Package gov.nih.mipav.model.algorithms.registration.vabra

Class VabraVolumeCollection

java.lang.Object

gov.nih.mipav.model.algorithms.registration.vabra.VabraVolumeCollection

All Implemented Interfaces:

Cloneable

public class VabraVolumeCollection
extends Object
implements Cloneable

Field Summary

Fields

Modifier and Type	Field	Description
private int	chInterpType
float[]	data
protected double	intervalsD
protected double	maxValsD
protected double	minValsD
int	numOfBins
int	XN
int	YN
int	ZN

Constructor Summary

Constructors

Constructor	Description
VabraVolumeCollection(int XN, int YN, int ZN, int interpType, int numOfBins)
VabraVolumeCollection(ModelImage vol, int interpType, int numOfBins, boolean bMinMax)

Method Summary

Modifier and Type	Method	Description
int	calculateBin(double val)
void	calculateMaxAndMinVals()
VabraVolumeCollection	clone()
void	disposeLocal()
void	downSample(int newSizeX, int newSizeY, int newSizeZ, double sigma)
double	getIntervals()
double	getMax()
double	getMin()
int	getXN()
int	getYN()
int	getZN()
double	interpolate(double x, double y, double z)
void	rescaleToBins()
VabraVolumeCollection	returnDeformedCopy(float[] defField)
void	setMinMax(double maxValsDOld, double minValsDOld, double intervalsDOld)

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

data

public float[] data

XN

public int XN

YN

public int YN

ZN

public int ZN

numOfBins

public int numOfBins

chInterpType

private int chInterpType

maxValsD

protected double maxValsD

minValsD

protected double minValsD

intervalsD

protected double intervalsD

Constructor Details

VabraVolumeCollection

public VabraVolumeCollection(ModelImage vol,
 int interpType,
 int numOfBins,
 boolean bMinMax)

VabraVolumeCollection

public VabraVolumeCollection(int XN,
 int YN,
 int ZN,
 int interpType,
 int numOfBins)

Method Details

disposeLocal

public void disposeLocal()

downSample

public void downSample(int newSizeX,
 int newSizeY,
 int newSizeZ,
 double sigma)

interpolate

public double interpolate(double x,
 double y,
 double z)

calculateBin

public int calculateBin(double val)

rescaleToBins

public void rescaleToBins()

clone

public VabraVolumeCollection clone()

Overrides:

clone in class Object

returnDeformedCopy

public VabraVolumeCollection returnDeformedCopy(float[] defField)

calculateMaxAndMinVals

public void calculateMaxAndMinVals()

getXN

public int getXN()

getYN

public int getYN()

getZN

public int getZN()

getMax

public double getMax()

getMin

public double getMin()

getIntervals

public double getIntervals()

setMinMax

public void setMinMax(double maxValsDOld,
 double minValsDOld,
 double intervalsDOld)