Class CDOptimizeSA
java.lang.Object
gov.nih.mipav.view.renderer.WildMagic.AAM.CDOptimizeBase
gov.nih.mipav.view.renderer.WildMagic.AAM.CDOptimizeSA
This is the Java modified version of C++ active appearance model API
(AAM_API). It is modified with a subset of required functions for automatic
MRI prostate segmentation.
AAM-API LICENSE - file: license.txt
This software is freely available for non-commercial use such as
research and education. Please see the full disclaimer below.
All publications describing work using this software should cite
the reference given below.
Copyright (c) 2000-2003 Mikkel B. Stegmann, mbs@imm.dtu.dk
IMM, Informatics invalid input: '&' Mathematical Modelling
DTU, Technical University of Denmark
Richard Petersens Plads, Building 321
DK-2800 Lyngby, Denmark
http://www.imm.dtu.dk/~aam/
REFERENCES
Please use the reference below, when writing articles, reports etc. where
the AAM-API has been used. A draft version the article is available from
the homepage.
I will be happy to receive pre- or reprints of such articles.
/Mikkel
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M. B. Stegmann, B. K. Ersboll, R. Larsen, "FAME -- A Flexible Appearance
Modelling Environment", IEEE Transactions on Medical Imaging, IEEE, 2003
(to appear)
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3RD PART SOFTWARE
The software is partly based on the following libraries:
- The Microsoft(tm) Vision Software Developers Kit, VisSDK
- LAPACK
DISCLAIMER
This software is provided 'as-is', without any express or implied warranty.
In no event will the author be held liable for any damages arising from the
use of this software.
Permission is granted to anyone to use this software for any non-commercial
purpose, and to alter it, subject to the following restrictions:
1. The origin of this software must not be misrepresented; you must not claim
that you wrote the original software.
2. Altered source versions must be plainly marked as such, and must not be
misrepresented as being the original software.
3. This notice may not be removed or altered from any source distribution.
--
No guarantees of performance accompany this software, nor is any
responsibility assumed on the part of the author or IMM.
This software is provided by Mikkel B. Stegmann and IMM ``as is'' and any
express or implied warranties, including, but not limited to, the implied
warranties of merchantability and fitness for a particular purpose are
disclaimed. In no event shall IMM or Mikkel B. Stegmann be liable for any
direct, indirect, incidental, special, exemplary, or consequential damages
(including, but not limited to, procurement of substitute goods or services;
loss of use, data, or profits; or business interruption) however caused and
on any theory of liability, whether in contract, strict liability, or tort
(including negligence or otherwise) arising in any way out of the use of
this software, even if advised of the possibility of such damage.
$Revision: 1.4 $
$Date: 2003/04/23 14:49:15 $
IMM, Department of Mathematical Modelling Technical University of Denmark,
Building 321 DK-2800 Lyngby, Denmark http://www.imm.dtu.dk/~diva
author: Rune Fisker
Header-file for the simulated annealing optimization class. Simulated
annealing [1,2] is implemented with the Metroplis algorithm [3], random walk
and temperature scheme T_t+1 = k T_t [1]
[1] Kirkpatrick, S. and Gellant, C. D. and Vecchi, M. P., Optimization by
simulated annealing, Science, 1983, vol. 220, pp.671-680
[2] Cerny, V., Thermodynamical approach to the traveling salesman problem: an efficient
simulation algorithm}, Jour. of Optimization Theory and Applications, 1985,
vol. 45, pp. 41-45
[3] Metropolis, N. and Rosenbluth, A. W. and Rosenbluth, M. N. and Teller A. H. and
Teller E., Equations of state calculations by fast
computing machines, Jour. Chemical Physics, 1953, 21, 1087-1092
- Author:
- Ruida Cheng
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic intstatic intintstatic intprivate doubledecrease factor in the temperature scheme.private doublestart temperature.private intflag for random seed in random walk.static intFields inherited from class gov.nih.mipav.view.renderer.WildMagic.AAM.CDOptimizeBase
CentralDifference, ENumGrad, eoptBFGS, eoptConjugateGradient, EOptMethod, eoptPatternSearch, eoptSimulatedAnnealing, eoptSteepestDescent, eoptUnknown, ETermCode, etermConsecMaxStepMax, etermDeltaFuncVal, etermGradTol, etermLineSearch, etermMaxFuncEval, etermMaxIterations, etermNoStop, etermStepTol, etermUnknown, FitLine, ForwardDifference, m_dDeltaFuncVal, m_dEta, m_dGradTol, m_dMachEps, m_dMaxStep, m_dStepTol, m_dTypF, m_eNumGrad, m_fAnalyticGrad, m_fLogFuncValues, m_iStopCriteria, m_nConsecMax, m_nConsecMaxStepMax, m_nFDigits, m_nFuncEval, m_nGradEval, m_nIterations, m_vFuncVal, m_vNFuncEval, m_vvFuncParm -
Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptiondoubleDecFac()get decreasing factor.voiddispose()dispose memory.doubleGauss()make randomize gauss.intMinimize(CDVector x, CDOptimizeFuncBase pFuncEvalBase) minimization using steepest annealing.Name()name of optimization method.intoptimizaitn method type.intflag for random seed in random walk.voidSetDecFac(double dK) decrease factor in the temperature scheme.voidSetRandomSeed(int eSeedToRand) get random seeding flag.voidSetStartTemperature(double dStartTemperature) start temperature.doubleget start tempature.Methods inherited from class gov.nih.mipav.view.renderer.WildMagic.AAM.CDOptimizeBase
EvalFunction, EvalGradient, ExactLineSearch, GetFuncEvalBase, LineSearch, LineSearch, MaxFuncEval, MaxIterations, MethodPar, MinimizeNum, NumGrad, SetFuncEvalBase, SetMachineEps, SetMaxFuncEval, SetMaxIterations, SetMethodPar, SoftLineSearch, UmStop, UmStop0
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Field Details
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RAND_MAX
public static int RAND_MAX -
eSeedToRandom
public int eSeedToRandom -
eseedNo
public static int eseedNo -
eseedRandom
public static int eseedRandom -
essedConstant
public static int essedConstant -
m_dStartTemperature
private double m_dStartTemperaturestart temperature. -
m_dK
private double m_dKdecrease factor in the temperature scheme. -
m_eSeedToRand
private int m_eSeedToRandflag for random seed in random walk.
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Constructor Details
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CDOptimizeSA
public CDOptimizeSA()constructor.
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Method Details
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dispose
public void dispose()dispose memory. -
Name
name of optimization method.- Overrides:
Namein classCDOptimizeBase- Returns:
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OptMethod
public int OptMethod()optimizaitn method type.- Overrides:
OptMethodin classCDOptimizeBase
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SetStartTemperature
public void SetStartTemperature(double dStartTemperature) start temperature. -
StartTemperature
public double StartTemperature()get start tempature. -
SetDecFac
public void SetDecFac(double dK) decrease factor in the temperature scheme. -
DecFac
public double DecFac()get decreasing factor. -
RandomSeed
public int RandomSeed()flag for random seed in random walk. -
SetRandomSeed
public void SetRandomSeed(int eSeedToRand) get random seeding flag. -
Minimize
minimization using steepest annealing.- Specified by:
Minimizein classCDOptimizeBase- Parameters:
x-pFuncEvalBase-- Returns:
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Gauss
public double Gauss()make randomize gauss.
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