Package gov.nih.mipav.view.renderer.WildMagic.TBI

Class JDialogConvertVOITBI

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Window

java.awt.Dialog

javax.swing.JDialog

gov.nih.mipav.view.dialogs.JDialogBase

gov.nih.mipav.view.dialogs.JDialogSaveMergedVOIs

gov.nih.mipav.view.renderer.WildMagic.TBI.JDialogConvertVOITBI

All Implemented Interfaces:

DialogDefaultsInterface, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants

public class JDialogConvertVOITBI
extends JDialogSaveMergedVOIs

This dialog converts the VOI lines or VOI contour lines into .ply file format as the point cloud based file. The cloud points is written as a .ply file, which can be read from MeshLab software. Current assumption is the TBI brain file is coronal image.

Version:

22 Oct, 2014

Author:

Ruida Cheng

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase

JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction

Nested classes/interfaces inherited from class javax.swing.JDialog

JDialog.AccessibleJDialog

Nested classes/interfaces inherited from class java.awt.Dialog

Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityType

Nested classes/interfaces inherited from class java.awt.Window

Window.AccessibleAWTWindow, Window.Type

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field	Description
JButton	buttonCoronal	Choose button for each VOI and ply file.
JPanel	buttonPanel	Button panel to hold the OK button, Cancel button, and Help button.
JButton	buttonPly	Choose button for each VOI and ply file.
private final InstanceVOI	CoronalVOIs
private JLabel	labelCoronalVOI
private JLabel	labelPlyFile
private final InstanceVOI	PlyInstance	Ply file instance.
JTextField	textFieldCoronalVOI	Text field for each VOI and ply file.
JTextField	textFieldPlyFile	Text field for each VOI and ply file.
JPanel	VOIsPanel

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogSaveMergedVOIs

buttonAxial, buttonSagittal, labelAxialVOI, labelSagittalVOI, msgPanel, textFieldAxialVOI, textFieldSagittalVOI

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase

applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager

Fields inherited from class javax.swing.JDialog

accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog

DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants

DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors

Constructor	Description
JDialogConvertVOITBI(Frame theParentFrame)	Constructor for Merging the 3 VOIs and save into one cloudy points file.

Method Summary

Modifier and Type	Method	Description
void	actionPerformed(ActionEvent event)	handler the button click evens.
protected JPanel	buildButtons()	Builds button panel consisting of OK, Cancel and Help buttons.
protected JButton	buildCancelButton()	Builds the cancel button.
protected JButton	buildHelpButton()	Builds the help button.
protected JButton	buildOKButton()	Builds the OK button.
private void	init()	Sets up GUI and displays the dialog.
void	writePlyFile()	Write the cloud points from the 3 VOIs into one .ply file.

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogSaveMergedVOIs

saveFile

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase

buildApplyButton, buildCancelButton, buildCloseButton, buildImageComboBox, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JDialog

addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog

addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

labelCoronalVOI

private JLabel labelCoronalVOI

labelPlyFile

private JLabel labelPlyFile

textFieldCoronalVOI

public JTextField textFieldCoronalVOI

Text field for each VOI and ply file.

textFieldPlyFile

public JTextField textFieldPlyFile

Text field for each VOI and ply file.

buttonCoronal

public JButton buttonCoronal

Choose button for each VOI and ply file.

buttonPly

public JButton buttonPly

Choose button for each VOI and ply file.

VOIsPanel

public JPanel VOIsPanel

buttonPanel

public JPanel buttonPanel

Button panel to hold the OK button, Cancel button, and Help button.

CoronalVOIs

private final InstanceVOI CoronalVOIs

PlyInstance

private final InstanceVOI PlyInstance

Ply file instance. This instance only uses the file dir and file name.

Constructor Details

JDialogConvertVOITBI

public JDialogConvertVOITBI(Frame theParentFrame)

Constructor for Merging the 3 VOIs and save into one cloudy points file.

Parameters:

theParentFrame -

Method Details

actionPerformed

public void actionPerformed(ActionEvent event)

handler the button click evens.

Specified by:

actionPerformed in interface ActionListener

Overrides:

actionPerformed in class JDialogSaveMergedVOIs

writePlyFile

public void writePlyFile()

Write the cloud points from the 3 VOIs into one .ply file. The .ply file is readable for MeshLab.

Overrides:

writePlyFile in class JDialogSaveMergedVOIs

init

private void init()

Sets up GUI and displays the dialog.

buildButtons

protected JPanel buildButtons()

Builds button panel consisting of OK, Cancel and Help buttons.

Overrides:

buildButtons in class JDialogSaveMergedVOIs

Returns:

JPanel that has ok, cancel, and help buttons

buildOKButton

protected JButton buildOKButton()

Builds the OK button. Sets it internally as well return the just-built button.

Overrides:

buildOKButton in class JDialogSaveMergedVOIs

Returns:

JButton ok button

buildCancelButton

protected JButton buildCancelButton()

Builds the cancel button. Sets it internally as well return the just-built button.

Overrides:

buildCancelButton in class JDialogSaveMergedVOIs

Returns:

JButton cancel button

buildHelpButton

protected JButton buildHelpButton()

Builds the help button. Sets it internally as well return the just-built button.

Overrides:

buildHelpButton in class JDialogSaveMergedVOIs

Returns:

JButton help button