Class JDialogGenerateEndingSlices
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.renderer.WildMagic.ProstateFramework.JDialogGenerateEndingSlices
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- All Implemented Interfaces:
AlgorithmInterface
,DialogDefaultsInterface
,java.awt.event.ActionListener
,java.awt.event.FocusListener
,java.awt.event.ItemListener
,java.awt.event.WindowListener
,java.awt.image.ImageObserver
,java.awt.MenuContainer
,java.io.Serializable
,java.util.EventListener
,javax.accessibility.Accessible
,javax.swing.RootPaneContainer
,javax.swing.WindowConstants
public class JDialogGenerateEndingSlices extends JDialogBase implements AlgorithmInterface
- See Also:
- Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private static int
Axial
private int
axis
private javax.swing.JComboBox
axisList
private int
boxXmax
private int
boxXmin
private int
boxYmax
private int
boxYmin
private javax.swing.JButton
buttonKeyImage
private javax.swing.JButton
buttonSaveImage
private static int
Coronal
private AlgorithmAddMargins
cropAlgo
DOCUMENT ME!private ModelImage
cropImage
DOCUMENT ME!private java.util.Vector<ModelImage>
cropKeyImages
static java.lang.String
featureDirName
private javax.swing.ButtonGroup
group
private ModelImage
image
DOCUMENT ME!private javax.swing.JPanel
imageSelectionPanel
private javax.swing.JFileChooser
keyImageChooser
private java.lang.String
keyImageDirectory
private java.lang.String
keyImageName
private java.util.Vector<ModelImage>
keyImages
private java.util.Vector<java.lang.String>
keyImageVector
private java.util.Vector<VOI[]>
keyImageVOIs
private java.util.Vector<java.lang.String>
keyImageVOIVector
private javax.swing.JLabel
labelAxis
private javax.swing.JLabel
labelKeyImage
private javax.swing.JLabel
labelSaveImage
static java.lang.String
modelDirName
private java.util.Vector<java.util.Vector<java.lang.String>>
modelList
private javax.swing.JRadioButton
radioButtonSVMBinary
private javax.swing.JRadioButton
radioButtonSVMMulticlass
private static int
Saggital
private javax.swing.JFileChooser
saveImageChooser
private java.lang.String
saveImageDirectory
private java.lang.String
saveImageName
private javax.swing.JPanel
svmOptionsPanel
private javax.swing.JTextField
textFieldKeyImage
private javax.swing.JTextField
textFieldSaveImage
private javax.swing.JPanel
trainGroupPanel
private javax.swing.JTextField
trainGroupTextfield
private ViewUserInterface
UI
The main user interface.private int[]
xBounds
DOCUMENT ME!private int[]
yBounds
DOCUMENT ME!private int[]
zBounds
DOCUMENT ME!-
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogGenerateEndingSlices(java.awt.Frame theParentFrame, ModelImage im)
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description void
actionPerformed(java.awt.event.ActionEvent event)
void
algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented.void
buildKeyImagePanel()
void
buildSVMoptionsPanel()
void
buildTrainGroupPanel()
void
callAlgorithm()
void
cropKeyImages()
static boolean
deleteDir(java.io.File dir)
void
disposeLocal()
void
init()
void
loadFiles()
load image files and voi filesprivate void
processDir(java.io.File dir)
private void
processDir_100(java.io.File dir)
private void
processDir_80(java.io.File dir)
void
readFiles()
private void
readKeyImageDir()
private void
recordSaveImageDir()
void
removeModelDir()
void
saveImages()
void
sortKeyImage()
private void
traverse(java.io.File dir)
private void
traverse_100(java.io.File dir)
private void
traverse_80(java.io.File dir)
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Field Detail
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image
private ModelImage image
DOCUMENT ME!
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UI
private ViewUserInterface UI
The main user interface.
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svmOptionsPanel
private javax.swing.JPanel svmOptionsPanel
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trainGroupPanel
private javax.swing.JPanel trainGroupPanel
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trainGroupTextfield
private javax.swing.JTextField trainGroupTextfield
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radioButtonSVMBinary
private javax.swing.JRadioButton radioButtonSVMBinary
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radioButtonSVMMulticlass
private javax.swing.JRadioButton radioButtonSVMMulticlass
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group
private javax.swing.ButtonGroup group
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boxYmin
private int boxYmin
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boxYmax
private int boxYmax
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boxXmin
private int boxXmin
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boxXmax
private int boxXmax
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xBounds
private int[] xBounds
DOCUMENT ME!
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yBounds
private int[] yBounds
DOCUMENT ME!
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zBounds
private int[] zBounds
DOCUMENT ME!
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cropAlgo
private AlgorithmAddMargins cropAlgo
DOCUMENT ME!
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cropImage
private ModelImage cropImage
DOCUMENT ME!
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labelKeyImage
private javax.swing.JLabel labelKeyImage
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textFieldKeyImage
private javax.swing.JTextField textFieldKeyImage
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buttonKeyImage
private javax.swing.JButton buttonKeyImage
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imageSelectionPanel
private javax.swing.JPanel imageSelectionPanel
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keyImageChooser
private javax.swing.JFileChooser keyImageChooser
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keyImageName
private java.lang.String keyImageName
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keyImageDirectory
private java.lang.String keyImageDirectory
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axisList
private javax.swing.JComboBox axisList
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labelAxis
private javax.swing.JLabel labelAxis
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Axial
private static int Axial
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Saggital
private static int Saggital
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Coronal
private static int Coronal
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axis
private int axis
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keyImageVector
private java.util.Vector<java.lang.String> keyImageVector
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keyImages
private java.util.Vector<ModelImage> keyImages
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keyImageVOIVector
private java.util.Vector<java.lang.String> keyImageVOIVector
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keyImageVOIs
private java.util.Vector<VOI[]> keyImageVOIs
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cropKeyImages
private java.util.Vector<ModelImage> cropKeyImages
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modelDirName
public static final java.lang.String modelDirName
- See Also:
- Constant Field Values
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featureDirName
public static final java.lang.String featureDirName
- See Also:
- Constant Field Values
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modelList
private java.util.Vector<java.util.Vector<java.lang.String>> modelList
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labelSaveImage
private javax.swing.JLabel labelSaveImage
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textFieldSaveImage
private javax.swing.JTextField textFieldSaveImage
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buttonSaveImage
private javax.swing.JButton buttonSaveImage
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saveImageChooser
private javax.swing.JFileChooser saveImageChooser
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saveImageName
private java.lang.String saveImageName
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saveImageDirectory
private java.lang.String saveImageDirectory
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Constructor Detail
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JDialogGenerateEndingSlices
public JDialogGenerateEndingSlices(java.awt.Frame theParentFrame, ModelImage im)
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Method Detail
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disposeLocal
public void disposeLocal()
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actionPerformed
public void actionPerformed(java.awt.event.ActionEvent event)
- Specified by:
actionPerformed
in interfacejava.awt.event.ActionListener
- Overrides:
actionPerformed
in classJDialogBase
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recordSaveImageDir
private void recordSaveImageDir()
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readKeyImageDir
private void readKeyImageDir()
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traverse_80
private void traverse_80(java.io.File dir)
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processDir_80
private void processDir_80(java.io.File dir)
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traverse_100
private void traverse_100(java.io.File dir)
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processDir_100
private void processDir_100(java.io.File dir)
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sortKeyImage
public void sortKeyImage()
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traverse
private void traverse(java.io.File dir)
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processDir
private void processDir(java.io.File dir)
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformed
in interfaceAlgorithmInterface
- Parameters:
algorithm
- Algorithm that caused the event.
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callAlgorithm
public void callAlgorithm()
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saveImages
public void saveImages()
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cropKeyImages
public void cropKeyImages()
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loadFiles
public void loadFiles()
load image files and voi files
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removeModelDir
public void removeModelDir()
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deleteDir
public static boolean deleteDir(java.io.File dir)
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readFiles
public void readFiles()
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init
public void init()
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buildKeyImagePanel
public void buildKeyImagePanel()
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buildTrainGroupPanel
public void buildTrainGroupPanel()
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buildSVMoptionsPanel
public void buildSVMoptionsPanel()
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