Package gov.nih.mipav.view.dialogs
Class JDialogSWI
java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogSWI
- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,ActionDiscovery,ActionListener,FocusListener,ItemListener,WindowListener,ImageObserver,MenuContainer,Serializable,EventListener,Accessible,RootPaneContainer,WindowConstants
public class JDialogSWI
extends JDialogScriptableBase
implements AlgorithmInterface, ActionDiscovery
This class displays a basic dialog for a MIPAV plug-in. The dialog has been made scriptable,
meaning it can be executed and recorded as part of a script. It implements AlgorithmInterface,
meaning it has methods for listening to and recording the progress of an algorithm.
- Version:
- June 3, 2011
- Author:
- Justin Senseney (SenseneyJ@mail.nih.gov)
- See Also:
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Nested Class Summary
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKActionNested classes/interfaces inherited from class javax.swing.JDialog
JDialog.AccessibleJDialogNested classes/interfaces inherited from class java.awt.Dialog
Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityTypeNested classes/interfaces inherited from class java.awt.Window
Window.AccessibleAWTWindow, Window.TypeNested classes/interfaces inherited from class java.awt.Container
Container.AccessibleAWTContainerNested classes/interfaces inherited from class java.awt.Component
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy -
Field Summary
FieldsModifier and TypeFieldDescriptionprivate booleanThe variable representing whether the blur should be performed.private GuiBuilderprivate ModelImageThis source image is typically set by the constructorprivate ModelImageprivate JComboBoxprivate doubleprivate JTextFieldprivate intprivate JTextFieldprivate JComboBoxprivate ModelImageprivate ModelImageResult image.private Stringprivate booleanprivate JCheckBoxprivate AlgorithmSWIThis is the SWIs algorithmprivate String[]private intprivate JTextFieldprivate intprivate JTextFieldFields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParametersFields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManagerFields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabledFields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPEFields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENTFields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTHFields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE -
Constructor Summary
ConstructorsConstructorDescriptionConstructor used for instantiation during script execution (required for dynamic loading).JDialogSWI(Frame theParentFrame, ModelImage im) Creates new dialog for kidney segmentation from an abdominal cavity image using a plugin. -
Method Summary
Modifier and TypeMethodDescriptionvoidactionPerformed(ActionEvent event) Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented.protected voidOnce all the necessary variables are set, call the kidney segmentation algorithmReturns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voidStore the result image in the script runner's image table now that the action execution is finished.Return meta-information about this discoverable action for categorization and labeling purposes.getOutputImageName(String imageParamName) Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).private voidinit()booleanReturns whether the action has successfully completed its execution.protected voidUsed in turning the plugin into a scriptprivate booleanThis method could ensure everything in your dialog box has been set correctlyprotected voidUsed in turning the plugin into a scriptMethods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setCompleteMethods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpenedMethods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, updateMethods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBackMethods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFrontMethods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTreeMethods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycleMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, waitMethods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRun
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Field Details
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resultImage
Result image. -
image
This source image is typically set by the constructor -
swiAlgo
This is the SWIs algorithm -
doErnst
private boolean doErnstThe variable representing whether the blur should be performed. -
titles
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guiBuilder
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maskThresholdField
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xFilterSizeField
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yFilterSizeField
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maskThreshold
private double maskThreshold -
xFilterSize
private int xFilterSize -
yFilterSize
private int yFilterSize -
magnitudeCombo
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phaseCombo
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showInterImagesBox
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multFactorField
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multFactor
private int multFactor -
magImage
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phaseImage
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showInterImages
private boolean showInterImages -
resultImageName
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Constructor Details
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JDialogSWI
public JDialogSWI()Constructor used for instantiation during script execution (required for dynamic loading). -
JDialogSWI
Creates new dialog for kidney segmentation from an abdominal cavity image using a plugin.- Parameters:
theParentFrame- Parent frame.im- Source image.
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Method Details
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actionPerformed
Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformedin interfaceActionListener- Overrides:
actionPerformedin classJDialogBase- Parameters:
event- Event that triggers function.
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algorithmPerformed
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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callAlgorithm
protected void callAlgorithm()Once all the necessary variables are set, call the kidney segmentation algorithm- Specified by:
callAlgorithmin classJDialogScriptableBase
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doPostAlgorithmActions
protected void doPostAlgorithmActions()Store the result image in the script runner's image table now that the action execution is finished.- Overrides:
doPostAlgorithmActionsin classJDialogScriptableBase
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setGUIFromParams
protected void setGUIFromParams()Used in turning the plugin into a script- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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storeParamsFromGUI
Used in turning the plugin into a script- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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init
private void init() -
setVariables
private boolean setVariables()This method could ensure everything in your dialog box has been set correctly- Returns:
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getActionMetadata
Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
getActionMetadatain interfaceActionDiscovery- Returns:
- Metadata for this action.
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createInputParameters
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
createInputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
createOutputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the outputs of this algorithm.
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getOutputImageName
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
getOutputImageNamein interfaceActionDiscovery- Parameters:
imageParamName- The output image parameter label for which to get the image name.- Returns:
- The image name of the requested output image parameter label.
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isActionComplete
public boolean isActionComplete()Returns whether the action has successfully completed its execution.- Specified by:
isActionCompletein interfaceActionDiscovery- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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