java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.AlgorithmVOILogicalOperations

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmVOILogicalOperations
extends AlgorithmBase
```
Algorithm class for performing logical operations on VOIs

Author:

pandyan

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type	Field	Description
`static int`	`ADD`	operation constants
`private AlgorithmMorphology2D`	`alg2D`
`private AlgorithmMorphology3D`	`alg3D`
`protected ModelImage`	`clonedImage`	Model Images
`protected boolean`	`doVoiImage`	flag indicating whether output should be VOI image or mask image
`protected ModelImage`	`finalMaskImage`	Model Images
`private int`	`kernel`
`private int`	`max`
`private int`	`min`
`protected int`	`operation`	operation type
`static int`	`OR`	operation constants
`protected ViewVOIVector`	`selectedVOIset`	Vector of all VOIs that will have calculations performed.
`protected ModelImage`	`tempMaskImage`	Model Images
`static int`	`XOR`	operation constants

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmVOILogicalOperations(ModelImage clonedImage, ViewVOIVector selectedVOIset, int operation, boolean doVoiImage)`	constructor

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type Method Description

ModelImage getFinalMaskImage()
returns the mask image

void runAlgorithm()
run algorithm
- Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
  actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
- Methods inherited from class java.lang.Thread
  activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield
- Methods inherited from class java.lang.Object
  equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail
- selectedVOIset
```
protected ViewVOIVector selectedVOIset
```
  Vector of all VOIs that will have calculations performed.
- clonedImage
```
protected ModelImage clonedImage
```
  Model Images
- finalMaskImage
```
protected ModelImage finalMaskImage
```
  Model Images
- tempMaskImage
```
protected ModelImage tempMaskImage
```
  Model Images
- operation
```
protected int operation
```
  operation type
- ADD
```
public static final int ADD
```
  operation constants
  
  See Also:
  
  Constant Field Values
- OR
```
public static final int OR
```
  operation constants
  
  See Also:
  
  Constant Field Values
- XOR
```
public static final int XOR
```
  operation constants
  
  See Also:
  
  Constant Field Values
- doVoiImage
```
protected boolean doVoiImage
```
  flag indicating whether output should be VOI image or mask image
- alg2D
```
private AlgorithmMorphology2D alg2D
```
- alg3D
```
private AlgorithmMorphology3D alg3D
```
- min
```
private int min
```
- max
```
private int max
```
- kernel
```
private int kernel
```

Constructor Detail

AlgorithmVOILogicalOperations

public AlgorithmVOILogicalOperations(ModelImage clonedImage,
                                     ViewVOIVector selectedVOIset,
                                     int operation,
                                     boolean doVoiImage)

constructor

Parameters:: img -; clonedImage -; selectedVOIset -; operation -; doVoiImage -

Method Detail
- runAlgorithm
```
public void runAlgorithm()
```
  run algorithm
  
  Specified by:
  
  runAlgorithm in class AlgorithmBase
- getFinalMaskImage
```
public ModelImage getFinalMaskImage()
```
  returns the mask image
  
  Returns:

Modifier and Type	Method	Description
`ModelImage`	`getFinalMaskImage()`	returns the mask image
`void`	`runAlgorithm()`	run algorithm

Class AlgorithmVOILogicalOperations

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

selectedVOIset

clonedImage

finalMaskImage

tempMaskImage

operation

ADD

OR

XOR

doVoiImage

alg2D

alg3D

min

max

kernel

Constructor Detail

AlgorithmVOILogicalOperations

Method Detail

runAlgorithm

getFinalMaskImage