Package gov.nih.mipav.view.dialogs

Class JDialogSliceAveraging

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogSliceAveraging
All Implemented Interfaces:
AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogSliceAveraging extends JDialogScriptableBase implements AlgorithmInterface
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the source image. The program reduces noise in 3D images by averaging together slices. 3, 5, 7, or all slices can be averaged together. Algorithms are executed in their own thread.
See Also:

  • Field Details

    • serialVersionUID

      private static final long serialVersionUID
      Use serialVersionUID for interoperability.
      See Also:

    • allButton

      private JRadioButton allButton
      DOCUMENT ME!

    • averagingNumber

      private int averagingNumber
      DOCUMENT ME!

    • destExtents

      private int[] destExtents
      DOCUMENT ME!

    • destinationGroup

      private ButtonGroup destinationGroup
      DOCUMENT ME!

    • destinationPanel

      private JPanel destinationPanel
      DOCUMENT ME!

    • displayLoc

      private int displayLoc
      DOCUMENT ME!

    • fiveButton

      private JRadioButton fiveButton
      DOCUMENT ME!

    • image

      private ModelImage image
      DOCUMENT ME!

    • newImage

      private JRadioButton newImage
      DOCUMENT ME!

    • numberGroup

      private ButtonGroup numberGroup
      DOCUMENT ME!

    • optionsPanel

      private JPanel optionsPanel
      DOCUMENT ME!

    • replaceImage

      private JRadioButton replaceImage
      DOCUMENT ME!

    • resultImage

      private ModelImage resultImage
      DOCUMENT ME!

    • sAverAlgo

      private AlgorithmSliceAveraging sAverAlgo
      DOCUMENT ME!

    • sevenButton

      private JRadioButton sevenButton
      DOCUMENT ME!

    • sliceNumber

      private int sliceNumber
      DOCUMENT ME!

    • threeButton

      private JRadioButton threeButton
      DOCUMENT ME!

    • titles

      private String[] titles
      DOCUMENT ME!

    • userInterface

      private ViewUserInterface userInterface
      DOCUMENT ME!

  • Constructor Details

    • JDialogSliceAveraging

      public JDialogSliceAveraging()
      Empty constructor needed for dynamic instantiation (used during scripting).

    • JDialogSliceAveraging

      public JDialogSliceAveraging(Frame theParentFrame, ModelImage im)
      Creates a new JDialogSliceAveraging object.
      Parameters:
      theParentFrame - Parent frame.
      im - Source image.

  • Method Details

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Closes dialog box when the OK button is pressed, sets variables and calls algorithm.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase
      Parameters:
      event - Event that triggers function.

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • getResultImage

      public ModelImage getResultImage()
      Accessor that returns the image.
      Returns:
      The result image.

    • setAveragingNumber

      public void setAveragingNumber(int averagingNumber)
      Accessor that sets the number of slice that will be averaged together.
      Parameters:
      averagingNumber - DOCUMENT ME!

    • setDisplayLocNew

      public void setDisplayLocNew()
      Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.

    • setDisplayLocReplace

      public void setDisplayLocReplace()
      Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.

    • callAlgorithm

      protected void callAlgorithm()
      Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.
      Specified by:
      callAlgorithm in class JDialogScriptableBase

    • doPostAlgorithmActions

      protected void doPostAlgorithmActions()
      Store the result image in the script runner's image table now that the action execution is finished.
      Overrides:
      doPostAlgorithmActions in class JDialogScriptableBase

    • setGUIFromParams

      protected void setGUIFromParams()
      Set the dialog GUI using the script parameters while running this algorithm as part of a script.
      Specified by:
      setGUIFromParams in class JDialogScriptableBase

    • storeParamsFromGUI

      protected void storeParamsFromGUI() throws ParserException
      Record the parameters just used to run this algorithm in a script.
      Specified by:
      storeParamsFromGUI in class JDialogScriptableBase
      Throws:
      ParserException - If there is a problem creating/recording the new parameters.

    • init

      private void init()
      Initializes the GUI by creating the components, placing them in the dialog, and displaying them.

    • setVariables

      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      Returns:
      true if parameters set successfully, false otherwise.