Package gov.nih.mipav.model.algorithms

Class AlgorithmFRAP.FitWholeNLConInt2

java.lang.Object

gov.nih.mipav.model.algorithms.NLConstrainedEngine

gov.nih.mipav.model.algorithms.AlgorithmFRAP.FitWholeNLConInt2

Enclosing class:

AlgorithmFRAP

class AlgorithmFRAP.FitWholeNLConInt2
extends NLConstrainedEngine

DOCUMENT ME!

Field Summary

Fields

Modifier and Type	Field	Description
(package private) double	bound	DOCUMENT ME!
(package private) double	epsabs	DOCUMENT ME!
(package private) double	epsrel	DOCUMENT ME!
(package private) int	inf	DOCUMENT ME!
(package private) int	limit	DOCUMENT ME!
(package private) double	lower	DOCUMENT ME!
(package private) double[]	result	DOCUMENT ME!
(package private) double	upper	DOCUMENT ME!
(package private) double[]	xData
(package private) float[]	yData

Fields inherited from class gov.nih.mipav.model.algorithms.NLConstrainedEngine

a, absoluteConvergence, analyticalJacobian, bl, bounds, bu, ctrlMat, dyda, gues, internalScaling, iters, jacobian, maxIterations, nPts, outputMes, param, parameterConvergence, relativeConvergence, residuals, secondAllowed, stdv, tolerance

Constructor Summary

Constructors

Constructor	Description
FitWholeNLConInt2(int nPoints, double[] xData, float[] yData, double[] initial, double[] result)	Creates a new FitWholeNLConInt2 object.

Method Summary

Modifier and Type	Method	Description
void	driver()	Starts the analysis.
void	dumpResults()	Display results of displaying exponential fitting parameters.
void	fitToFunction(double[] a, double[] residuals, double[][] covarMat)	Fit to function.

Methods inherited from class gov.nih.mipav.model.algorithms.NLConstrainedEngine

dumpTestResults, fitToTestFunction, getChiSquared, getExitStatus, getIterations, getParameters, getResiduals, statusMessage

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

xData

double[] xData

yData

float[] yData

bound

double bound

DOCUMENT ME!

epsabs

double epsabs

DOCUMENT ME!

epsrel

double epsrel

DOCUMENT ME!

inf

int inf

DOCUMENT ME!

limit

int limit

DOCUMENT ME!

lower

double lower

DOCUMENT ME!

result

double[] result

DOCUMENT ME!

upper

double upper

DOCUMENT ME!

Constructor Details

FitWholeNLConInt2

public FitWholeNLConInt2(int nPoints,
 double[] xData,
 float[] yData,
 double[] initial,
 double[] result)

Creates a new FitWholeNLConInt2 object.

Parameters:

nPoints - DOCUMENT ME!

xData - DOCUMENT ME!

yData - DOCUMENT ME!

initial - DOCUMENT ME!

result - DOCUMENT ME!

Method Details

driver

public void driver()

Starts the analysis.

Overrides:

driver in class NLConstrainedEngine

dumpResults

public void dumpResults()

Display results of displaying exponential fitting parameters.

fitToFunction

public void fitToFunction(double[] a,
 double[] residuals,
 double[][] covarMat)

Fit to function.

Specified by:

fitToFunction in class NLConstrainedEngine

Parameters:

a - The x value of the data point.

residuals - The best guess parameter values.

covarMat - The derivative values of y with respect to fitting parameters.