java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.utilities.AlgorithmCropTilted

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmCropTilted
extends AlgorithmBase
```
Algorithm to crop a tilted rectangle

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type	Field	Description
`static int`	`DEGREES`	used for setting rotation
`(package private) int`	`MASK_METHOD`
`(package private) int`	`method`
`static int`	`RADIANS`	used for setting rotation
`private ModelImage`	`resultImage`
`private boolean`	`run2D`
`(package private) int`	`VERTICES_METHOD`
`(package private) int`	`VOI_METHOD`
`private double`	`x1`
`private double`	`x2`
`private double`	`x3`
`private double`	`x4`
`private double`	`x5`
`private double`	`x6`
`private double`	`x7`
`private double`	`x8`
`private double`	`y1`
`private double`	`y2`
`private double`	`y3`
`private double`	`y4`
`private double`	`y5`
`private double`	`y6`
`private double`	`y7`
`private double`	`y8`
`private double`	`z1`
`private double`	`z2`
`private double`	`z3`
`private double`	`z4`
`private double`	`z5`
`private double`	`z6`
`private double`	`z7`
`private double`	`z8`

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmCropTilted(ModelImage srcImage, double x1, double y1, double z1, double x2, double y2, double z2, double x3, double y3, double z3, double x4, double y4, double z4, double x5, double y5, double z5, double x6, double y6, double z6, double x7, double y7, double z7, double x8, double y8, double z8, int method)`	Rotate tilted cuboid to remove tilt and crop cuboid.
`AlgorithmCropTilted(ModelImage srcImage, double x1, double y1, double x2, double y2, double x3, double y3, double x4, double y4, int method)`	Rotate tilted rectangle to remove tilt and crop rectangle.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type Method Description

ModelImage getResultImage()

void runAlgorithm()
Actually runs the algorithm.
- Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
  actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
- Methods inherited from class java.lang.Thread
  activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield
- Methods inherited from class java.lang.Object
  equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

x1
```
private double x1
```

x2
```
private double x2
```

x3
```
private double x3
```

x4
```
private double x4
```

x5
```
private double x5
```

x6
```
private double x6
```

x7
```
private double x7
```

x8
```
private double x8
```

y1
```
private double y1
```

y2
```
private double y2
```

y3
```
private double y3
```

y4
```
private double y4
```

y5
```
private double y5
```

y6
```
private double y6
```

y7
```
private double y7
```

y8
```
private double y8
```

z1
```
private double z1
```

z2
```
private double z2
```

z3
```
private double z3
```

z4
```
private double z4
```

z5
```
private double z5
```

z6
```
private double z6
```

z7
```
private double z7
```

z8
```
private double z8
```

VERTICES_METHOD
```
final int VERTICES_METHOD
```
See Also:

Constant Field Values

VOI_METHOD
```
final int VOI_METHOD
```
See Also:

Constant Field Values

MASK_METHOD
```
final int MASK_METHOD
```
See Also:

Constant Field Values

method
```
int method
```

resultImage
```
private ModelImage resultImage
```

DEGREES
```
public static final int DEGREES
```
used for setting rotation

See Also:

Constant Field Values

RADIANS
```
public static final int RADIANS
```
used for setting rotation

See Also:

Constant Field Values

run2D
```
private boolean run2D
```

Constructor Detail

AlgorithmCropTilted

public AlgorithmCropTilted(ModelImage srcImage,
                           double x1,
                           double y1,
                           double x2,
                           double y2,
                           double x3,
                           double y3,
                           double x4,
                           double y4,
                           int method)

Rotate tilted rectangle to remove tilt and crop rectangle.

Parameters:: srcImage - original image; x1 -; y1 -; x2 -; y2 -; x3 -; y3 -; x4 -; y4 -

AlgorithmCropTilted

public AlgorithmCropTilted(ModelImage srcImage,
                           double x1,
                           double y1,
                           double z1,
                           double x2,
                           double y2,
                           double z2,
                           double x3,
                           double y3,
                           double z3,
                           double x4,
                           double y4,
                           double z4,
                           double x5,
                           double y5,
                           double z5,
                           double x6,
                           double y6,
                           double z6,
                           double x7,
                           double y7,
                           double z7,
                           double x8,
                           double y8,
                           double z8,
                           int method)

Rotate tilted cuboid to remove tilt and crop cuboid.

Parameters:: srcImage - original image; x1 -; y1 -; z1 -; x2 -; y2 -; z2 -; x3 -; y3 -; z3 -; x4 -; y4 -; z4 -; x5 -; y5 -; z5 -; x6 -; y6 -; z6 -; x7 -; y7 -; z7 -; x8 -; y8 -; z8 -

Method Detail
- runAlgorithm
```
public void runAlgorithm()
```
  Description copied from class: AlgorithmBase
  
  Actually runs the algorithm. Implemented by inheriting algorithms.
  
  Specified by:
  
  runAlgorithm in class AlgorithmBase
- getResultImage
```
public ModelImage getResultImage()
```

Modifier and Type	Method	Description
`ModelImage`	`getResultImage()`
`void`	`runAlgorithm()`	Actually runs the algorithm.

Class AlgorithmCropTilted

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

x1

x2

x3

x4

x5

x6

x7

x8

y1

y2

y3

y4

y5

y6

y7

y8

z1

z2

z3

z4

z5

z6

z7

z8

VERTICES_METHOD

VOI_METHOD

MASK_METHOD

method

resultImage

DEGREES

RADIANS

run2D

Constructor Detail

AlgorithmCropTilted

AlgorithmCropTilted

Method Detail

runAlgorithm

getResultImage