Package gov.nih.mipav.model.algorithms

Class AlgorithmImageHessian

java.lang.Object

java.lang.Thread

gov.nih.mipav.model.algorithms.AlgorithmBase

gov.nih.mipav.model.algorithms.AlgorithmImageHessian

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener

public class AlgorithmImageHessian
extends AlgorithmBase

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Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields

Modifier and Type	Field	Description
private int	algorID	DOCUMENT ME!
private WildMagic.LibFoundation.NumericalAnalysis.Eigenf	eigenSystemAlgo	DOCUMENT ME!
private AlgorithmHessian	hessianAlgo	DOCUMENT ME!

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor	Description
AlgorithmImageHessian(ModelImage srcImg)	Creates a new AlgorithmImageHessian object.
AlgorithmImageHessian(ModelImage destImg, ModelImage srcImg, int id)	Creates a new AlgorithmImageHessian object.
AlgorithmImageHessian(ModelImage destImg, ModelImage srcImg, int id, float[] sigmas)	Creates a new AlgorithmImageHessian object.

Method Summary

Modifier and Type	Method	Description
void	finalize()	DOCUMENT ME!
private void	run2D()	DOCUMENT ME!
private void	run3D()	DOCUMENT ME!
void	runAlgorithm()	DOCUMENT ME!
private void	runBatch2D()	Algorithm is given a scale range and scale increment and computed the 1) hessian, 2) eigenvalues, 3) eigenvectors of the hessian.
private void	runBatch3D()	DOCUMENT ME!
private void	runInDest3D()	DOCUMENT ME!
private void	runInPlace3D()	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread

activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

algorID

private int algorID

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eigenSystemAlgo

private WildMagic.LibFoundation.NumericalAnalysis.Eigenf eigenSystemAlgo

DOCUMENT ME!

hessianAlgo

private AlgorithmHessian hessianAlgo

DOCUMENT ME!

Constructor Detail

AlgorithmImageHessian

public AlgorithmImageHessian(ModelImage srcImg)

Creates a new AlgorithmImageHessian object.

Parameters:

srcImg - DOCUMENT ME!

AlgorithmImageHessian

public AlgorithmImageHessian(ModelImage destImg,
                             ModelImage srcImg,
                             int id)

Creates a new AlgorithmImageHessian object.

Parameters:

destImg - DOCUMENT ME!

srcImg - DOCUMENT ME!

id - DOCUMENT ME!

AlgorithmImageHessian

public AlgorithmImageHessian(ModelImage destImg,
                             ModelImage srcImg,
                             int id,
                             float[] sigmas)

Creates a new AlgorithmImageHessian object.

Parameters:

destImg - DOCUMENT ME!

srcImg - DOCUMENT ME!

id - DOCUMENT ME!

sigmas - DOCUMENT ME!

Method Detail

finalize

public void finalize()

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Overrides:

finalize in class AlgorithmBase

runAlgorithm

public void runAlgorithm()

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Specified by:

runAlgorithm in class AlgorithmBase

run2D

private void run2D()

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run3D

private void run3D()

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runBatch2D

private void runBatch2D()

Algorithm is given a scale range and scale increment and computed the 1) hessian, 2) eigenvalues, 3) eigenvectors of the hessian. These values are saved in individual files for each scale

runBatch3D

private void runBatch3D()

DOCUMENT ME!

runInDest3D

private void runInDest3D()

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runInPlace3D

private void runInPlace3D()

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