

parallelStream, stream, toArray

Field Detail

serialVersionUID

private static final long serialVersionUID

Use serialVersionUID for interoperability.

See Also:

Constant Field Values

Constructor Detail

VOILine

public VOILine()

Default Constructor.

VOILine

public VOILine(java.util.Vector<WildMagic.LibFoundation.Mathematics.Vector3f> kPositions)

Constructor, sets the position of the line.

Parameters:

kPositions -

VOILine

public VOILine(VOILine kVOI)

Copy Constructor.

Parameters:

kVOI -

Method Detail

clone

public VOILine clone()

Specified by:

clone in class VOIBase

getGeometricCenter

public WildMagic.LibFoundation.Mathematics.Vector3f getGeometricCenter()

Gets the geometric center of the contour.

Overrides:

getGeometricCenter in class VOIBase

Returns:

returns the geometric center

getPositionAndIntensity

public int getPositionAndIntensity(WildMagic.LibFoundation.Mathematics.Vector3f[] position,
                                   float[] intensity,
                                   float[] imageBuffer,
                                   int xD)

Gets the position/intensity along a line VOI.

Parameters:

position - array that is filled with all x coordinates

intensity - the corresponding intensities along the line

imageBuffer - DOCUMENT ME!

xD - x-Dimension of image

Returns:

the number of points in the position and intensity array that have a valid data.

translate

public void translate(float xT,
                      float yT)

Translate both points of the VOI.

Parameters:

xT - amount to translate in the x direction

yT - amount to translate in the y direction