Package gov.nih.mipav.model.algorithms

Class NelderMead

java.lang.Object

gov.nih.mipav.model.algorithms.NelderMead

public abstract class NelderMead
extends java.lang.Object

Nelder-Mead original code copyright 2017 by Matteo Maggioni under the MIT Licence. Ported from C to Java by William Gandler

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
private class	NelderMead.param_t
class	NelderMead.point_t
private class	NelderMead.pointComparator
private class	NelderMead.simplex_t

Field Summary

Fields

Modifier and Type	Field	Description
private int	ackleyNum
private double	CHI
private int	costNum
private double	GAMMA
private int	max_eval
private int	max_iter
private int	n
private NelderMead.param_t	params
private double	RHO
private boolean	self_test
private double	SIGMA
private NelderMead.point_t	solution
private double	tolf
private double	tolx
private boolean	verbose
private double[]	x

Constructor Summary

Constructors

Constructor	Description
NelderMead(int n, double[] x, double tolx, double tolf, int max_iter, int max_eval, boolean verbose)

Method Summary

Modifier and Type	Method	Description
private boolean	continue_minimization(NelderMead.simplex_t simplex, int eval_count, int iter_count)
private void	copy_point(int n, NelderMead.point_t src, NelderMead.point_t dst)
private void	cost_fun(int n, NelderMead.point_t point, NelderMead.param_t params)
abstract void	cost_function(int n, NelderMead.point_t point)
void	driver()
private void	get_centroid(NelderMead.simplex_t simplex, NelderMead.point_t centroid)
double	getSolValue()
double[]	getSolX()
private void	nelder_mead(NelderMead.point_t start, NelderMead.point_t solution)
private void	simplex_sort(NelderMead.simplex_t simplex)
private double	SQUARE(double x)
private void	swap_points(int n, NelderMead.point_t p1, NelderMead.point_t p2)
private void	update_point(NelderMead.simplex_t simplex, NelderMead.point_t centroid, double lambda, NelderMead.point_t point)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

RHO

private double RHO

CHI

private double CHI

GAMMA

private double GAMMA

SIGMA

private double SIGMA

n

private int n

x

private double[] x

tolx

private double tolx

tolf

private double tolf

max_iter

private int max_iter

max_eval

private int max_eval

verbose

private boolean verbose

self_test

private boolean self_test

ackleyNum

private final int ackleyNum

See Also:

Constant Field Values

costNum

private int costNum

params

private NelderMead.param_t params

solution

private NelderMead.point_t solution

Constructor Detail

NelderMead

public NelderMead(int n,
                  double[] x,
                  double tolx,
                  double tolf,
                  int max_iter,
                  int max_eval,
                  boolean verbose)

Method Detail

driver

public void driver()

getSolX

public double[] getSolX()

getSolValue

public double getSolValue()

nelder_mead

private void nelder_mead(NelderMead.point_t start,
                         NelderMead.point_t solution)

simplex_sort

private void simplex_sort(NelderMead.simplex_t simplex)

get_centroid

private void get_centroid(NelderMead.simplex_t simplex,
                          NelderMead.point_t centroid)

continue_minimization

private boolean continue_minimization(NelderMead.simplex_t simplex,
                                      int eval_count,
                                      int iter_count)

update_point

private void update_point(NelderMead.simplex_t simplex,
                          NelderMead.point_t centroid,
                          double lambda,
                          NelderMead.point_t point)

copy_point

private void copy_point(int n,
                        NelderMead.point_t src,
                        NelderMead.point_t dst)

swap_points

private void swap_points(int n,
                         NelderMead.point_t p1,
                         NelderMead.point_t p2)

SQUARE

private double SQUARE(double x)

cost_fun

private void cost_fun(int n,
                      NelderMead.point_t point,
                      NelderMead.param_t params)

cost_function

public abstract void cost_function(int n,
                                   NelderMead.point_t point)