java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.AlgorithmLowerCompletion

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmLowerCompletion
extends AlgorithmBase
```
Author:

ilb 1.) The Watershed Transform: Definitions, Algorithms, and Parallelization Strategies by Jos B.T.M. Roerdink and Arnold Meijster, Fundamentals Informaticae 41 (2001), pp. 187-228. Algorithm 4.5 Algorithm for lowercompletion using a FIFO queue. A valued graph is called lower complete when each node which is not in a minimum has a neighboring node of lower value. If an image is lower complete, each pixel which is not in a minimum has a neighbor of lower grey value. This algorithm transforms an image to a lower complete image. Lower complete images are often used as inputs to watershed transforms.

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type Field Description

private int binNumber

private boolean limitBins

private boolean[][] minBuffer

private int numNeighbor
- Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
  destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped
- Fields inherited from class java.lang.Thread
  MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmLowerCompletion(ModelImage destImage, ModelImage srcImage, int numNeighbor, boolean limitBins, int binNumber)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean[][]`	`getMinBuffer()`
`void`	`run2D()`
`void`	`run3D()`
`void`	`runAlgorithm()`	Actually runs the algorithm.

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread
activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

numNeighbor
```
private int numNeighbor
```

limitBins
```
private boolean limitBins
```

binNumber
```
private int binNumber
```

minBuffer
```
private boolean[][] minBuffer
```

Constructor Detail

AlgorithmLowerCompletion

public AlgorithmLowerCompletion(ModelImage destImage,
                                ModelImage srcImage,
                                int numNeighbor,
                                boolean limitBins,
                                int binNumber)

Method Detail
- runAlgorithm
```
public void runAlgorithm()
```
  Description copied from class: AlgorithmBase
  
  Actually runs the algorithm. Implemented by inheriting algorithms.
  
  Specified by:
  
  runAlgorithm in class AlgorithmBase
- run2D
```
public void run2D()
```
- run3D
```
public void run3D()
```
- getMinBuffer
```
public boolean[][] getMinBuffer()
```

Modifier and Type	Field	Description
`private int`	`binNumber`
`private boolean`	`limitBins`
`private boolean[][]`	`minBuffer`
`private int`	`numNeighbor`

Class AlgorithmLowerCompletion

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

numNeighbor

limitBins

binNumber

minBuffer

Constructor Detail

AlgorithmLowerCompletion

Method Detail

runAlgorithm

run2D

run3D

getMinBuffer