Package gov.nih.mipav.model.algorithms.utilities

Class AlgorithmConcatMult

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.utilities.AlgorithmConcatMult

All Implemented Interfaces:

ActionListener, WindowListener, Runnable, EventListener

Direct Known Subclasses:

AlgorithmConcatMult2Dto3D, AlgorithmConcatMult3Dto3D, AlgorithmConcatMult3Dto4D

public abstract class AlgorithmConcatMult
extends AlgorithmBase

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Thread.Builder, Thread.State, Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
protected boolean	copyAllInfo	Whether to copy all file information
protected ModelImage	destImage	final image
protected ModelImage[]	images	array of images
protected int	xDim	x and y dimensions of image
protected int	yDim	x and y dimensions of image

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmConcatMult()

Method Summary

Modifier and Type	Method	Description
protected void	copyBaseInfo(FileInfoBase[] fileInfo, FileInfoBase srcFileInfo, float[] resols, float[] origins, int[] units, int i)
protected void	copyDicomInfo(FileInfoBase[] destFileInfo, FileInfoBase baseDicomInfo, float[] resols, int z, int t, int sliceCounter)	Most efficient way of creating DICOM tags for 4-D.

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, runAlgorithm, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, isVirtual, join, join, join, join, ofPlatform, ofVirtual, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, sleep, start, startVirtualThread, stop, suspend, threadId, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

images

protected ModelImage[] images

array of images

destImage

protected ModelImage destImage

final image

xDim

protected int xDim

x and y dimensions of image

yDim

protected int yDim

x and y dimensions of image

copyAllInfo

protected boolean copyAllInfo

Whether to copy all file information

Constructor Details

AlgorithmConcatMult

public AlgorithmConcatMult()

Method Details

copyBaseInfo

protected void copyBaseInfo(FileInfoBase[] fileInfo,
 FileInfoBase srcFileInfo,
 float[] resols,
 float[] origins,
 int[] units,
 int i)

copyDicomInfo

protected void copyDicomInfo(FileInfoBase[] destFileInfo,
 FileInfoBase baseDicomInfo,
 float[] resols,
 int z,
 int t,
 int sliceCounter)

Most efficient way of creating DICOM tags for 4-D. Uses pointers based on srcimage dicom tags

Parameters:

destFileInfo -

resols -

z -

t -

sliceCounter -

j -