java.lang.Object
- gov.nih.mipav.model.algorithms.registration.vabra.VabraVolumeCollection

All Implemented Interfaces:: java.lang.Cloneable

public class VabraVolumeCollection
extends java.lang.Object
implements java.lang.Cloneable

Field Summary

Fields
Modifier and Type	Field	Description
`private int`	`chInterpType`
`float[]`	`data`
`protected double`	`intervalsD`
`protected double`	`maxValsD`
`protected double`	`minValsD`
`int`	`numOfBins`
`int`	`XN`
`int`	`YN`
`int`	`ZN`

Constructor Summary

Constructors
Constructor	Description
`VabraVolumeCollection(int XN, int YN, int ZN, int interpType, int numOfBins)`
`VabraVolumeCollection(ModelImage vol, int interpType, int numOfBins, boolean bMinMax)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`int`	`calculateBin(double val)`
`void`	`calculateMaxAndMinVals()`
`VabraVolumeCollection`	`clone()`
`void`	`disposeLocal()`
`void`	`downSample(int newSizeX, int newSizeY, int newSizeZ, double sigma)`
`double`	`getIntervals()`
`double`	`getMax()`
`double`	`getMin()`
`int`	`getXN()`
`int`	`getYN()`
`int`	`getZN()`
`double`	`interpolate(double x, double y, double z)`
`void`	`rescaleToBins()`
`VabraVolumeCollection`	`returnDeformedCopy(float[] defField)`
`void`	`setMinMax(double maxValsDOld, double minValsDOld, double intervalsDOld)`

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

data
```
public float[] data
```

XN
```
public int XN
```

YN
```
public int YN
```

ZN
```
public int ZN
```

numOfBins
```
public int numOfBins
```

chInterpType
```
private int chInterpType
```

maxValsD
```
protected double maxValsD
```

minValsD
```
protected double minValsD
```

intervalsD
```
protected double intervalsD
```

Constructor Detail

VabraVolumeCollection

public VabraVolumeCollection(ModelImage vol,
                             int interpType,
                             int numOfBins,
                             boolean bMinMax)

VabraVolumeCollection

public VabraVolumeCollection(int XN,
                             int YN,
                             int ZN,
                             int interpType,
                             int numOfBins)

Method Detail

disposeLocal
```
public void disposeLocal()
```

downSample

public void downSample(int newSizeX,
                       int newSizeY,
                       int newSizeZ,
                       double sigma)

interpolate

public double interpolate(double x,
                          double y,
                          double z)

calculateBin

public int calculateBin(double val)

rescaleToBins
```
public void rescaleToBins()
```

clone
```
public VabraVolumeCollection clone()
```
Overrides:

clone in class java.lang.Object

returnDeformedCopy

public VabraVolumeCollection returnDeformedCopy(float[] defField)

calculateMaxAndMinVals
```
public void calculateMaxAndMinVals()
```

getXN
```
public int getXN()
```

getYN
```
public int getYN()
```

getZN
```
public int getZN()
```

getMax
```
public double getMax()
```

getMin
```
public double getMin()
```

getIntervals
```
public double getIntervals()
```

setMinMax

public void setMinMax(double maxValsDOld,
                      double minValsDOld,
                      double intervalsDOld)

Class VabraVolumeCollection

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

data

XN

YN

ZN

numOfBins

chInterpType

maxValsD

minValsD

intervalsD

Constructor Detail

VabraVolumeCollection

VabraVolumeCollection

Method Detail

disposeLocal

downSample

interpolate

calculateBin

rescaleToBins

clone

returnDeformedCopy

calculateMaxAndMinVals

getXN

getYN

getZN

getMax

getMin

getIntervals

setMinMax