Package gov.nih.mipav.model.algorithms

Class AlgorithmVOILogicalOperations

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.AlgorithmVOILogicalOperations

All Implemented Interfaces:

ActionListener, WindowListener, Runnable, EventListener

public class AlgorithmVOILogicalOperations
extends AlgorithmBase

Algorithm class for performing logical operations on VOIs

Author:

pandyan

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Thread.Builder, Thread.State, Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
static final int	ADD	operation constants
private AlgorithmMorphology2D	alg2D
private AlgorithmMorphology3D	alg3D
protected ModelImage	clonedImage	Model Images
protected boolean	doVoiImage	flag indicating whether output should be VOI image or mask image
protected ModelImage	finalMaskImage	Model Images
private int	kernel
private int	max
private int	min
protected int	operation	operation type
static final int	OR	operation constants
protected ViewVOIVector	selectedVOIset	Vector of all VOIs that will have calculations performed.
protected ModelImage	tempMaskImage	Model Images
static final int	XOR	operation constants

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmVOILogicalOperations(ModelImage clonedImage, ViewVOIVector selectedVOIset, int operation, boolean doVoiImage)	constructor

Method Summary

Modifier and Type	Method	Description
ModelImage	getFinalMaskImage()	returns the mask image
void	runAlgorithm()	run algorithm

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, isVirtual, join, join, join, join, ofPlatform, ofVirtual, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, sleep, start, startVirtualThread, stop, suspend, threadId, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

selectedVOIset

protected ViewVOIVector selectedVOIset

Vector of all VOIs that will have calculations performed.

clonedImage

protected ModelImage clonedImage

Model Images

finalMaskImage

protected ModelImage finalMaskImage

Model Images

tempMaskImage

protected ModelImage tempMaskImage

Model Images

operation

protected int operation

operation type

ADD

public static final int ADD

operation constants

See Also:

• Constant Field Values

OR

public static final int OR

operation constants

See Also:

• Constant Field Values

XOR

public static final int XOR

operation constants

See Also:

• Constant Field Values

doVoiImage

protected boolean doVoiImage

flag indicating whether output should be VOI image or mask image

alg2D

private AlgorithmMorphology2D alg2D

alg3D

private AlgorithmMorphology3D alg3D

min

private int min

max

private int max

kernel

private int kernel

Constructor Details

AlgorithmVOILogicalOperations

public AlgorithmVOILogicalOperations(ModelImage clonedImage,
 ViewVOIVector selectedVOIset,
 int operation,
 boolean doVoiImage)

constructor

Parameters:

clonedImage -

selectedVOIset -

operation -

doVoiImage -

img -

Method Details

runAlgorithm

public void runAlgorithm()

run algorithm

Specified by:

runAlgorithm in class AlgorithmBase

getFinalMaskImage

public ModelImage getFinalMaskImage()

returns the mask image

Returns: