Package gov.nih.mipav.view.dialogs
Class JDialogReplaceBlankSlicesWithAverages
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogReplaceBlankSlicesWithAverages
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- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,ActionDiscovery,java.awt.event.ActionListener,java.awt.event.FocusListener,java.awt.event.ItemListener,java.awt.event.WindowListener,java.awt.image.ImageObserver,java.awt.MenuContainer,java.io.Serializable,java.util.EventListener,javax.accessibility.Accessible,javax.swing.RootPaneContainer,javax.swing.WindowConstants
public class JDialogReplaceBlankSlicesWithAverages extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery
Dialog to replace the blank slices in 3D images with averages. This dialog will not be visible because it does not require user input at this time. It was made a dialog object because it may in the future require user input and to be consistent with the dialog/algorithm paradigm. In should be noted, that the algorithms are executed in their own thread.** replaces image- Version:
- 1.0 June 5, 2006
- Author:
- William Gandler
- See Also:
- Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private ModelImageimageDOCUMENT ME!private AlgorithmReplaceBlankSlicesWithAveragesrAlgoDOCUMENT ME!private java.lang.String[]titlesDOCUMENT ME!private ViewUserInterfaceuserInterfaceDOCUMENT ME!-
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogReplaceBlankSlicesWithAverages()Empty constructor needed for dynamic instantiation (used during scripting).JDialogReplaceBlankSlicesWithAverages(java.awt.Frame theParentFrame, ModelImage im)Sets the appropriate variables.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.voidcallAlgorithm()Calls the algorithm.ParameterTablecreateInputParameters()Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).ParameterTablecreateOutputParameters()Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).ActionMetadatagetActionMetadata()Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.StringgetOutputImageName(java.lang.String imageParamName)Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).booleanisActionComplete()Returns whether the action has successfully completed its execution.protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.-
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
doPostAlgorithmActions, getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
actionPerformed, buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRun
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Field Detail
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rAlgo
private AlgorithmReplaceBlankSlicesWithAverages rAlgo
DOCUMENT ME!
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image
private ModelImage image
DOCUMENT ME!
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titles
private java.lang.String[] titles
DOCUMENT ME!
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userInterface
private ViewUserInterface userInterface
DOCUMENT ME!
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Constructor Detail
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JDialogReplaceBlankSlicesWithAverages
public JDialogReplaceBlankSlicesWithAverages()
Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogReplaceBlankSlicesWithAverages
public JDialogReplaceBlankSlicesWithAverages(java.awt.Frame theParentFrame, ModelImage im)Sets the appropriate variables. Does not actually create a dialog that is visible because no user input is necessary at present.- Parameters:
theParentFrame- Parent frame.im- Source image.
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Method Detail
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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callAlgorithm
public void callAlgorithm()
Calls the algorithm.- Specified by:
callAlgorithmin classJDialogScriptableBase
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storeParamsFromGUI
protected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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setGUIFromParams
protected void setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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getActionMetadata
public ActionMetadata getActionMetadata()
Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
getActionMetadatain interfaceActionDiscovery- Returns:
- Metadata for this action.
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createInputParameters
public ParameterTable createInputParameters()
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
createInputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
public ParameterTable createOutputParameters()
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
createOutputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the outputs of this algorithm.
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getOutputImageName
public java.lang.String getOutputImageName(java.lang.String imageParamName)
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
getOutputImageNamein interfaceActionDiscovery- Parameters:
imageParamName- The output image parameter label for which to get the image name.- Returns:
- The image name of the requested output image parameter label.
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isActionComplete
public boolean isActionComplete()
Returns whether the action has successfully completed its execution.- Specified by:
isActionCompletein interfaceActionDiscovery- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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