Package gov.nih.mipav.model.algorithms

Class AlgorithmPointArea

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.AlgorithmPointArea

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener

public class AlgorithmPointArea
extends AlgorithmBase

DOCUMENT ME!

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
private float[]	averageIntensities	DOCUMENT ME!
private boolean	doColor	DOCUMENT ME!
private ModelImage	image	source image.
private boolean	leftSpace	if x is an even number, use the extra space on left half (otherwise right).
private float[][]	rgbAverageIntensities	DOCUMENT ME!
private float	threshold	DOCUMENT ME!
private boolean	topSpace	if y is an even number, use the extra space on the top half (otherwise bottom).
private boolean	useThreshold	DOCUMENT ME!
private int	xLocation	x value of the origin.
private int	xSpace	number of pixels in x direction.
private int	yLocation	y value of the origin.
private int	ySpace	number of pixels in y direction.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmPointArea(ModelImage srcImage, int xLoc, int yLoc, int xSpace, int ySpace, boolean leftSpace, boolean topSpace, boolean useThreshold, float threshold)	Creates a new AlgorithmPointArea object.

Method Summary

Modifier and Type	Method	Description
void	disposeLocal()	DOCUMENT ME!
float[]	getAverageIntensities()	DOCUMENT ME!
float[][]	getRGBAverageIntensities()	DOCUMENT ME!
void	runAlgorithm()	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

averageIntensities

private float[] averageIntensities

DOCUMENT ME!

doColor

private boolean doColor

DOCUMENT ME!

image

private ModelImage image

source image.

leftSpace

private boolean leftSpace

if x is an even number, use the extra space on left half (otherwise right).

rgbAverageIntensities

private float[][] rgbAverageIntensities

DOCUMENT ME!

threshold

private float threshold

DOCUMENT ME!

topSpace

private boolean topSpace

if y is an even number, use the extra space on the top half (otherwise bottom).

useThreshold

private boolean useThreshold

DOCUMENT ME!

xLocation

private int xLocation

x value of the origin.

xSpace

private int xSpace

number of pixels in x direction.

yLocation

private int yLocation

y value of the origin.

ySpace

private int ySpace

number of pixels in y direction.

Constructor Detail

AlgorithmPointArea

public AlgorithmPointArea(ModelImage srcImage,
                          int xLoc,
                          int yLoc,
                          int xSpace,
                          int ySpace,
                          boolean leftSpace,
                          boolean topSpace,
                          boolean useThreshold,
                          float threshold)

Creates a new AlgorithmPointArea object.

Parameters:

srcImage - DOCUMENT ME!

xLoc - DOCUMENT ME!

yLoc - DOCUMENT ME!

xSpace - DOCUMENT ME!

ySpace - DOCUMENT ME!

leftSpace - DOCUMENT ME!

topSpace - DOCUMENT ME!

useThreshold - DOCUMENT ME!

threshold - DOCUMENT ME!

Method Detail

disposeLocal

public void disposeLocal()

DOCUMENT ME!

getAverageIntensities

public float[] getAverageIntensities()

DOCUMENT ME!

Returns:

DOCUMENT ME!

getRGBAverageIntensities

public float[][] getRGBAverageIntensities()

DOCUMENT ME!

Returns:

DOCUMENT ME!

runAlgorithm

public void runAlgorithm()

DOCUMENT ME!

Specified by:

runAlgorithm in class AlgorithmBase