Package gov.nih.mipav.model.algorithms.utilities

Class AlgorithmComplexToReal

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.utilities.AlgorithmComplexToReal

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener

public class AlgorithmComplexToReal
extends AlgorithmBase

Simple algorithm that converts an RGB image to a single greyscale image.

User can specify red, green, and blue scaling factors Default is equal weighting new gray value = ( R + G + B) / 3 if no threshold averaging; if thresholdAverage is true, only average values above trheshold

The standard for computer graphics is > Y = 0.299*R + 0.587*G + 0.114*B > > That assumes both Y and RGB are in the range 0:255 > > BT.601 calls for Y to be limited to 16:235, if you want > that multiply the constants by 219/255 and add 16 to Y.

Yes, but Y is not pure luminance, the other components it might be PbPr, CbCr carry color information that affect perceived brightness.

Author:

Justin Senseney

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
private float	blueValue	Weighting values for the red, green, and blue channels.
private float	greenValue	Weighting values for the red, green, and blue channels.
private boolean	intensityAverage	If true indicates that the result image is an average of the three channels.
private float	redValue	Weighting values for the red, green, and blue channels.
private float	thirdValue	This value equal one third (0.3333333).
private float	threshold	Only average values above threshold.
private boolean	thresholdAverage	If true only average values above threshold.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmComplexToReal(ModelImage srcImg)	Creates a new AlgorithmComplexToReal object.
AlgorithmComplexToReal(ModelImage srcImg, float redValue, float greenValue, float blueValue, boolean thresholdAverage, float threshold, boolean intensityAverage)	Creates a new AlgorithmComplexToReal object.
AlgorithmComplexToReal(ModelImage destImg, ModelImage srcImg)	Creates a new AlgorithmComplexToReal object.
AlgorithmComplexToReal(ModelImage destImg, ModelImage srcImg, float redValue, float greenValue, float blueValue, boolean thresholdAverage, float threshold, boolean intensityAverage)	Creates a new AlgorithmComplexToReal object.

Method Summary

Modifier and Type	Method	Description
private void	calcStoreInDest()	Calculates the gray scale image.
private void	calcStoreInPlace()	Calculates the gray scale image.
void	finalize()	Prepares this class for destruction.
ModelImage	getSrcImage()	DOCUMENT ME!
void	runAlgorithm()	Starts the program.

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

intensityAverage

private boolean intensityAverage

If true indicates that the result image is an average of the three channels. Default is false

redValue

private float redValue

Weighting values for the red, green, and blue channels. Default all channels = 0.33333

greenValue

private float greenValue

Weighting values for the red, green, and blue channels. Default all channels = 0.33333

blueValue

private float blueValue

Weighting values for the red, green, and blue channels. Default all channels = 0.33333

thirdValue

private float thirdValue

This value equal one third (0.3333333).

threshold

private float threshold

Only average values above threshold.

thresholdAverage

private boolean thresholdAverage

If true only average values above threshold.

Constructor Detail

AlgorithmComplexToReal

public AlgorithmComplexToReal(ModelImage srcImg)

Creates a new AlgorithmComplexToReal object.

Parameters:

srcImg - source image model

AlgorithmComplexToReal

public AlgorithmComplexToReal(ModelImage destImg,
                              ModelImage srcImg)

Creates a new AlgorithmComplexToReal object.

Parameters:

destImg - image model where result image is to stored

srcImg - source image model

AlgorithmComplexToReal

public AlgorithmComplexToReal(ModelImage srcImg,
                              float redValue,
                              float greenValue,
                              float blueValue,
                              boolean thresholdAverage,
                              float threshold,
                              boolean intensityAverage)

Creates a new AlgorithmComplexToReal object.

Parameters:

srcImg - source image model

redValue - weighting of the red channel

greenValue - weighting of the green channel

blueValue - weighting of the blue channel

thresholdAverage - if true only average values above threshold

threshold - DOCUMENT ME!

intensityAverage - DOCUMENT ME!

AlgorithmComplexToReal

public AlgorithmComplexToReal(ModelImage destImg,
                              ModelImage srcImg,
                              float redValue,
                              float greenValue,
                              float blueValue,
                              boolean thresholdAverage,
                              float threshold,
                              boolean intensityAverage)

Creates a new AlgorithmComplexToReal object.

Parameters:

destImg - image model where result image is to stored

srcImg - source image model

redValue - weighting of the red channel

greenValue - weighting of the green channel

blueValue - weighting of the blue channel

thresholdAverage - if true only average values above threshold

threshold - DOCUMENT ME!

intensityAverage - DOCUMENT ME!

Method Detail

finalize

public void finalize()

Prepares this class for destruction.

Overrides:

finalize in class AlgorithmBase

getSrcImage

public ModelImage getSrcImage()

DOCUMENT ME!

Overrides:

getSrcImage in class AlgorithmBase

Returns:

DOCUMENT ME!

runAlgorithm

public void runAlgorithm()

Starts the program.

Specified by:

runAlgorithm in class AlgorithmBase

calcStoreInDest

private void calcStoreInDest()

Calculates the gray scale image.

calcStoreInPlace

private void calcStoreInPlace()

Calculates the gray scale image. Must use getSrcImage() after running this routine