Package gov.nih.mipav.view.renderer.WildMagic.ProstateFramework

Class JDialogProstate2DHEDmapMICCAI_conversion

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.renderer.WildMagic.ProstateFramework.JDialogProstate2DHEDmapMICCAI_conversion
All Implemented Interfaces:
AlgorithmInterface, DialogDefaultsInterface, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogProstate2DHEDmapMICCAI_conversion extends JDialogBase implements AlgorithmInterface
This class generates the VOIs from HED prediction maps. Only takes MRI transformed images into concern, no CED involved. The transformed images are isotropic in x, y direction.
Author:
Ruida Cheng
See Also:

  • Field Details

  • Constructor Details

    • JDialogProstate2DHEDmapMICCAI_conversion

      public JDialogProstate2DHEDmapMICCAI_conversion(Frame theParentFrame)
      Constructor.
      Parameters:
      theParentFrame -

  • Method Details

    • disposeLocal

      public void disposeLocal()
      dispose memory

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Dialog local actionPerformed handler.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase

    • sortImageTable

      private void sortImageTable()

    • recordSaveImageDir

      private void recordSaveImageDir()
      Let user specify the saved 2D slices atlas, record the save directory.

    • readKeyImageDir

      private void readKeyImageDir()
      Read 3D images atlas directory.

    • traverse_folder_1

      private void traverse_folder_1(File dir)

    • processDir_folder_1

      private void processDir_folder_1(File dir)

    • sortKeyImage_1

      public void sortKeyImage_1()

    • traverse_folder_5

      private void traverse_folder_5(File dir)

    • traverse_folder_5

      private void traverse_folder_5(File dir, int index)

    • processDir_folder_5

      private void processDir_folder_5(File dir, int index)

    • sortKeyImage_5

      public void sortKeyImage_5()

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • callAlgorithm

      public void callAlgorithm()
      Driver function to read image and VOIs, and convert each 3D image to 2D slices.

    • generateContours

      private void generateContours()

    • smoothVOI30

      public void smoothVOI30(ModelImage maskImage, ModelImage resultImage)

    • loadFiles

      public void loadFiles()
      load image files and voi files

    • readFile

      public void readFile()

    • init

      public void init()
      Initial panel

    • buildKeyImagePanel

      public void buildKeyImagePanel()
      Panel contains both the 3D image dir and saved 2D slices atlas dir.