Package gov.nih.mipav.model.algorithms.registration

Class AlgorithmConstrainedOAR3D.MatrixListItem

java.lang.Object
gov.nih.mipav.model.algorithms.registration.AlgorithmConstrainedOAR3D.MatrixListItem
All Implemented Interfaces:
Comparable<AlgorithmConstrainedOAR3D.MatrixListItem>
Enclosing class:
AlgorithmConstrainedOAR3D
class AlgorithmConstrainedOAR3D.MatrixListItem extends Object implements Comparable<AlgorithmConstrainedOAR3D.MatrixListItem>
Helper class to make it easy to store the necessary information about a minimum. Stores the "point", or vector at which the minimum was reached; the "cost", or value of the cost function at that minimum; and the matrix, which was the true input into the cost function and represents the transformation that gives the minimum cost of differences between the images. Implements Comparable, so that a list of MatrixListItems can be sorted using Java's sort.

  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    protected double
    cost
    Cost of function at this minimum.
    protected TransMatrixd
    halfMatrix
    Matrix with the best transformation divided by half.
    protected double[]
    initial
    Rotations, translations, scales, and skews that make up transformation.
    protected TransMatrixd
    matrix
    Matrix that gives best transformation.
    protected TransMatrixd
    midsagMatrix
    Matrix with the best transformation's z rot and xy translations.

  • Constructor Summary

    Constructors
    Modifier
    Constructor
    Description
    protected
    MatrixListItem(double _cost)
    Creates new minimum object, with identity transMatrix and a given cost.
    protected
    MatrixListItem(double _cost, TransMatrixd _matrix, double[] _initial)
    Creates new minimum object, setting the data and copying the point array explicitly.

  • Method Summary

    Modifier and Type
    Method
    Description
    int
    compareTo(AlgorithmConstrainedOAR3D.MatrixListItem o)
    Necessary to implement so that list may be sorted.
    String
    toAbridgedString()
    Creates string of this object with just first 6DOF and cost.
    String
    toString()
    Creates readable string of this object, including cost, matrix, and point with its meanings.

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Field Details

    • cost

      protected double cost
      Cost of function at this minimum.

    • halfMatrix

      protected TransMatrixd halfMatrix
      Matrix with the best transformation divided by half. Might be null.

    • initial

      protected double[] initial
      Rotations, translations, scales, and skews that make up transformation.

    • matrix

      protected TransMatrixd matrix
      Matrix that gives best transformation.

    • midsagMatrix

      protected TransMatrixd midsagMatrix
      Matrix with the best transformation's z rot and xy translations. Might be null.

  • Constructor Details

    • MatrixListItem

      protected MatrixListItem(double _cost)
      Creates new minimum object, with identity transMatrix and a given cost.
      Parameters:
      _cost - Cost of this minimum.

    • MatrixListItem

      protected MatrixListItem(double _cost, TransMatrixd _matrix, double[] _initial)
      Creates new minimum object, setting the data and copying the point array explicitly.
      Parameters:
      _cost - Cost of this minimum.
      _matrix - Matrix that gives best transformation.
      _initial - Rotations, translations, scales, and skews that make up transformation.

  • Method Details

    • compareTo

      public int compareTo(AlgorithmConstrainedOAR3D.MatrixListItem o)
      Necessary to implement so that list may be sorted. Returns -1 if this cost is less than the parameter's cost; 1 if this cost is greater than the parameter's cost; and 0 if they are equal.
      Specified by:
      compareTo in interface Comparable<AlgorithmConstrainedOAR3D.MatrixListItem>
      Parameters:
      o - MatrixListItem to compare to.
      Returns:
      -1 if this is less than, 1 if greater than, 0 if equal.

    • toAbridgedString

      public String toAbridgedString()
      Creates string of this object with just first 6DOF and cost.
      Returns:
      Readable string representation of this object.

    • toString

      public String toString()
      Creates readable string of this object, including cost, matrix, and point with its meanings.
      Overrides:
      toString in class Object
      Returns:
      Readable string representation of this object.