java.lang.Object
- gov.nih.mipav.model.algorithms.StochasticForests.Data
- - gov.nih.mipav.model.algorithms.StochasticForests.DataSparse

Enclosing class:: StochasticForests

private class StochasticForests.DataSparse
extends StochasticForests.Data

Field Summary

Fields
Modifier and Type Field Description

private StochasticForests.SparseMatrix data
- Fields inherited from class gov.nih.mipav.model.algorithms.StochasticForests.Data
  externalData, i, index_data, is_ordered_variable, max_num_unique_values, no_split_variables, num_cols, num_cols_no_snp, num_rows, num_rows_rounded, permuted_sampleIDs, snp_data, unique_data_values, variable_names

Constructor Summary

Constructors
Constructor	Description
`DataSparse()`
`DataSparse(StochasticForests.SparseMatrix data, java.util.Vector<java.lang.String> variable_names, int num_rows, int num_cols)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`dispose()`
`double`	`get(int row, int col)`
`void`	`reserveMemory()`
`void`	`set(int col, int row, double value, boolean[] error)`

Methods inherited from class gov.nih.mipav.model.algorithms.StochasticForests.Data
addNoSplitVariable, addSnpData, getAllValues, getIndex, getIsOrderedVariable, getMaxNumUniqueValues, getMinMaxValues, getNoSplitVariables, getNumCols, getNumRows, getNumUniqueDataValues, getPermutedSampleID, getUniqueDataValue, getUnpermutedVarID, getVariableID, getVariableNames, isOrderedVariable, loadFromFile, loadFromFileOther, permuteSampleIDs, setIsOrderedVariable, setIsOrderedVariableString, sort

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

data

private StochasticForests.SparseMatrix data

Constructor Detail

DataSparse
```
public DataSparse()
```

DataSparse

public DataSparse(StochasticForests.SparseMatrix data,
                  java.util.Vector<java.lang.String> variable_names,
                  int num_rows,
                  int num_cols)

Method Detail
- dispose
```
public void dispose()
```
  Overrides:
  
  dispose in class StochasticForests.Data
- get
```
public double get(int row,
                  int col)
```
  Specified by:
  
  get in class StochasticForests.Data
- reserveMemory
```
public void reserveMemory()
```
  Specified by:
  
  reserveMemory in class StochasticForests.Data
- set
```
public void set(int col,
                int row,
                double value,
                boolean[] error)
```
  Specified by:
  
  set in class StochasticForests.Data

Class StochasticForests.DataSparse

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.StochasticForests.Data

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.StochasticForests.Data

Methods inherited from class java.lang.Object

Field Detail

data

Constructor Detail

DataSparse

DataSparse

Method Detail

dispose

get

reserveMemory

set