Package gov.nih.mipav.view.dialogs

Class JDialogSM2

    • Nested Class Summary

      • Nested classes/interfaces inherited from class javax.swing.JDialog

        javax.swing.JDialog.AccessibleJDialog

      • Nested classes/interfaces inherited from class java.awt.Dialog

        java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType

      • Nested classes/interfaces inherited from class java.awt.Window

        java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

      • Nested classes/interfaces inherited from class java.awt.Container

        java.awt.Container.AccessibleAWTContainer

      • Nested classes/interfaces inherited from class java.awt.Component

        java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

    • Constructor Summary

      Constructors 
      Constructor Description
      JDialogSM2​(ModelImage image)
      Creates a new JDialogSM2 object.
      JDialogSM2​(java.awt.Frame theParentFrame, ModelImage im)
      Creates new dialog.

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void actionPerformed​(java.awt.event.ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      void algorithmPerformed​(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented.
      protected void callAlgorithm()
      DOCUMENT ME!
      ParameterTable createInputParameters()
      Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
      ParameterTable createOutputParameters()
      Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
      protected void doPostAlgorithmActions()
      Store the result image in the script runner's image table now that the action execution is finished.
      ActionMetadata getActionMetadata()
      Return meta-information about this discoverable action for categorization and labeling purposes.
      java.lang.String getOutputImageName​(java.lang.String imageParamName)
      Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
      ModelImage[] getResultImage()
      Accessor that returns the image.
      private void init()
      Initializes GUI components and displays dialog.
      boolean isActionComplete()
      Returns whether the action has successfully completed its execution.
      void itemStateChanged​(java.awt.event.ItemEvent event)
      itemStateChanged.
      protected void setGUIFromParams()
      Set up the dialog GUI based on the parameters before running the algorithm as part of a script.
      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      protected void storeParamsFromGUI()
      Store the parameters from the dialog to record the execution of this algorithm.
      void windowClosing​(java.awt.event.WindowEvent event)
      Disposes of error dialog, then frame.

      • Methods inherited from class javax.swing.JDialog

        addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

      • Methods inherited from class java.awt.Dialog

        addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

      • Methods inherited from class java.awt.Window

        addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

      • Methods inherited from class java.awt.Container

        add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

      • Methods inherited from class java.awt.Component

        action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

      • Methods inherited from interface java.awt.event.WindowListener

        windowActivated, windowClosed, windowDeactivated, windowDeiconified, windowIconified, windowOpened

    • Field Detail

      • labelParamsToFit

        private javax.swing.JLabel labelParamsToFit
        Use serialVersionUID for interoperability.

      • buttonTissueFile

        private javax.swing.JButton buttonTissueFile

      • textTissueFile

        private javax.swing.JTextField textTissueFile

      • directoryTissue

        private java.lang.String directoryTissue

      • fileNameTissue

        private java.lang.String fileNameTissue

      • labelVOI

        private javax.swing.JLabel labelVOI

      • buttonVOIFile

        private javax.swing.JButton buttonVOIFile

      • textVOIFile

        private javax.swing.JTextField textVOIFile

      • directoryVOI

        private java.lang.String directoryVOI

      • fileNameVOI

        private java.lang.String fileNameVOI

      • buttonVOIFile2

        private javax.swing.JButton buttonVOIFile2

      • textVOIFile2

        private javax.swing.JTextField textVOIFile2

      • directoryVOI2

        private java.lang.String directoryVOI2

      • fileNameVOI2

        private java.lang.String fileNameVOI2

      • buttonTimesFile

        private javax.swing.JButton buttonTimesFile

      • textTimesFile

        private javax.swing.JTextField textTimesFile

      • directoryTimes

        private java.lang.String directoryTimes

      • fileNameTimes

        private java.lang.String fileNameTimes

      • fileTimes

        private java.io.File fileTimes

      • numTimes

        private int numTimes

      • timeVals

        private double[] timeVals

      • labelMinConstr0

        private javax.swing.JLabel labelMinConstr0

      • textMinConstr0

        private javax.swing.JTextField textMinConstr0

      • labelMaxConstr0

        private javax.swing.JLabel labelMaxConstr0

      • textMaxConstr0

        private javax.swing.JTextField textMaxConstr0

      • labelInitial0

        private javax.swing.JLabel labelInitial0

      • textInitial0

        private javax.swing.JTextField textInitial0

      • labelMinConstr1

        private javax.swing.JLabel labelMinConstr1

      • textMinConstr1

        private javax.swing.JTextField textMinConstr1

      • labelMaxConstr1

        private javax.swing.JLabel labelMaxConstr1

      • labelInitial1

        private javax.swing.JLabel labelInitial1

      • textInitial1

        private javax.swing.JTextField textInitial1

      • textMaxConstr1

        private javax.swing.JTextField textMaxConstr1

      • labelMinConstr2

        private javax.swing.JLabel labelMinConstr2

      • textMinConstr2

        private javax.swing.JTextField textMinConstr2

      • labelMaxConstr2

        private javax.swing.JLabel labelMaxConstr2

      • textMaxConstr2

        private javax.swing.JTextField textMaxConstr2

      • labelInitial2

        private javax.swing.JLabel labelInitial2

      • textInitial2

        private javax.swing.JTextField textInitial2

      • min_constr

        private double[] min_constr

      • max_constr

        private double[] max_constr

      • initial

        private double[] initial

      • labelHematocrit

        private javax.swing.JLabel labelHematocrit

      • textHematocrit

        private javax.swing.JTextField textHematocrit

      • hematocrit

        private double hematocrit

      • voi

        private VOI[] voi

      • fileVOI2

        private FileVOI fileVOI2

      • voi2

        private VOI[] voi2

      • br

        private java.io.BufferedReader br

      • VOIGroup

        private javax.swing.ButtonGroup VOIGroup

      • sagittalSinusButton

        private javax.swing.JRadioButton sagittalSinusButton

      • processRegionButton

        private javax.swing.JRadioButton processRegionButton

      • sagittalSinusIndex

        private int sagittalSinusIndex

      • processRegionIndex

        private int processRegionIndex

    • Constructor Detail

      • JDialogSM2

        public JDialogSM2​(ModelImage image)
        Creates a new JDialogSM2 object.
        Parameters:
        image - DOCUMENT ME!

      • JDialogSM2

        public JDialogSM2​(java.awt.Frame theParentFrame,
                  ModelImage im)
        Creates new dialog.
        Parameters:
        theParentFrame - Parent frame
        im - Source image

    • Method Detail

      • actionPerformed

        public void actionPerformed​(java.awt.event.ActionEvent event)
        Closes dialog box when the OK button is pressed and calls the algorithm.
        Specified by:
        actionPerformed in interface java.awt.event.ActionListener
        Overrides:
        actionPerformed in class JDialogBase
        Parameters:
        event - Event that triggers function.

      • algorithmPerformed

        public void algorithmPerformed​(AlgorithmBase algorithm)
        This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
        Specified by:
        algorithmPerformed in interface AlgorithmInterface
        Parameters:
        algorithm - Algorithm that caused the event.

      • setGUIFromParams

        protected void setGUIFromParams()
        Set up the dialog GUI based on the parameters before running the algorithm as part of a script.
        Specified by:
        setGUIFromParams in class JDialogScriptableBase

      • itemStateChanged

        public void itemStateChanged​(java.awt.event.ItemEvent event)
        itemStateChanged.
        Specified by:
        itemStateChanged in interface java.awt.event.ItemListener
        Overrides:
        itemStateChanged in class JDialogBase
        Parameters:
        event - DOCUMENT ME!

      • windowClosing

        public void windowClosing​(java.awt.event.WindowEvent event)
        Disposes of error dialog, then frame. Sets cancelled to true.
        Specified by:
        windowClosing in interface java.awt.event.WindowListener
        Overrides:
        windowClosing in class JDialogBase
        Parameters:
        event - DOCUMENT ME!

      • init

        private void init()
        Initializes GUI components and displays dialog.

      • setVariables

        private boolean setVariables()
        Use the GUI results to set up the variables needed to run the algorithm.
        Returns:
        true if parameters set successfully, false otherwise.

      • getResultImage

        public ModelImage[] getResultImage()
        Accessor that returns the image.
        Returns:
        The result image.

      • doPostAlgorithmActions

        protected void doPostAlgorithmActions()
        Store the result image in the script runner's image table now that the action execution is finished.
        Overrides:
        doPostAlgorithmActions in class JDialogScriptableBase

      • createInputParameters

        public ParameterTable createInputParameters()
        Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
        Specified by:
        createInputParameters in interface ActionDiscovery
        Returns:
        A parameter table listing the inputs of this algorithm.

      • createOutputParameters

        public ParameterTable createOutputParameters()
        Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
        Specified by:
        createOutputParameters in interface ActionDiscovery
        Returns:
        A parameter table listing the outputs of this algorithm.

      • getOutputImageName

        public java.lang.String getOutputImageName​(java.lang.String imageParamName)
        Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
        Specified by:
        getOutputImageName in interface ActionDiscovery
        Parameters:
        imageParamName - The output image parameter label for which to get the image name.
        Returns:
        The image name of the requested output image parameter label.

      • isActionComplete

        public boolean isActionComplete()
        Returns whether the action has successfully completed its execution.
        Specified by:
        isActionComplete in interface ActionDiscovery
        Returns:
        True, if the action is complete. False, if the action failed or is still running.

      • getActionMetadata

        public ActionMetadata getActionMetadata()
        Return meta-information about this discoverable action for categorization and labeling purposes.
        Specified by:
        getActionMetadata in interface ActionDiscovery
        Returns:
        Metadata for this action.