Package gov.nih.mipav.view.renderer.WildMagic.ProstateFramework

Class JDialogProstate2DHEDmapSPIE_2017

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.renderer.WildMagic.ProstateFramework.JDialogProstate2DHEDmapSPIE_2017
All Implemented Interfaces:
AlgorithmInterface, DialogDefaultsInterface, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogProstate2DHEDmapSPIE_2017 extends JDialogBase implements AlgorithmInterface
This class generates the VOIs from HED prediction maps. The maps are from HED generated MRI energy maps(no CED maps involved).
Author:
Ruida Cheng
See Also:

  • Field Details

  • Constructor Details

    • JDialogProstate2DHEDmapSPIE_2017

      public JDialogProstate2DHEDmapSPIE_2017(Frame theParentFrame)
      Constructor.
      Parameters:
      theParentFrame -

  • Method Details

    • disposeLocal

      public void disposeLocal()
      dispose memory

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Dialog local actionPerformed handler.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase

    • sortImageTable

      private void sortImageTable()

    • recordSaveImageDir

      private void recordSaveImageDir()
      Let user specify the saved 2D slices atlas, record the save directory.

    • readKeyImageDir

      private void readKeyImageDir()
      Read 3D images atlas directory.

    • traverse_folder_org_img

      private void traverse_folder_org_img(File dir)

    • processDir_folder_org_img

      private void processDir_folder_org_img(File dir)

    • sortKeyImage_OrigImg

      public void sortKeyImage_OrigImg()

    • traverse_folder_map

      private void traverse_folder_map(File dir)

    • traverse_folder_map

      private void traverse_folder_map(File dir, int index)

    • processDir_folder_map

      private void processDir_folder_map(File dir, int index)

    • sortKeyImage_Map

      public void sortKeyImage_Map()

    • printImages

      public void printImages()
      Debugger for test the image and VOis reading.

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • callAlgorithm

      public void callAlgorithm()
      Driver function to read image and VOIs, and convert each 3D image to 2D slices.

    • generateContours

      private void generateContours()

    • smoothVOI60

      public void smoothVOI60(ModelImage maskImage, ModelImage resultImage)
      Smooth VOIs to 60 points.
      Parameters:
      maskImage -
      resultImage -

    • smoothVOI30

      public void smoothVOI30(ModelImage maskImage, ModelImage resultImage)

    • loadFiles

      public void loadFiles()
      load image files and voi files

    • deleteDir

      public static boolean deleteDir(File dir)
      Debugger to test dir deletion.
      Parameters:
      dir -
      Returns:

    • readFile

      public void readFile()

    • init

      public void init()
      Initial panel

    • buildKeyImagePanel

      public void buildKeyImagePanel()
      Panel contains both the 3D image dir and saved 2D slices atlas dir.