Package gov.nih.mipav.model.algorithms.utilities

Class AlgorithmRotate

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.utilities.AlgorithmRotate

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener

public class AlgorithmRotate
extends AlgorithmBase

An Algorithm to rotate 3D or 4D dataset 90 or 180 degrees about X, Y, or Z axis. 2D Images can also be rotated. A new rotated image with modified dimensions and resolutions created and can be accessed through returnImage().

Version:

1.0 July 25, 2000

Author:

Harman J. Singh, Matthew J. McAuliffe, Ph.D.

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
private boolean[]	axisFlip
private int[]	axisOrder
(package private) ViewJProgressBar	progressBar
private boolean	quiet
static int	X_AXIS_180	Rotate about the x axis 180 degrees.
static int	X_AXIS_MINUS	Rotate about the x axis -90 degrees (or 270 degrees).
static int	X_AXIS_PLUS	Rotate about the x axis 90 degrees.
static int	Y_AXIS_180	Rotate about the y axis 180 degrees.
static int	Y_AXIS_MINUS	Rotate about the y axis -90 degrees (or 270 degrees).
static int	Y_AXIS_PLUS	Rotate about the y axis 90 degrees.
static int	Z_AXIS_180	Rotate about the z axis 180 degrees.
static int	Z_AXIS_MINUS	Rotate about the z axis -90 degrees (or 270 degrees).
static int	Z_AXIS_PLUS	Rotate about the z axis 90 degrees.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmRotate(ModelImage srcImg, int rotateMode)	Creates new algorithm for rotating.
AlgorithmRotate(ModelImage srcImg, int[] order, boolean[] flip)	Creates new algorithm for rotating.
AlgorithmRotate(ModelImage srcImg, int rotateMode, int progress)	Creates new algorithm for rotating.

Method Summary

Modifier and Type	Method	Description
private void	calcInPlace()	Calculates the rotated image and replaces the source image with the rotated image.
void	finalize()	Prepares this class for destruction.
private void	init(int rotateAxis)
ModelImage	returnImage()	Returns the rotated image.
void	runAlgorithm()	Runs the rotation algorithm.
void	setQuiet(boolean quiet)

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

X_AXIS_180

public static final int X_AXIS_180

Rotate about the x axis 180 degrees.

See Also:

Constant Field Values

X_AXIS_PLUS

public static final int X_AXIS_PLUS

Rotate about the x axis 90 degrees.

See Also:

Constant Field Values

X_AXIS_MINUS

public static final int X_AXIS_MINUS

Rotate about the x axis -90 degrees (or 270 degrees).

See Also:

Constant Field Values

Y_AXIS_180

public static final int Y_AXIS_180

Rotate about the y axis 180 degrees.

See Also:

Constant Field Values

Y_AXIS_PLUS

public static final int Y_AXIS_PLUS

Rotate about the y axis 90 degrees.

See Also:

Constant Field Values

Y_AXIS_MINUS

public static final int Y_AXIS_MINUS

Rotate about the y axis -90 degrees (or 270 degrees).

See Also:

Constant Field Values

Z_AXIS_180

public static final int Z_AXIS_180

Rotate about the z axis 180 degrees.

See Also:

Constant Field Values

Z_AXIS_PLUS

public static final int Z_AXIS_PLUS

Rotate about the z axis 90 degrees.

See Also:

Constant Field Values

Z_AXIS_MINUS

public static final int Z_AXIS_MINUS

Rotate about the z axis -90 degrees (or 270 degrees).

See Also:

Constant Field Values

axisOrder

private int[] axisOrder

axisFlip

private boolean[] axisFlip

progressBar

ViewJProgressBar progressBar

quiet

private boolean quiet

Constructor Detail

AlgorithmRotate

public AlgorithmRotate(ModelImage srcImg,
                       int[] order,
                       boolean[] flip)

Creates new algorithm for rotating. Sets the source image and axis parameter.

Parameters:

srcImg - Source image model.

rotateMode - Rotate about which axis.

AlgorithmRotate

public AlgorithmRotate(ModelImage srcImg,
                       int rotateMode)

Creates new algorithm for rotating. Sets the source image and axis parameter.

Parameters:

srcImg - Source image model.

rotateMode - Rotate about which axis.

AlgorithmRotate

public AlgorithmRotate(ModelImage srcImg,
                       int rotateMode,
                       int progress)

Creates new algorithm for rotating. Sets the source image and axis parameter.

Parameters:

srcImg - Source image model.

rotateMode - Rotate about which axis.

progress - Progress mode (see AlgorithmBase).

Method Detail

finalize

public void finalize()

Prepares this class for destruction.

Overrides:

finalize in class AlgorithmBase

setQuiet

public void setQuiet(boolean quiet)

Parameters:

quiet -

returnImage

public ModelImage returnImage()

Returns the rotated image.

Returns:

The rotated image.

runAlgorithm

public void runAlgorithm()

Runs the rotation algorithm. The algorithm is run in place so automatically replaces the source model image. Resets image orientation, axis orientations, and start locations.

Specified by:

runAlgorithm in class AlgorithmBase

init

private void init(int rotateAxis)

calcInPlace

private void calcInPlace()

Calculates the rotated image and replaces the source image with the rotated image.