Package gov.nih.mipav.view.dialogs

Class JDialogRemoveSlices

  • All Implemented Interfaces:
    AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants
    public class JDialogRemoveSlices
extends JDialogScriptableBase
implements AlgorithmInterface
    Creates the dialog to remove separate slices in an image. Dialog asks which slices the user wishes to remove; it provides buttons to mark all slices for removal and to de-select any slices from image removal; it gives options to remove or to cancel. Allows 3D or 4D images; 2D images would not make sense with this operation.**(as of 25 Oct, does not yet rename removed slice image when saving)**(as of 1 November, does not yet process the more complicated DICOM images completely.
    Version:
    v0.12 1 Nov 1999 (processes most images)
    Author:
    David Parsons (parsonsd@cbel.cit.nih.gov) (with vast help from M.McAuliffe)
    See Also:
    Serialized Form

    • Nested Class Summary

      • Nested classes/interfaces inherited from class javax.swing.JDialog

        javax.swing.JDialog.AccessibleJDialog

      • Nested classes/interfaces inherited from class java.awt.Dialog

        java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType

      • Nested classes/interfaces inherited from class java.awt.Window

        java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

      • Nested classes/interfaces inherited from class java.awt.Container

        java.awt.Container.AccessibleAWTContainer

      • Nested classes/interfaces inherited from class java.awt.Component

        java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

    • Constructor Summary

      Constructors 
      Constructor Description
      JDialogRemoveSlices()
      Empty constructor needed for dynamic instantiation (used during scripting).
      JDialogRemoveSlices​(java.awt.Frame theParentFrame, ModelImage im)
      Creates new dialog for removing slices.

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void actionPerformed​(java.awt.event.ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      void algorithmPerformed​(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented.
      protected void callAlgorithm()
      Once all the necessary variables are set, call the Remove Slices algorithm based on what type of image this is and whether or not there is a separate destination image.
      protected void doPostAlgorithmActions()
      Store the result image in the script runner's image table now that the action execution is finished.
      ModelImage getResultImage()
      Accessor that returns the image.
      private void init()
      Sets up the GUI (panels, buttons, etc) and displays it on the screen.
      boolean isEvenSelected()
      Returns true if only the even image slices have been selected.
      boolean isOddSelected()
      Returns true if only the odd image slices have been selected.
      boolean isSuccessful()
      Accessor that returns the whether or not the algorithm completed successfully.
      void itemStateChanged​(java.awt.event.ItemEvent event)
      Unchanged.
      void setCheckListRemove​(boolean[] cl)
      Accessor that sets the which slices to remove according to the boolean array paramater.
      void setCheckListRemove​(java.util.Vector<java.lang.String> slices)
      Accessor that sets the which slices to remove according to the vector of strings.
      void setCheckListRemoveEven()
      Sets up so that only even slices will be removed.
      void setCheckListRemoveOdd()
      Sets up so that only odd slices will be removed.
      void setDisplayLocNew()
      Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.
      void setDisplayLocReplace()
      Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.
      void setDontOpenFrame​(boolean dontOpenFrame)
      DOCUMENT ME!
      protected void setGUIFromParams()
      Set the dialog GUI using the script parameters while running this algorithm as part of a script.
      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      protected void storeParamsFromGUI()
      Record the parameters just used to run this algorithm in a script.

      • Methods inherited from class javax.swing.JDialog

        addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

      • Methods inherited from class java.awt.Dialog

        addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

      • Methods inherited from class java.awt.Window

        addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

      • Methods inherited from class java.awt.Container

        add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

      • Methods inherited from class java.awt.Component

        action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

    • Field Detail

      • serialVersionUID

        private static final long serialVersionUID
        Use serialVersionUID for interoperability.
        See Also:
        Constant Field Values

      • checkboxList

        private javax.swing.JCheckBox[] checkboxList
        DOCUMENT ME!

      • checkboxPanel

        private javax.swing.JPanel checkboxPanel
        DOCUMENT ME!

      • checkButton

        private javax.swing.JButton checkButton
        DOCUMENT ME!

      • checkEvenButton

        private javax.swing.JButton checkEvenButton
        DOCUMENT ME!

      • checkListRemove

        private boolean[] checkListRemove
        DOCUMENT ME!

      • checkOddButton

        private javax.swing.JButton checkOddButton
        DOCUMENT ME!

      • destinationGroup

        private javax.swing.ButtonGroup destinationGroup
        DOCUMENT ME!

      • displayLoc

        private int displayLoc
        DOCUMENT ME!

      • dontOpenFrame

        private boolean dontOpenFrame
        DOCUMENT ME!

      • doReplace

        private boolean doReplace
        DOCUMENT ME!

      • exampleLabel

        private javax.swing.JLabel exampleLabel
        DOCUMENT ME!

      • exampleLabel2

        private javax.swing.JLabel exampleLabel2
        DOCUMENT ME!

      • newImage

        private javax.swing.JRadioButton newImage
        DOCUMENT ME!

      • nSlices

        private int nSlices
        DOCUMENT ME!

      • numChecked

        private int numChecked
        DOCUMENT ME!

      • origExtents

        private int[] origExtents
        DOCUMENT ME!

      • origNDims

        private int origNDims
        DOCUMENT ME!

      • pressedCheckEven

        private boolean pressedCheckEven
        DOCUMENT ME!

      • pressedCheckOdd

        private boolean pressedCheckOdd
        DOCUMENT ME!

      • rangeField

        private javax.swing.JTextField rangeField
        DOCUMENT ME!

      • replaceBox

        private javax.swing.JCheckBox replaceBox
        DOCUMENT ME!

      • replaceImage

        private javax.swing.JRadioButton replaceImage
        DOCUMENT ME!

      • resultImage

        private ModelImage resultImage
        DOCUMENT ME!

      • scrollPane

        private javax.swing.JScrollPane scrollPane
        DOCUMENT ME!

      • successful

        private boolean successful
        DOCUMENT ME!

      • titles

        private java.lang.String[] titles
        DOCUMENT ME!

      • unCheckButton

        private javax.swing.JButton unCheckButton
        DOCUMENT ME!

      • useRange

        private javax.swing.JCheckBox useRange
        DOCUMENT ME!

      • insertBlank

        private boolean insertBlank
        If true, insert a blank rather than a weighted average

    • Constructor Detail

      • JDialogRemoveSlices

        public JDialogRemoveSlices()
        Empty constructor needed for dynamic instantiation (used during scripting).

      • JDialogRemoveSlices

        public JDialogRemoveSlices​(java.awt.Frame theParentFrame,
                           ModelImage im)
        Creates new dialog for removing slices.
        Parameters:
        theParentFrame - Parent frame
        im - Source image

    • Method Detail

      • actionPerformed

        public void actionPerformed​(java.awt.event.ActionEvent event)
        Closes dialog box when the OK button is pressed and calls the algorithm.
        Specified by:
        actionPerformed in interface java.awt.event.ActionListener
        Overrides:
        actionPerformed in class JDialogBase
        Parameters:
        event - Event that triggers function

      • algorithmPerformed

        public void algorithmPerformed​(AlgorithmBase algorithm)
        This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
        Specified by:
        algorithmPerformed in interface AlgorithmInterface
        Parameters:
        algorithm - Algorithm that caused the event.

      • getResultImage

        public ModelImage getResultImage()
        Accessor that returns the image.
        Returns:
        the result image

      • setGUIFromParams

        protected void setGUIFromParams()
        Set the dialog GUI using the script parameters while running this algorithm as part of a script.
        Specified by:
        setGUIFromParams in class JDialogScriptableBase

      • doPostAlgorithmActions

        protected void doPostAlgorithmActions()
        Store the result image in the script runner's image table now that the action execution is finished.
        Overrides:
        doPostAlgorithmActions in class JDialogScriptableBase

      • isEvenSelected

        public boolean isEvenSelected()
        Returns true if only the even image slices have been selected.
        Returns:
        true if only even slices selected to be removed, false otherwise

      • isOddSelected

        public boolean isOddSelected()
        Returns true if only the odd image slices have been selected.
        Returns:
        true if only odd slices selected to be removed, false otherwise

      • isSuccessful

        public boolean isSuccessful()
        Accessor that returns the whether or not the algorithm completed successfully.
        Returns:
        DOCUMENT ME!

      • itemStateChanged

        public void itemStateChanged​(java.awt.event.ItemEvent event)
        Unchanged.
        Specified by:
        itemStateChanged in interface java.awt.event.ItemListener
        Overrides:
        itemStateChanged in class JDialogBase
        Parameters:
        event - DOCUMENT ME!

      • setCheckListRemove

        public void setCheckListRemove​(boolean[] cl)
        Accessor that sets the which slices to remove according to the boolean array paramater.
        Parameters:
        cl - for every element that is true, the slice corresponding to that element index will be removed

      • setCheckListRemove

        public void setCheckListRemove​(java.util.Vector<java.lang.String> slices)
        Accessor that sets the which slices to remove according to the vector of strings.
        Parameters:
        slices - - the list of slices to be removed.

      • setCheckListRemoveEven

        public void setCheckListRemoveEven()
        Sets up so that only even slices will be removed.

      • setCheckListRemoveOdd

        public void setCheckListRemoveOdd()
        Sets up so that only odd slices will be removed.

      • setDisplayLocNew

        public void setDisplayLocNew()
        Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.

      • setDisplayLocReplace

        public void setDisplayLocReplace()
        Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.

      • setDontOpenFrame

        public void setDontOpenFrame​(boolean dontOpenFrame)
        DOCUMENT ME!
        Parameters:
        dontOpenFrame - DOCUMENT ME!

      • callAlgorithm

        protected void callAlgorithm()
        Once all the necessary variables are set, call the Remove Slices algorithm based on what type of image this is and whether or not there is a separate destination image.
        Specified by:
        callAlgorithm in class JDialogScriptableBase

      • init

        private void init()
        Sets up the GUI (panels, buttons, etc) and displays it on the screen.

      • setVariables

        private boolean setVariables()
        Use the GUI results to set up the variables needed to run the algorithm.
        Returns:
        true if parameters set successfully, false otherwise.