Difference between revisions of "DTI Pipeline Tutorials"
m (→Importing Philips PAR/REC files) |
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In the Import Data panel that appears, check the Use Active DWI box. | In the Import Data panel that appears, check the Use Active DWI box. | ||
− | Then, upload the file that contains gradient information, | + | Then, upload the file that contains gradient information. MIPAV reads the gradient information from the image header, or it can read it from the B-matrix file uploaded by the user. The gradient (or B-matrix) information is then displayed in the Gradient table. |
+ | |||
+ | '''Note:''' for the full list of image types and how MIPAV reads the header information, refer to [[DTI Pipeline#ImageTypes | Image Types]] section. | ||
== Importing Siemens Mosaic DCM images == | == Importing Siemens Mosaic DCM images == |
Revision as of 18:05, 31 May 2012
Main article: DTI Pipeline.
This is detailed tutorial(s) on how to use MIPAV DTI Pipeline. The page is currently under construction, but soon it will be populated with following tutorials:
Contents
Importing Philips PAR/REC files
Open A DWI volume of interest in MIPAV. Refer to Opening and loading image files if you are working with MIPAV for the first time.
In the Main menu, go to System Analysis > DTI Pipeline.
In the Import Data panel that appears, check the Use Active DWI box.
Then, upload the file that contains gradient information. MIPAV reads the gradient information from the image header, or it can read it from the B-matrix file uploaded by the user. The gradient (or B-matrix) information is then displayed in the Gradient table.
Note: for the full list of image types and how MIPAV reads the header information, refer to Image Types section.
Importing Siemens Mosaic DCM images
TBD.
Imploring Nifti with Philips Par File
TBD.
Video tutorials
TBD.