Package gov.nih.mipav.view.dialogs

Class JDialogSwapSlicesVolumes

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogSwapSlicesVolumes
All Implemented Interfaces:
AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, ActionDiscovery, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogSwapSlicesVolumes extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery
Creates the dialog for swapping slices/volumes. Allows 3D or 4D images.
Version:
v0.9 2012
Author:
Justin Senseney
See Also:

  • Field Details

    • swapAlgo

      private AlgorithmSwapSlicesVolume swapAlgo
      Running algorithm

    • mode

      private JDialogSwapSlicesVolumes.SwapMode mode
      Swap mode, either 3D or 4D

    • nSlices

      private int nSlices
      Number of slices in mode

    • srcImage

      private ModelImage srcImage
      srcImage for keeping track of slices

    • swapVolume

      private ModelImage swapVolume
      Result image

    • sliceRenum

      private int[][] sliceRenum
      Reordering of slices/volumes

    • displayTable

      private JTable displayTable
      The visible JTable for slice/volume reordering

    • undoModel

      private DefaultTableModel undoModel
      Model to restore last model of JTable

    • newImage

      private JRadioButton newImage
      Radio buttons for alg output options.

    • replaceImage

      private JRadioButton replaceImage
      Radio buttons for alg output options.

    • inPlace

      private boolean inPlace
      Whether to perform alg in place

    • appendButton

      private JButton appendButton
      Button for appending selected rows to end of JTable

  • Constructor Details

    • JDialogSwapSlicesVolumes

      public JDialogSwapSlicesVolumes()
      Empty constructor needed for dynamic instantiation (used during scripting).

    • JDialogSwapSlicesVolumes

      public JDialogSwapSlicesVolumes(Frame theParentFrame, ModelImage im, JDialogSwapSlicesVolumes.SwapMode mode)
      Creates new dialog for removing slices.
      Parameters:
      theParentFrame - Parent frame
      im - Source image

  • Method Details

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase
      Parameters:
      event - Event that triggers function

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • callAlgorithm

      protected void callAlgorithm()
      Once all the necessary variables are set, call the Swap Slices algorithm based on what type of image this is and whether or not there is a separate destination image.
      Specified by:
      callAlgorithm in class JDialogScriptableBase

    • doPostAlgorithmActions

      protected void doPostAlgorithmActions()
      Store the result image in the script runner's image table now that the action execution is finished.
      Overrides:
      doPostAlgorithmActions in class JDialogScriptableBase

    • setGUIFromParams

      protected void setGUIFromParams()
      Set the dialog GUI using the script parameters while running this algorithm as part of a script.
      Specified by:
      setGUIFromParams in class JDialogScriptableBase

    • containsSliceEntry

      private boolean containsSliceEntry(HashMap<Integer,int[]> sliceRenumMap, int slice)
      Whether the slice is assigned to another slice elsewhere in the map

    • storeParamsFromGUI

      protected void storeParamsFromGUI() throws ParserException
      Record the parameters just used to run this algorithm in a script.
      Specified by:
      storeParamsFromGUI in class JDialogScriptableBase
      Throws:
      ParserException - If there is a problem creating/recording the new parameters.

    • init

      private void init()
      Sets up the GUI (panels, buttons, etc) and displays it on the screen.

    • buildBasicTableModel

      private DefaultTableModel buildBasicTableModel()

    • buildTableModel

      private DefaultTableModel buildTableModel()

    • doDeleteRows

      private void doDeleteRows(JTable table)
      Removes the currently selected rows from table.
      Parameters:
      table - the currently used JTable

    • buildUndoTableModel

      private DefaultTableModel buildUndoTableModel(boolean undoSource)

    • setVariables

      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      Returns:
      true if parameters set successfully, false otherwise.

    • getActionMetadata

      public ActionMetadata getActionMetadata()
      Return meta-information about this discoverable action for categorization and labeling purposes.
      Specified by:
      getActionMetadata in interface ActionDiscovery
      Returns:
      Metadata for this action.

    • createInputParameters

      public ParameterTable createInputParameters()
      Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
      Specified by:
      createInputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the inputs of this algorithm.

    • createOutputParameters

      public ParameterTable createOutputParameters()
      Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
      Specified by:
      createOutputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the outputs of this algorithm.

    • getOutputImageName

      public String getOutputImageName(String imageParamName)
      Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
      Specified by:
      getOutputImageName in interface ActionDiscovery
      Parameters:
      imageParamName - The output image parameter label for which to get the image name.
      Returns:
      The image name of the requested output image parameter label.

    • isActionComplete

      public boolean isActionComplete()
      Returns whether the action has successfully completed its execution.
      Specified by:
      isActionComplete in interface ActionDiscovery
      Returns:
      True, if the action is complete. False, if the action failed or is still running.