java.lang.Object
- java.awt.Component
- - java.awt.Container
  - - java.awt.Window
    - - java.awt.Dialog
      - javax.swing.JDialog
        
        gov.nih.mipav.view.dialogs.JDialogBase
        
        gov.nih.mipav.view.renderer.WildMagic.ProstateFramework.JDialogProstateExtractCEFeature

All Implemented Interfaces:

AlgorithmInterface, DialogDefaultsInterface, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants
```
public class JDialogProstateExtractCEFeature
extends JDialogBase
implements AlgorithmInterface
```
After the 3D images convert to 2D slices ( 512x512 ), this class picks the 2D slices, extracts the Coherence Enhanced diffusion based features, and saves those features with linear SVM readable file formats. User specifies the 2D slices saved directory as input, and the same directory as the output. The class automatically apply the following steps, 1) picks those slices, cropped region according to central prostate gland. 2) apply Coherence Enhanced filter to each cropped slice. 3) Save the Hurst index and Haralick features of each 2D slice to corresponding directory. Those saved CE features will be used to create linear SVM models. Also, for test cases, this class functions as the pre-processing steps to save CE features before automatic segmentation.

Author:

Ruida Cheng

See Also:

Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
  JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
- Nested classes/interfaces inherited from class javax.swing.JDialog
  javax.swing.JDialog.AccessibleJDialog
- Nested classes/interfaces inherited from class java.awt.Dialog
  java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
- Nested classes/interfaces inherited from class java.awt.Window
  java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
- Nested classes/interfaces inherited from class java.awt.Container
  java.awt.Container.AccessibleAWTContainer
- Nested classes/interfaces inherited from class java.awt.Component
  java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields
Modifier and Type	Field	Description
`private static int`	`Axial`
`private int`	`axis`
`private javax.swing.JComboBox`	`axisList`	axis region.
`private int`	`boxXmax`
`private int`	`boxXmin`
`private int`	`boxYmax`	cropped image boundary.
`private int`	`boxYmin`	cropped image boundary.
`private javax.swing.JButton`	`buttonKeyImage`
`private javax.swing.JButton`	`buttonSaveImage`
`private boolean`	`coherenceEnhancingDiffusionFilter`	Coherence Enhancing Diffusion filter.
`private static int`	`Coronal`
`private AlgorithmAddMargins`	`cropAlgo`	crop image algorithm
`private java.util.Vector<ModelImage>`	`cropKeyImages`	cropped key image, crop from 512x512 to central prostate gland region.
`private java.util.Vector<java.util.Vector<ModelImage>>`	`cropKeyImagesCE`	cropped CE image vector.
`static java.lang.String`	`featureDirName`
`private boolean`	`gaborFilter`	gabor filter.
`private boolean`	`gaussianFilter`	gussian filter.
`private boolean`	`gmFilter`	gradient magnitude filter.
`private int`	`haralickFeatureNumber`	Haralick feature numbers.
`private boolean`	`haralickFilter`	haralick filter.
`private boolean`	`hurstFilter`	Hurst index.
`private boolean`	`IHN3CorrectionFilter`	Inhomogeneity N3 correction.
`private boolean`	`imageIntensityFilter`	image intensity.
`private javax.swing.JPanel`	`imageSelectionPanel`	2D slices image selection panel.
`private boolean`	`invertFilter`	Haralick invert filter.
`private javax.swing.JFileChooser`	`keyImageChooser`	2D slice images file chooser.
`private java.lang.String`	`keyImageDirectory`	2D slices image directory.
`private java.util.Vector<ModelImage>`	`keyImages`	key images vector.
`private java.util.Vector<java.lang.String>`	`keyImageVector`	key images names vector.
`private java.util.Vector<VOI[]>`	`keyImageVOIs`	key image VOIs vector.
`private java.util.Vector<java.lang.String>`	`keyImageVOIVector`	key image VOI names vector.
`private javax.swing.JLabel`	`labelAxis`
`private javax.swing.JLabel`	`labelKeyImage`	2D Slices key image directory.
`private javax.swing.JLabel`	`labelSaveImage`	Save features directory.
`private boolean`	`meanFilter`	Haralick mean filter.
`private boolean`	`medianFilter`	Haralick median filter.
`private boolean`	`modeFilter`	Haralick mode filter.
`static java.lang.String`	`modelDirName`
`private int`	`numberFeatures`	number features being saved.
`private javax.swing.JRadioButton`	`radioButtonSVMBinary`	SVM option button.
`private javax.swing.JRadioButton`	`radioButtonSVMMulticlass`
`private boolean`	`regisotropicDiffusionFilter`	Anisotropic Diffusion filter.
`private static int`	`Saggital`
`private javax.swing.JFileChooser`	`saveImageChooser`	Saved features directory.
`private java.lang.String`	`saveImageDirectory`
`private static long`	`serialVersionUID`
`private boolean`	`svmTrainingBinary`	flag to indicate is SVM training with binary class or multi-class.
`private javax.swing.JTextField`	`textFieldKeyImage`
`private javax.swing.JTextField`	`textFieldSaveImage`
`private AlgorithmProstateFeaturesSaveAutoTrain`	`textureAlgo`	Algorithm to save Hurst index and Haralick features.
`private ViewUserInterface`	`UI`	The main user interface.
`private int`	`waveletFeatureNumber`	wavelet feature number.
`private boolean`	`waveletFilter`	Wavelet filter.
`private int[]`	`xBounds`	x dimension bounds
`private int[]`	`yBounds`	y dimension bound
`private int[]`	`zBounds`	z dimension bound

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager

Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors
Constructor Description

JDialogProstateExtractCEFeature(java.awt.Frame theParentFrame)
Constructor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`actionPerformed(java.awt.event.ActionEvent event)`	Action performed handler for this dialog.
`void`	`algorithmPerformed(AlgorithmBase algorithm)`	This method is required if the AlgorithmPerformed interface is implemented.
`void`	`buildKeyImagePanel()`	Build the panel.
`private void`	`calculateCoherenceEnhancingDiffusion()`	From the cropped images, apply Coherence Enhanced Diffusion filter to each 2D slices.
`private void`	`calculateNumberFeatures()`	Calculate number of features being saved.
`void`	`callAlgorithm()`	Driver to do automatic feature extraction.
`void`	`cropKeyImages()`	Crop the central prostate gland region from the 512x512 slices.
`void`	`disposeLocal()`	dispose memory.
`void`	`extractFeatures()`	Extract CE features.
`void`	`init()`	Dialog GUI initialization.
`void`	`printImages()`	debuger for file names read.
`private void`	`processDir(java.io.File dir)`	Process directory, save the image names and voi names.
`void`	`readFiles()`	read 2D slices directory.
`private void`	`readKeyImageDir()`	Read 2D slices.
`private void`	`recordSaveImageDir()`	Record the save 2D slice features directory.
`Features[]`	`saveFeatureSpaceValue(ModelImage resultImage, ModelImage classificationImage, ModelImage keyImage, ModelImage srcImage, int sliceNumber)`	Save CE features to user specified directory.
`private void`	`traverse(java.io.File dir)`	Traverse the 2D slices directory.

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - serialVersionUID
```
private static final long serialVersionUID
```
    See Also:
    
    Constant Field Values
  - UI
```
private ViewUserInterface UI
```
    The main user interface.
  - radioButtonSVMBinary
```
private javax.swing.JRadioButton radioButtonSVMBinary
```
    SVM option button.
  - radioButtonSVMMulticlass
```
private javax.swing.JRadioButton radioButtonSVMMulticlass
```
  - svmTrainingBinary
```
private boolean svmTrainingBinary
```
    flag to indicate is SVM training with binary class or multi-class.
  - boxYmin
```
private int boxYmin
```
    cropped image boundary.
  - boxYmax
```
private int boxYmax
```
    cropped image boundary.
  - boxXmin
```
private int boxXmin
```
  - boxXmax
```
private int boxXmax
```
  - xBounds
```
private int[] xBounds
```
    x dimension bounds
  - yBounds
```
private int[] yBounds
```
    y dimension bound
  - zBounds
```
private int[] zBounds
```
    z dimension bound
  - cropAlgo
```
private AlgorithmAddMargins cropAlgo
```
    crop image algorithm
  - textureAlgo
```
private AlgorithmProstateFeaturesSaveAutoTrain textureAlgo
```
    Algorithm to save Hurst index and Haralick features.
  - imageIntensityFilter
```
private boolean imageIntensityFilter
```
    image intensity.
  - coherenceEnhancingDiffusionFilter
```
private boolean coherenceEnhancingDiffusionFilter
```
    Coherence Enhancing Diffusion filter.
  - regisotropicDiffusionFilter
```
private boolean regisotropicDiffusionFilter
```
    Anisotropic Diffusion filter.
  - IHN3CorrectionFilter
```
private boolean IHN3CorrectionFilter
```
    Inhomogeneity N3 correction.
  - modeFilter
```
private boolean modeFilter
```
    Haralick mode filter.
  - meanFilter
```
private boolean meanFilter
```
    Haralick mean filter.
  - medianFilter
```
private boolean medianFilter
```
    Haralick median filter.
  - invertFilter
```
private boolean invertFilter
```
    Haralick invert filter.
  - haralickFilter
```
private boolean haralickFilter
```
    haralick filter.
  - gaborFilter
```
private boolean gaborFilter
```
    gabor filter.
  - hurstFilter
```
private boolean hurstFilter
```
    Hurst index.
  - waveletFilter
```
private boolean waveletFilter
```
    Wavelet filter.
  - gaussianFilter
```
private boolean gaussianFilter
```
    gussian filter.
  - gmFilter
```
private boolean gmFilter
```
    gradient magnitude filter.
  - numberFeatures
```
private int numberFeatures
```
    number features being saved.
  - haralickFeatureNumber
```
private int haralickFeatureNumber
```
    Haralick feature numbers.
  - labelKeyImage
```
private javax.swing.JLabel labelKeyImage
```
    2D Slices key image directory.
  - textFieldKeyImage
```
private javax.swing.JTextField textFieldKeyImage
```
  - buttonKeyImage
```
private javax.swing.JButton buttonKeyImage
```
  - imageSelectionPanel
```
private javax.swing.JPanel imageSelectionPanel
```
    2D slices image selection panel.
  - keyImageChooser
```
private javax.swing.JFileChooser keyImageChooser
```
    2D slice images file chooser.
  - keyImageDirectory
```
private java.lang.String keyImageDirectory
```
    2D slices image directory.
  - axisList
```
private javax.swing.JComboBox axisList
```
    axis region.
  - labelAxis
```
private javax.swing.JLabel labelAxis
```
  - Axial
```
private static int Axial
```
  - Saggital
```
private static int Saggital
```
  - Coronal
```
private static int Coronal
```
  - axis
```
private int axis
```
  - waveletFeatureNumber
```
private int waveletFeatureNumber
```
    wavelet feature number.
  - keyImageVector
```
private java.util.Vector<java.lang.String> keyImageVector
```
    key images names vector.
  - keyImages
```
private java.util.Vector<ModelImage> keyImages
```
    key images vector.
  - keyImageVOIVector
```
private java.util.Vector<java.lang.String> keyImageVOIVector
```
    key image VOI names vector.
  - keyImageVOIs
```
private java.util.Vector<VOI[]> keyImageVOIs
```
    key image VOIs vector.
  - cropKeyImages
```
private java.util.Vector<ModelImage> cropKeyImages
```
    cropped key image, crop from 512x512 to central prostate gland region.
  - cropKeyImagesCE
```
private java.util.Vector<java.util.Vector<ModelImage>> cropKeyImagesCE
```
    cropped CE image vector.
  - modelDirName
```
public static final java.lang.String modelDirName
```
    See Also:
    
    Constant Field Values
  - featureDirName
```
public static final java.lang.String featureDirName
```
    See Also:
    
    Constant Field Values
  - labelSaveImage
```
private javax.swing.JLabel labelSaveImage
```
    Save features directory.
  - textFieldSaveImage
```
private javax.swing.JTextField textFieldSaveImage
```
  - buttonSaveImage
```
private javax.swing.JButton buttonSaveImage
```
  - saveImageChooser
```
private javax.swing.JFileChooser saveImageChooser
```
    Saved features directory.
  - saveImageDirectory
```
private java.lang.String saveImageDirectory
```
- Constructor Detail
  - JDialogProstateExtractCEFeature
```
public JDialogProstateExtractCEFeature(java.awt.Frame theParentFrame)
```
    Constructor.
    
    Parameters:
    
    theParentFrame -
- Method Detail
  - disposeLocal
```
public void disposeLocal()
```
    dispose memory.
  - calculateNumberFeatures
```
private void calculateNumberFeatures()
```
    Calculate number of features being saved. Currently, only Hurst index and Haralick features being used.
  - actionPerformed
```
public void actionPerformed(java.awt.event.ActionEvent event)
```
    Action performed handler for this dialog.
    
    Specified by:
    
    actionPerformed in interface java.awt.event.ActionListener
    
    Overrides:
    
    actionPerformed in class JDialogBase
  - recordSaveImageDir
```
private void recordSaveImageDir()
```
    Record the save 2D slice features directory.
  - readKeyImageDir
```
private void readKeyImageDir()
```
    Read 2D slices.
  - printImages
```
public void printImages()
```
    debuger for file names read.
  - traverse
```
private void traverse(java.io.File dir)
```
    Traverse the 2D slices directory.
    
    Parameters:
    
    dir -
  - processDir
```
private void processDir(java.io.File dir)
```
    Process directory, save the image names and voi names.
    
    Parameters:
    
    dir -
  - algorithmPerformed
```
public void algorithmPerformed(AlgorithmBase algorithm)
```
    This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
    
    Specified by:
    
    algorithmPerformed in interface AlgorithmInterface
    
    Parameters:
    
    algorithm - Algorithm that caused the event.
  - callAlgorithm
```
public void callAlgorithm()
```
    Driver to do automatic feature extraction.
  - calculateCoherenceEnhancingDiffusion
```
private void calculateCoherenceEnhancingDiffusion()
```
    From the cropped images, apply Coherence Enhanced Diffusion filter to each 2D slices.
  - cropKeyImages
```
public void cropKeyImages()
```
    Crop the central prostate gland region from the 512x512 slices.
  - readFiles
```
public void readFiles()
```
    read 2D slices directory.
  - extractFeatures
```
public void extractFeatures()
```
    Extract CE features.
  - saveFeatureSpaceValue
```
public Features[] saveFeatureSpaceValue(ModelImage resultImage,
                                        ModelImage classificationImage,
                                        ModelImage keyImage,
                                        ModelImage srcImage,
                                        int sliceNumber)
```
    Save CE features to user specified directory.
    
    Parameters:
    
    resultImage - result image from feature extraction algorithm.
    
    classificationImage - corresponding class +1 or -1.
    
    keyImage - cropped key image
    
    srcImage - corresponding src image
    
    sliceNumber - slice number
    
    Returns:
    
    Feature vectors for the 2D slices.
  - init
```
public void init()
```
    Dialog GUI initialization.
  - buildKeyImagePanel
```
public void buildKeyImagePanel()
```
    Build the panel.

Class JDialogProstateExtractCEFeature

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Nested classes/interfaces inherited from class javax.swing.JDialog

Nested classes/interfaces inherited from class java.awt.Dialog

Nested classes/interfaces inherited from class java.awt.Window

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Field Summary

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Fields inherited from class javax.swing.JDialog

Fields inherited from class java.awt.Dialog

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Fields inherited from interface javax.swing.WindowConstants

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Methods inherited from class javax.swing.JDialog

Methods inherited from class java.awt.Dialog

Methods inherited from class java.awt.Window

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Field Detail

serialVersionUID

UI

radioButtonSVMBinary

radioButtonSVMMulticlass

svmTrainingBinary

boxYmin

boxYmax

boxXmin

boxXmax

xBounds

yBounds

zBounds

cropAlgo

textureAlgo

imageIntensityFilter

coherenceEnhancingDiffusionFilter

regisotropicDiffusionFilter

IHN3CorrectionFilter

modeFilter

meanFilter

medianFilter

invertFilter

haralickFilter

gaborFilter

hurstFilter

waveletFilter

gaussianFilter

gmFilter

numberFeatures

haralickFeatureNumber

labelKeyImage

textFieldKeyImage

buttonKeyImage

imageSelectionPanel

keyImageChooser

keyImageDirectory

axisList

labelAxis

Axial

Saggital

Coronal

axis

waveletFeatureNumber

keyImageVector

keyImages

keyImageVOIVector

keyImageVOIs

cropKeyImages

cropKeyImagesCE

modelDirName

featureDirName

labelSaveImage

textFieldSaveImage

buttonSaveImage

saveImageChooser