Package gov.nih.mipav.model.file

Class FileInfoOME.OME

java.lang.Object

gov.nih.mipav.model.file.FileInfoOME.OME

Enclosing class:

FileInfoOME

public class FileInfoOME.OME
extends Object

DOCUMENT ME!

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
class	FileInfoOME.OME.Dataset	DOCUMENT ME!
class	FileInfoOME.OME.Experiment	DOCUMENT ME!
class	FileInfoOME.OME.Experimenter	DOCUMENT ME!
class	FileInfoOME.OME.Group	DOCUMENT ME!
class	FileInfoOME.OME.GroupRef	DOCUMENT ME!
class	FileInfoOME.OME.Image	DOCUMENT ME!
class	FileInfoOME.OME.Include	DOCUMENT ME!
class	FileInfoOME.OME.Instrument	DOCUMENT ME!
class	FileInfoOME.OME.Plate	DOCUMENT ME!
class	FileInfoOME.OME.Project	DOCUMENT ME!
class	FileInfoOME.OME.Screen	DOCUMENT ME!

Field Summary

Fields

Modifier and Type	Field	Description
private Vector<FileInfoOME.OME.Dataset>	datasets
private Vector<FileInfoOME.OME.Include>	documentGroup	DOCUMENT ME!
private Vector<FileInfoOME.OME.Experimenter>	experimenters	DOCUMENT ME!
private Vector<FileInfoOME.OME.Experiment>	experiments	DOCUMENT ME!
private Vector<FileInfoOME.OME.Group>	groups	DOCUMENT ME!
private Vector<FileInfoOME.OME.Image>	images	DOCUMENT ME!
private Vector<FileInfoOME.OME.Instrument>	instruments	DOCUMENT ME!
private Vector<FileInfoOME.OME.Plate>	plates	DOCUMENT ME!
private Vector<FileInfoOME.OME.Project>	projects	DOCUMENT ME!
private Vector<FileInfoOME.OME.Screen>	screens	DOCUMENT ME!

Constructor Summary

Constructors

Constructor	Description
OME()

Method Summary

Modifier and Type	Method	Description
void	addDataset(String name, Integer id, Boolean locked)	DOCUMENT ME!
void	addExperiment(Integer id)	DOCUMENT ME!
void	addExperimenter(Integer id)	DOCUMENT ME!
void	addGroup(String name, Integer id)	DOCUMENT ME!
void	addImage(String guid, String type, String name, Integer sizeX, Integer sizeY, Integer sizeZ, Integer numChannels, Integer numTimes, Float pSizeX, Float pSizeY, Float pSizeZ, Float timeInc, Integer waveS, Integer waveInc)	DOCUMENT ME!
void	addInclude(Integer id, URI href, String sha1)	need these functions to create the classes within..
void	addInstrument(Integer id)	DOCUMENT ME!
void	addPlate(Integer id, String name, String ref)	DOCUMENT ME!
void	addProject(String name, Integer id)	DOCUMENT ME!
void	addScreen(Integer id, String name, String ref)	DOCUMENT ME!
FileInfoOME.OME.Dataset	getCurrentDataset()	DOCUMENT ME!
FileInfoOME.OME.Experiment	getCurrentExperiment()	DOCUMENT ME!
FileInfoOME.OME.Experimenter	getCurrentExperimenter()	DOCUMENT ME!
FileInfoOME.OME.Group	getCurrentGroup()	DOCUMENT ME!
FileInfoOME.OME.Image	getCurrentImage()	DOCUMENT ME!
FileInfoOME.OME.Include	getCurrentInclude()	DOCUMENT ME!
FileInfoOME.OME.Instrument	getCurrentInstrument()	DOCUMENT ME!
FileInfoOME.OME.Plate	getCurrentPlate()	DOCUMENT ME!
FileInfoOME.OME.Project	getCurrentProject()	DOCUMENT ME!
FileInfoOME.OME.Screen	getCurrentScreen()	DOCUMENT ME!

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

datasets

private Vector<FileInfoOME.OME.Dataset> datasets

documentGroup

private Vector<FileInfoOME.OME.Include> documentGroup

DOCUMENT ME!

experimenters

private Vector<FileInfoOME.OME.Experimenter> experimenters

DOCUMENT ME!

experiments

private Vector<FileInfoOME.OME.Experiment> experiments

DOCUMENT ME!

groups

private Vector<FileInfoOME.OME.Group> groups

DOCUMENT ME!

images

private Vector<FileInfoOME.OME.Image> images

DOCUMENT ME!

instruments

private Vector<FileInfoOME.OME.Instrument> instruments

DOCUMENT ME!

plates

private Vector<FileInfoOME.OME.Plate> plates

DOCUMENT ME!

projects

private Vector<FileInfoOME.OME.Project> projects

DOCUMENT ME!

screens

private Vector<FileInfoOME.OME.Screen> screens

DOCUMENT ME!

Constructor Details

OME

public OME()

Method Details

addDataset

public void addDataset(String name,
 Integer id,
 Boolean locked)

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Parameters:

name - DOCUMENT ME!

id - DOCUMENT ME!

locked - DOCUMENT ME!

addExperiment

public void addExperiment(Integer id)

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Parameters:

id - DOCUMENT ME!

addExperimenter

public void addExperimenter(Integer id)

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Parameters:

id - DOCUMENT ME!

addGroup

public void addGroup(String name,
 Integer id)

DOCUMENT ME!

Parameters:

name - DOCUMENT ME!

id - DOCUMENT ME!

addImage

public void addImage(String guid,
 String type,
 String name,
 Integer sizeX,
 Integer sizeY,
 Integer sizeZ,
 Integer numChannels,
 Integer numTimes,
 Float pSizeX,
 Float pSizeY,
 Float pSizeZ,
 Float timeInc,
 Integer waveS,
 Integer waveInc)

DOCUMENT ME!

Parameters:

guid - DOCUMENT ME!

type - DOCUMENT ME!

name - DOCUMENT ME!

sizeX - DOCUMENT ME!

sizeY - DOCUMENT ME!

sizeZ - DOCUMENT ME!

numChannels - DOCUMENT ME!

numTimes - DOCUMENT ME!

pSizeX - DOCUMENT ME!

pSizeY - DOCUMENT ME!

pSizeZ - DOCUMENT ME!

timeInc - DOCUMENT ME!

waveS - DOCUMENT ME!

waveInc - DOCUMENT ME!

addInclude

public void addInclude(Integer id,
 URI href,
 String sha1)

need these functions to create the classes within..

Parameters:

id - DOCUMENT ME!

href - DOCUMENT ME!

sha1 - DOCUMENT ME!

addInstrument

public void addInstrument(Integer id)

DOCUMENT ME!

Parameters:

id - DOCUMENT ME!

addPlate

public void addPlate(Integer id,
 String name,
 String ref)

DOCUMENT ME!

Parameters:

id - DOCUMENT ME!

name - DOCUMENT ME!

ref - DOCUMENT ME!

addProject

public void addProject(String name,
 Integer id)

DOCUMENT ME!

Parameters:

name - DOCUMENT ME!

id - DOCUMENT ME!

addScreen

public void addScreen(Integer id,
 String name,
 String ref)

DOCUMENT ME!

Parameters:

id - DOCUMENT ME!

name - DOCUMENT ME!

ref - DOCUMENT ME!

getCurrentDataset

public FileInfoOME.OME.Dataset getCurrentDataset()

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Returns:

DOCUMENT ME!

getCurrentExperiment

public FileInfoOME.OME.Experiment getCurrentExperiment()

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Returns:

DOCUMENT ME!

getCurrentExperimenter

public FileInfoOME.OME.Experimenter getCurrentExperimenter()

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Returns:

DOCUMENT ME!

getCurrentGroup

public FileInfoOME.OME.Group getCurrentGroup()

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Returns:

DOCUMENT ME!

getCurrentImage

public FileInfoOME.OME.Image getCurrentImage()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getCurrentInclude

public FileInfoOME.OME.Include getCurrentInclude()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getCurrentInstrument

public FileInfoOME.OME.Instrument getCurrentInstrument()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getCurrentPlate

public FileInfoOME.OME.Plate getCurrentPlate()

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Returns:

DOCUMENT ME!

getCurrentProject

public FileInfoOME.OME.Project getCurrentProject()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getCurrentScreen

public FileInfoOME.OME.Screen getCurrentScreen()

DOCUMENT ME!

Returns:

DOCUMENT ME!