java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.utilities.AlgorithmInsertVolume

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmInsertVolume
extends AlgorithmBase
```

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type	Field	Description
`static int`	`ADJACENT_BACK`	Copy adjacent slice.
`static int`	`ADJACENT_NEXT`	Copy adjacent slice.
`static int`	`AVERAGE`	Average slice type - the inserted slice is set equal to the mean of the 2 surrounding slices.
`static int`	`BLANK`	Blank slice type - the inserted slice is blank.
`private float[]`	`imageBuffer2`
`static int`	`INSERTED_IMAGE`	Original slice type - a 2D image is inserted.
`private ModelImage`	`insertedImage`	Image inserted for slice type == ORIGINAL.
`private int`	`insertSlice`	Number of slice before which another slice is inserted.
`private int`	`insertVolumePos`
`private int`	`sliceArea`	Area of a slice (Xdim * Ydim).
`private int`	`Tdim`	Original T dimension of the image.
`private int`	`volumeType`
`static int`	`WEIGHTED_AVERAGE`	Weighted average slice type.
`private float`	`weightPrevious`	For weighted averaging.
`private int`	`Xdim`	X dimension of the image.
`private int`	`Ydim`	Y dimension of the image.
`private int`	`Zdim`	Z dimension of the image.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmInsertVolume(ModelImage srcImage, ModelImage destImage, int volumeType, int insertVolumePos, ModelImage insertedImage)`	Import source and destination images into the class.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type Method Description

void finalize()
Prepares this class for destruction.

void runAlgorithm()
Runs algorithm.
- Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
  actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
- Methods inherited from class java.lang.Thread
  activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield
- Methods inherited from class java.lang.Object
  equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - WEIGHTED_AVERAGE
```
public static final int WEIGHTED_AVERAGE
```
    Weighted average slice type.
    
    See Also:
    
    Constant Field Values
  - AVERAGE
```
public static final int AVERAGE
```
    Average slice type - the inserted slice is set equal to the mean of the 2 surrounding slices.
    
    See Also:
    
    Constant Field Values
  - BLANK
```
public static final int BLANK
```
    Blank slice type - the inserted slice is blank.
    
    See Also:
    
    Constant Field Values
  - INSERTED_IMAGE
```
public static final int INSERTED_IMAGE
```
    Original slice type - a 2D image is inserted.
    
    See Also:
    
    Constant Field Values
  - ADJACENT_BACK
```
public static final int ADJACENT_BACK
```
    Copy adjacent slice.
    
    See Also:
    
    Constant Field Values
  - ADJACENT_NEXT
```
public static final int ADJACENT_NEXT
```
    Copy adjacent slice.
    
    See Also:
    
    Constant Field Values
  - insertedImage
```
private ModelImage insertedImage
```
    Image inserted for slice type == ORIGINAL.
  - insertSlice
```
private int insertSlice
```
    Number of slice before which another slice is inserted.
  - Tdim
```
private int Tdim
```
    Original T dimension of the image.
  - sliceArea
```
private int sliceArea
```
    Area of a slice (Xdim * Ydim).
  - Xdim
```
private int Xdim
```
    X dimension of the image.
  - Ydim
```
private int Ydim
```
    Y dimension of the image.
  - Zdim
```
private int Zdim
```
    Z dimension of the image.
  - volumeType
```
private int volumeType
```
  - insertVolumePos
```
private int insertVolumePos
```
  - weightPrevious
```
private float weightPrevious
```
    For weighted averaging.
  - imageBuffer2
```
private float[] imageBuffer2
```
- Constructor Detail
  - AlgorithmInsertVolume
```
public AlgorithmInsertVolume(ModelImage srcImage,
                             ModelImage destImage,
                             int volumeType,
                             int insertVolumePos,
                             ModelImage insertedImage)
```
    Import source and destination images into the class.
    
    Parameters:
    
    srcImage - source image (image to clip from)
    
    destImage - destination image (image to paste to)
    
    volumeType - WEIGHTED_AVERAGE or AVERAGE or BLANK or ADJACENT_BACK or ADJACENT_NEXT
    
    insertVolumePos - position of volume to be inserted
    
    insertedImage - (image designated by user to be inserted)
- Method Detail
  - finalize
```
public void finalize()
```
    Prepares this class for destruction.
    
    Overrides:
    
    finalize in class AlgorithmBase
  - runAlgorithm
```
public void runAlgorithm()
```
    Runs algorithm.
    
    Specified by:
    
    runAlgorithm in class AlgorithmBase

Modifier and Type	Method	Description
`void`	`finalize()`	Prepares this class for destruction.
`void`	`runAlgorithm()`	Runs algorithm.

Class AlgorithmInsertVolume

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

WEIGHTED_AVERAGE

AVERAGE

BLANK

INSERTED_IMAGE

ADJACENT_BACK

ADJACENT_NEXT

insertedImage

insertSlice

Tdim

sliceArea

Xdim

Ydim

Zdim

volumeType

insertVolumePos

weightPrevious

imageBuffer2

Constructor Detail

AlgorithmInsertVolume

Method Detail

finalize

runAlgorithm