Package gov.nih.mipav.model.algorithms

Class AlgorithmFRAP.FitWholeNLConModel3

java.lang.Object

gov.nih.mipav.model.algorithms.NLConstrainedEngine

gov.nih.mipav.model.algorithms.AlgorithmFRAP.FitWholeNLConModel3

Enclosing class:

AlgorithmFRAP

class AlgorithmFRAP.FitWholeNLConModel3
extends NLConstrainedEngine

DOCUMENT ME!

Field Summary

Fields

Modifier and Type	Field	Description
(package private) double	eps	DOCUMENT ME!
(package private) double[]	result	DOCUMENT ME!
(package private) int	routine	DOCUMENT ME!
(package private) double	upper	DOCUMENT ME!
private double[]	xData
private float[]	yData

Fields inherited from class gov.nih.mipav.model.algorithms.NLConstrainedEngine

a, absoluteConvergence, analyticalJacobian, bl, bounds, bu, ctrlMat, dyda, gues, internalScaling, iters, jacobian, maxIterations, nPts, outputMes, param, parameterConvergence, relativeConvergence, residuals, secondAllowed, stdv, tolerance

Constructor Summary

Constructors

Constructor	Description
FitWholeNLConModel3(int nPoints, double[] xData, float[] yData, double[] initial, double upper, int routine, double eps, double[] result)	Creates a new FitWholeNLConModel3 object.

Method Summary

Modifier and Type	Method	Description
void	driver()	Starts the analysis.
void	dumpResults()	Display results of displaying exponential fitting parameters.
void	fitToFunction(double[] a, double[] residuals, double[][] covarMat)	Fit to function.

Methods inherited from class gov.nih.mipav.model.algorithms.NLConstrainedEngine

dumpTestResults, fitToTestFunction, getChiSquared, getExitStatus, getIterations, getParameters, getResiduals, statusMessage

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

xData

private double[] xData

yData

private float[] yData

eps

double eps

DOCUMENT ME!

result

double[] result

DOCUMENT ME!

routine

int routine

DOCUMENT ME!

upper

double upper

DOCUMENT ME!

Constructor Detail

FitWholeNLConModel3

public FitWholeNLConModel3(int nPoints,
                           double[] xData,
                           float[] yData,
                           double[] initial,
                           double upper,
                           int routine,
                           double eps,
                           double[] result)

Creates a new FitWholeNLConModel3 object.

Parameters:

nPoints - DOCUMENT ME!

xData - DOCUMENT ME!

yData - DOCUMENT ME!

initial - DOCUMENT ME!

upper - DOCUMENT ME!

routine - DOCUMENT ME!

eps - DOCUMENT ME!

result - DOCUMENT ME!

Method Detail

driver

public void driver()

Starts the analysis.

Overrides:

driver in class NLConstrainedEngine

dumpResults

public void dumpResults()

Display results of displaying exponential fitting parameters.

fitToFunction

public void fitToFunction(double[] a,
                          double[] residuals,
                          double[][] covarMat)

Fit to function.

Specified by:

fitToFunction in class NLConstrainedEngine

Parameters:

a - The x value of the data point.

residuals - The best guess parameter values.

covarMat - The derivative values of y with respect to fitting parameters.