Difference between revisions of "MIPAV toolbars"

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=[[MIPAV toolbars]]=
 
<div style="font-style: normal; font-weight: normal; margin-bottom: 6pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> After you open an image in MIPAV and the MIPAV window expands to display all of its menus and toolbars, such as<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000">  <span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">VOI toolbar. </font>'''</span>Volume of interest toolbar ([MIPAV_QuickStart.html#2693625 Figure 12]). The VOI toolbar contains tools that help you in selecting the specific area of interest on the image.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000">  <span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Paint toolbar. </font>'''</span>The Paint toolbar ([MIPAV_QuickStart.html#2693828 Figure 13]) includes tools that allow you to add, adjust, or remove colors and color intensity, erase paint, and adjust the opacity level of the paint.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000">  <span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Scripting toolbar. </font>'''</span>The Scripting toolbar allows you to locate and run previously recorded scripts, or macros, that contain two or more algorithms on images. See [MIPAV_QuickStart.html#2693906 Figure 14].<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000">  <span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Image toolbar. </font>'''</span>The Image toolbar includes tools for opening, printing, saving, maximizing, and minimizing an image; converting an image from gray scale to color or from color to gray scale; and adding to and removing slices from an image or changing their order; and rotating, cropping, and flipping an image. See [MIPAV_QuickStart.html#2694161 Figure 15].<br /></font></div>
 
 
=Testing    By default, the MIPAV window displays only the VOI and Image toolbars.=
 
 
 
 
==Testing 2 with table converter==
 
 
== MIPAV toolbars ==
 
== MIPAV toolbars ==
  
<div style="font-style: normal; font-weight: normal; margin-bottom: 6pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">After you open an image in MIPAV and the MIPAV window expands to display all of its menus and toolbars, such as<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000"><span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">VOI toolbar. </font>'''</span>Volume of interest toolbar ([MIPAV_QuickStart.html#2693625 Figure 12]). The VOI toolbar contains tools that help you in selecting the specific area of interest on the image.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000"><span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Paint toolbar. </font>'''</span>The Paint toolbar ([MIPAV_QuickStart.html#2693828 Figure 13]) includes tools that allow you to add, adjust, or remove colors and color intensity, erase paint, and adjust the opacity level of the paint.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000"><span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Scripting toolbar. </font>'''</span>The Scripting toolbar allows you to locate and run previously recorded scripts, or macros, that contain two or more algorithms on images. See [MIPAV_QuickStart.html#2693906 Figure 14].<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 24pt; margin-right: 0pt; margin-top: 5pt; text-align: left; text-decoration: none; text-indent: -24pt; text-transform: none; vertical-align: baseline"><font color="#000000"><span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">Image toolbar. </font>'''</span>The Image toolbar includes tools for opening, printing, saving, maximizing, and minimizing an image; converting an image from gray scale to color or from color to gray scale; and adding to and removing slices from an image or changing their order; and rotating, cropping, and flipping an image. See [MIPAV_QuickStart.html#2694161 Figure 15].<br /></font></div>
+
After you open an image in MIPAV and the MIPAV window expands to display all of its menus and toolbars, such as:
  
By default, the MIPAV window displays only the VOI and Image toolbars.
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''' VOI toolbar''' contains tools that help you in selecting the specific area of interest on the image. See [[Delineating volumes of interest (VOIs)| Volumes of Interest]].
  
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> {| border="1" cellpadding="5" cellspacing="0" | |- | <div class="CellBody">Icon</div> | <div class="CellBody">Name</div> | <div class="CellBody">Icon</div> | <div class="CellBody">Name</div> | <div class="CellBody">Icon</div> | <div class="CellBody">Name</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" />
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'''Paint toolbar''' includes tools that allow you to add, adjust, or remove colors and color intensity, erase paint, and adjust the opacity level of the paint.
  
| [[Image:default.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Default Mode</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" />
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'''Scripting toolbar''' allows you to locate and run previously recorded scripts, or macros, that contain two or more algorithms on images.  
  
[[Image:ProtractorToolIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Protractor tool</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" />
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'''Image toolbar''' includes tools for opening, printing, saving, maximizing, and minimizing an image; converting an image from gray scale to color or from color to gray scale; and adding to and removing slices from an image or changing their order; and rotating, cropping, and flipping an image. See [[Opening and loading image files]], [[Displaying images]], [[Changing Image Contrast]].
  
| [[Image:ChangeColorVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Change VOI color</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:AnnotationToolICo.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Annotation Tool</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:RectangleVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Draw rectangle VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:UndoIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Undo</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:pointVOI.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Draw a point VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:PolylineVOI.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Draw polyline VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:CutVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Cut VOI</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:InterSlicePolilineIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Draw inter-slice polyline</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:LevelsetVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Levelset VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:CopyIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Copy VOI</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:LineVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Draw line VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:3DrectangularVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Draw 3D rectangular VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:PasteIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Paste contour</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:PropagateLeftIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Propagate VOI down</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:propagateBothSideIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Propagate both sides</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:PropagateRightIco.jpg]] |}<br clear="all" /><br /></font></div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div><div class="CellBody">Propagate VOI up</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:SplitVOIContour.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Split VOI contour</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:LifeWireVOIIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Live wire VOI</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:VIewVOIProperties.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody"> View VOI properties</div> |- | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:QuickAndVOIMaskOperationIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Quick AND VOI mask operation</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"><br clear="all" /> {| align="center" | [[Image:QuickNOTVOIMaskOperationIco.jpg]] |}<br clear="all" /><br /></font></div> | <div class="CellBody">Quick NOT VOI operation</div> | <div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000">Â <br /></font></div> | <div class="CellBody">Â </div> |- | colspan="6" rowspan="1" | <div style="font-style: normal; margin-bottom: 3pt; margin-left: 0pt; margin-right: 0pt; margin-top: 9pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#000000">Figure 12. VOI Toolbar<br /></font>'''</div> |} </font></div>
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=== Toolbars displayed by default ===
  
==end of testing 2==
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By default, the MIPAV window displays only the VOI and Image toolbars.
  
 +
<div id="VoiToolbar"></div>
  
 +
==VOI Toolbar==
  
 
{| border="1" cellpadding="5"
 
{| border="1" cellpadding="5"
Line 41: Line 35:
 
<div class="CellBody">Name</div>
 
<div class="CellBody">Name</div>
 
|-
 
|-
[[Image:default.jpg]]
+
|[[Image:default.jpg]]
 
|Default Mode
 
|Default Mode
|[[Image:ProtractorToolIco.jpg|center]]
+
|[[Image:ProtractorToolIco.jpg]]
 
+
 
|Protractor tool
 
|Protractor tool
 
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|[[Image:ChangeColorVOIIco.jpg]]
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />
+
 
+
|[[Image:ChangeColorVOIIco.jpg|center]]
+
 
+
 
|Change VOI color
 
|Change VOI color
 
|-
 
|-
[[Image:AnnotationToolICo.jpg|center]]
+
|[[Image:AnnotationToolICo.jpg]]
 
+
|Annotation Tool
Annotation Tool
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|[[Image:RectangleVOIIco.jpg]]
|
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|Draw rectangle VOI
[[Image:RectangleVOIIco.jpg|center]]
+
|[[Image:UndoIco.jpg]]
|
+
Draw rectangle VOI</div>
+
|
+
[[Image:UndoIco.jpg]]
+
 
|Undo
 
|Undo
|
 
[[Image:pointVOI.jpg]]
 
|
 
Draw a point VOI
 
 
|-
 
|-
[[Image:PolylineVOI.jpg]]
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|[[Image:pointVOI.jpg]]
|Draw polyline VOI</div>
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|Draw a point VOI
 +
|[[Image:PolylineVOI.jpg]]
 +
|Draw polyline VOI
 
|[[Image:CutVOIIco.jpg]]
 
|[[Image:CutVOIIco.jpg]]
 
|Cut VOI
 
|Cut VOI
Line 75: Line 58:
 
|[[Image:InterSlicePolilineIco.jpg]]
 
|[[Image:InterSlicePolilineIco.jpg]]
 
|Draw inter-slice polyline
 
|Draw inter-slice polyline
 
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|[[Image:LevelsetVOIIco.jpg|center]]
|
+
[[Image:LevelsetVOIIco.jpg|center]]
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|Levelset VOI
 
|Levelset VOI
|
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|[[Image:CopyIco.jpg|center]]
[[Image:CopyIco.jpg|center]]
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|Copy VOI
 
|Copy VOI
 
|-
 
|-
|
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|[[Image:LineVOIIco.jpg|center]]
[[Image:LineVOIIco.jpg|center]]
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|Draw line VOI
|Draw line VOI</div>
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|[[Image:3DrectangularVOIIco.jpg|center]]
|
+
[[Image:3DrectangularVOIIco.jpg|center]]
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|Draw 3D rectangular VOI
 
|Draw 3D rectangular VOI
|
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|[[Image:PasteIco.jpg|center]]
[[Image:PasteIco.jpg|center]]
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|Paste contour
 
|Paste contour
 +
|-
 +
|[[Image:PropagateLeftIco.jpg|center]]
 +
|Propagate VOI down
 +
|[[Image:propagateBothSideIco.jpg]]
 +
|Propagate both sides
 +
|[[Image:PropagateRightIco.jpg]]
 +
|Propagate VOI up
 +
|-
 +
|[[Image:SplitVOIContour.jpg]]
 +
|Split VOI contour
 +
|[[Image:LifeWireVOIIco.jpg]]
 +
|Live wire VOI
 +
|[[Image:VIewVOIProperties.jpg]]
 +
|View VOI properties
 +
|-
 +
|[[Image:QuickAndVOIMaskOperationIco.jpg]]
 +
|Quick AND VOI mask operation
 +
|[[Image:QuickNOTVOIMaskOperationIco.jpg]]
 +
|Quick NOT VOI operation
 +
||
 +
|-
 +
|[[Image:Icon3DvoiInterection.jpg]]
 +
|Create 3D VOI intersection
 +
|[[Image:Icon3DvoiUnion.jpg]]
 +
|Create 3D VOI union
 +
||
 +
|}
 +
 +
<div id="PaintToolbar"></div>
 +
==Paint Toolbar==
 +
 +
{| border="1" cellpadding="5"
 +
|+
 
|-
 
|-
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />
+
<div class="CellBody">Icon</div>
 
|
 
|
[[Image:PropagateLeftIco.jpg|center]]
+
<div class="CellBody">Name</div>
 
|
 
|
<div class="CellBody">Propagate VOI down</div>
+
<div class="CellBody">Icon</div>
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
<div class="CellBody">Name</div>
 
|
 
|
[[Image:propagateBothSideIco.jpg]]
+
<div class="CellBody">Icon</div>
|}<br clear="all" /><br /></font></div>
+
|
+
<div class="CellBody">Propagate both sides</div>
+
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
<div class="CellBody">Name</div>
|
+
[[Image:PropagateRightIco.jpg]]
+
|}<br clear="all" /><br /></font></div>
+
|
+
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> Â <br /></font></div> <div class="CellBody">Propagate VOI up</div>
+
 
|-
 
|-
 +
|[[Image:AddBlankMaskIco.jpg]]
 +
|Add a blank mask
 +
|[[Image:FillsAreaIco.jpg]]
 +
|Fill an area with color
 +
|[[Image:PaintBrushEditorIco.jpg]]
 +
|Paint brush editor
 +
|-
 +
|[[Image:OpenMaskFromFileIco.jpg]]
 +
|Open a mask from a file</div>
 +
|[[Image:ErasesPaintIco.jpg]]
 +
|Erase a paint
 +
|[[Image:ChoosePaintColorIco.jpg]]
 +
|Change paint color
 +
|-
 +
|[[Image:SaveCurrntMaskIco.jpg]]
 +
|Save the current mask
 +
|[[Image:ErasePaintFormCurrentFrameIco.jpg]]
 +
|Erase a paint from a current frame
 +
|[[Image:ChangeOpacityOfPaintIco.jpg]]
 +
|Change opacity of the paint
 +
|-
 +
|[[Image:AndMaskOperationIco.jpg]]
 +
|AND mask operation
 +
|[[Image:EraseAllPaint.jpg]]
 +
|Erase all paints
 +
|[[Image:DisplayBordersAroundPaintedAreaIco.jpg]]
 +
|Display a border around painted areas</div>
 +
|-
 +
|[[Image:DrawIsongBrushIco.jpg]]
 +
|Draw using a brush
 +
|[[Image:PropagatePainttoPreviousSliceIco.jpg]]
 +
|Propagate the paint to the previous slice
 +
|[[Image:MasksInsidePaintedAreaIco.jpg]]
 +
|Masks the inside of the painted area
 +
|-
 +
|[[Image:LoadAdvancedPaintToolsIco.jpg]]
 +
|Load advanced brush tools
 +
|[[Image:PropagatePaintBothSidesIco.jpg]]
 +
|Propagate the paint both sides
 +
|[[Image:MasksOutsidePaintedAreaIco.jpg]]
 +
|Masks the outside of the painted area
 +
|-
 +
|[[Image:PIckColorIco.jpg]]
 +
|Pick up a color from an image
 +
|[[Image:PropagatePainttoNextSliceIco.jpg]]
 +
|Propagate the paint to the next slice
 +
|[[Image:UndoIco.jpg]]
 +
|Undo
 +
|-
 +
|[[Image:CalculateVolumePaintIco.jpg]]
 +
|Calculate volume
 +
|[[Image:LoadPOwerPaintToolIco.jpg]]
 +
|Load power paint tools
 +
||
 +
|}
 +
 +
<div id="ScriptingToolbar"></div>
 +
==Scripting Toolbar==
 +
 +
{| border="1" cellpadding="5"
 +
|+
 +
|-
 +
| rowspan="1" colspan="3" |
 +
<div class="CellBody">Icon</div>
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
<div class="CellBody">Name</div>
 
|
 
|
[[Image:SplitVOIContour.jpg]]
+
<div class="CellBody">Icon</div>
|}<br clear="all" /><br /></font></div>
+
|
+
<div class="CellBody">Split VOI contour</div>
+
|
+
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
|
+
[[Image:LifeWireVOIIco.jpg]]
+
|}<br clear="all" /><br /></font></div>
+
|
+
<div class="CellBody">Live wire VOI</div>
+
|
+
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
|
+
[[Image:VIewVOIProperties.jpg]]
+
|}<br clear="all" /><br /></font></div>
+
 
|
 
|
<div class="CellBody"> View VOI properties</div>
+
<div class="CellBody">Name</div>
 +
|-
 +
|[[Image:ScriptsDirectoryIco.jpg]]
 +
|Open the Scripts Home catalogue
 +
|[[Image:RefreshScriptsIco.jpg]]
 +
|Refresh the Scripts Home catalogue
 +
|-
 +
|[[Image:CurrentScriptIco.jpg]]
 +
|Show the current script to run
 +
|[[Image:RusSelectedScriptIco.jpg]]
 +
|Run the script from Current Scripts
 +
|-
 +
||||
 +
|[[Image:StartRecordingScriptIco.jpg]]
 +
|Start recording the script
 +
|}
 +
 
 +
<div id="ImageToolbar"></div>
 +
==Image Toolbar==
 +
 
 +
{| border="1" cellpadding="5"
 +
|+
 
|-
 
|-
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
<div class="CellBody">Icon</div>
 
|
 
|
[[Image:QuickAndVOIMaskOperationIco.jpg]]
+
<div class="CellBody">Name</div>
|}<br clear="all" /><br /></font></div>
+
 
|
 
|
<div class="CellBody">Quick AND VOI mask operation</div>
+
<div class="CellBody">Icon</div>
 
|
 
|
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br clear="all" />{| align="center"
+
<div class="CellBody">Name</div>
 
|
 
|
[[Image:QuickNOTVOIMaskOperationIco.jpg]]
+
<div class="CellBody">Icon</div>
|}<br clear="all" /><br /></font></div>
+
 
|
 
|
<div class="CellBody">Quick NOT VOI operation</div>
+
<div class="CellBody">Name</div>
|
+
<div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> Â <br /></font></div>
+
|
+
<div class="CellBody">Â </div>
+
 
|-
 
|-
| rowspan="1" colspan="6" |
+
|[[Image:OpenImageIco.jpg]]
<div style="font-style: normal; margin-bottom: 3pt; margin-left: 0pt; margin-right: 0pt; margin-top: 9pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#000000"> Figure 12. VOI Toolbar<br /></font>'''</div>
+
|Open image, CTRL F
 +
|[[Image:AdjustWindowLevelIco.jpg]]
 +
|Adjust window and level
 +
|[[Image:DecrementImageSliceIco.jpg]]
 +
|Decrement image slice
 +
|-
 +
|[[Image:SaveImageIco.jpg]]
 +
|Save image, CTRL S
 +
|[[Image:QuickLUTIcoa.jpg]]
 +
|Quick LUT
 +
|[[Image:IncrementImageSliceIco.jpg]]
 +
|Increment image slice
 +
|-
 +
|[[Image:PrintImageIco.jpg]]
 +
|Print image
 +
|[[Image:ResetLUTIcoa.jpg]]
 +
|Reset LUT
 +
|[[Image:LinkImagesIco.jpg]]
 +
|Link images
 +
|-
 +
|[[Image:CaptureImageIco.jpg]]
 +
|Capture image to TIFF file
 +
|[[Image:InvertLUTIcoa.jpg]]
 +
|Invert LUT
 +
|[[Image:ZoomInIco.jpg]]
 +
|Zoom in
 +
|-
 +
|[[Image:ViewHeaderIco.jpg]]
 +
|View header, CTRL H
 +
|[[Image:GrayLUTIcoa.jpg]]
 +
|Gray LUT
 +
|[[Image:ZoomOutIco.jpg]]
 +
|Zoom out
 +
|-
 +
|[[Image:EditAttributesIco.jpg]]
 +
|Edit attributes, CTRL E
 +
|[[Image:HotMetalLUTIco.jpg]]
 +
|Hot metal LUT
 +
|[[Image:MagnifyRegionIco.jpg]]
 +
|Magnify region</div>
 +
|-
 +
|[[Image:DisplayLookupTableIco.jpg]]
 +
|Display Lookup table
 +
|[[Image:OPenUserDefinedLUTICo.jpg]]
 +
|Open user-defined LUT
 +
|[[Image:WindowRegionOfImageBIco.jpg]]
 +
|Window region of Image B
 +
|-
 +
|[[Image:CTPretestIco.jpg]]
 +
|CT preset function
 +
|[[Image:SaveUserDefinedLUTIco.jpg]]
 +
|Save LUT
 +
|[[Image:CheckerBoardIco.jpg]]
 +
|Checker board
 +
|-
 +
|[[Image:Magnify11Ico.jpg]]
 +
|Magnify 1:1
 +
|[[Image:TriPlanarViewIco.jpg]]
 +
|Tri-planar view
 +
|[[Image:VolumeTriPlanarIco.jpg]]
 +
|Volume Tri-planar view
 +
|-
 +
|[[Image:VolumeRendererIco.jpg]]
 +
|Volume Renderer
 +
|[[Image:VolumeRendererGPUIco.jpg]]
 +
|GPU based volume renderer
 +
|[[Image:GPURenderingIco.jpg]]
 +
|GPU rendering
 +
|-
 +
|[[Image:LightBoxViewIco.jpg]]
 +
|View light box
 +
|[[Image:FlipVerticallyIco.jpg]]
 +
|Flip horizontally
 +
|[[Image:FlipHorizontallyIco.jpg]]
 +
|Flip vertically
 +
|-
 +
|[[Image:MultiHistoRenderingIco.jpg]]
 +
|Multi histogram rendering
 +
||||
 +
||||
 +
 
 
|}
 
|}
  
==[[Displaying MIPAV Toolbars]]==
+
== See also: ==
 +
*[[Displaying MIPAV Toolbars]]
 +
*[[Displaying images]]
 +
*[[Modifying image resolutions]]
 +
*[[Changing Image Contrast]]
 +
*[[Creating new images]]
 +
 
 +
[[Category: Help]]
 +
[[Category: Getting started]]

Latest revision as of 18:57, 25 April 2012

MIPAV toolbars

After you open an image in MIPAV and the MIPAV window expands to display all of its menus and toolbars, such as:

VOI toolbar contains tools that help you in selecting the specific area of interest on the image. See Volumes of Interest.

Paint toolbar includes tools that allow you to add, adjust, or remove colors and color intensity, erase paint, and adjust the opacity level of the paint.

Scripting toolbar allows you to locate and run previously recorded scripts, or macros, that contain two or more algorithms on images.

Image toolbar includes tools for opening, printing, saving, maximizing, and minimizing an image; converting an image from gray scale to color or from color to gray scale; and adding to and removing slices from an image or changing their order; and rotating, cropping, and flipping an image. See Opening and loading image files, Displaying images, Changing Image Contrast.

Toolbars displayed by default

By default, the MIPAV window displays only the VOI and Image toolbars.

VOI Toolbar

Icon
Name
Icon
Name
Icon
Name
Default.jpg Default Mode ProtractorToolIco.jpg Protractor tool ChangeColorVOIIco.jpg Change VOI color
AnnotationToolICo.jpg Annotation Tool RectangleVOIIco.jpg Draw rectangle VOI UndoIco.jpg Undo
PointVOI.jpg Draw a point VOI PolylineVOI.jpg Draw polyline VOI CutVOIIco.jpg Cut VOI
InterSlicePolilineIco.jpg Draw inter-slice polyline
LevelsetVOIIco.jpg
Levelset VOI
CopyIco.jpg
Copy VOI
LineVOIIco.jpg
Draw line VOI
3DrectangularVOIIco.jpg
Draw 3D rectangular VOI
PasteIco.jpg
Paste contour
PropagateLeftIco.jpg
Propagate VOI down PropagateBothSideIco.jpg Propagate both sides PropagateRightIco.jpg Propagate VOI up
SplitVOIContour.jpg Split VOI contour LifeWireVOIIco.jpg Live wire VOI VIewVOIProperties.jpg View VOI properties
QuickAndVOIMaskOperationIco.jpg Quick AND VOI mask operation QuickNOTVOIMaskOperationIco.jpg Quick NOT VOI operation
Icon3DvoiInterection.jpg Create 3D VOI intersection Icon3DvoiUnion.jpg Create 3D VOI union

Paint Toolbar

Icon
Name
Icon
Name
Icon
Name
AddBlankMaskIco.jpg Add a blank mask FillsAreaIco.jpg Fill an area with color PaintBrushEditorIco.jpg Paint brush editor
OpenMaskFromFileIco.jpg Open a mask from a file</div> ErasesPaintIco.jpg Erase a paint ChoosePaintColorIco.jpg Change paint color
SaveCurrntMaskIco.jpg Save the current mask ErasePaintFormCurrentFrameIco.jpg Erase a paint from a current frame ChangeOpacityOfPaintIco.jpg Change opacity of the paint
AndMaskOperationIco.jpg AND mask operation EraseAllPaint.jpg Erase all paints DisplayBordersAroundPaintedAreaIco.jpg Display a border around painted areas</div>
DrawIsongBrushIco.jpg Draw using a brush PropagatePainttoPreviousSliceIco.jpg Propagate the paint to the previous slice MasksInsidePaintedAreaIco.jpg Masks the inside of the painted area
LoadAdvancedPaintToolsIco.jpg Load advanced brush tools PropagatePaintBothSidesIco.jpg Propagate the paint both sides MasksOutsidePaintedAreaIco.jpg Masks the outside of the painted area
PIckColorIco.jpg Pick up a color from an image PropagatePainttoNextSliceIco.jpg Propagate the paint to the next slice UndoIco.jpg Undo
CalculateVolumePaintIco.jpg Calculate volume LoadPOwerPaintToolIco.jpg Load power paint tools

Scripting Toolbar

Icon
Name
Icon
Name
ScriptsDirectoryIco.jpg Open the Scripts Home catalogue RefreshScriptsIco.jpg Refresh the Scripts Home catalogue
CurrentScriptIco.jpg Show the current script to run RusSelectedScriptIco.jpg Run the script from Current Scripts
StartRecordingScriptIco.jpg Start recording the script

Image Toolbar

Icon
Name
Icon
Name
Icon
Name
OpenImageIco.jpg Open image, CTRL F AdjustWindowLevelIco.jpg Adjust window and level DecrementImageSliceIco.jpg Decrement image slice
SaveImageIco.jpg Save image, CTRL S QuickLUTIcoa.jpg Quick LUT IncrementImageSliceIco.jpg Increment image slice
PrintImageIco.jpg Print image ResetLUTIcoa.jpg Reset LUT LinkImagesIco.jpg Link images
CaptureImageIco.jpg Capture image to TIFF file InvertLUTIcoa.jpg Invert LUT ZoomInIco.jpg Zoom in
ViewHeaderIco.jpg View header, CTRL H GrayLUTIcoa.jpg Gray LUT ZoomOutIco.jpg Zoom out
EditAttributesIco.jpg Edit attributes, CTRL E HotMetalLUTIco.jpg Hot metal LUT MagnifyRegionIco.jpg Magnify region</div>
DisplayLookupTableIco.jpg Display Lookup table OPenUserDefinedLUTICo.jpg Open user-defined LUT WindowRegionOfImageBIco.jpg Window region of Image B
CTPretestIco.jpg CT preset function SaveUserDefinedLUTIco.jpg Save LUT CheckerBoardIco.jpg Checker board
Magnify11Ico.jpg Magnify 1:1 TriPlanarViewIco.jpg Tri-planar view VolumeTriPlanarIco.jpg Volume Tri-planar view
VolumeRendererIco.jpg Volume Renderer VolumeRendererGPUIco.jpg GPU based volume renderer GPURenderingIco.jpg GPU rendering
LightBoxViewIco.jpg View light box FlipVerticallyIco.jpg Flip horizontally FlipHorizontallyIco.jpg Flip vertically
MultiHistoRenderingIco.jpg Multi histogram rendering

See also: