java.lang.Object
- java.awt.Component
- - java.awt.Container
  - - java.awt.Window
    - - java.awt.Dialog
      - javax.swing.JDialog
        
        gov.nih.mipav.view.dialogs.JDialogBase
        
        gov.nih.mipav.view.dialogs.JDialogScriptableBase
        
        gov.nih.mipav.view.dialogs.JDialogRegistrationOAR2D

All Implemented Interfaces:

AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, ActionDiscovery, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants
```
public class JDialogRegistrationOAR2D
extends JDialogScriptableBase
implements AlgorithmInterface, ActionDiscovery, ScriptableActionInterface
```
Dialog to get user input, then call AlgorithmRegOAR2D.

Author:

Neva Cherniavsky

See Also:

AlgorithmCostFunctions, AlgorithmRegOAR2D, Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
  JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
- Nested classes/interfaces inherited from class javax.swing.JDialog
  javax.swing.JDialog.AccessibleJDialog
- Nested classes/interfaces inherited from class java.awt.Dialog
  java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
- Nested classes/interfaces inherited from class java.awt.Window
  java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
- Nested classes/interfaces inherited from class java.awt.Container
  java.awt.Container.AccessibleAWTContainer
- Nested classes/interfaces inherited from class java.awt.Component
  java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields
Modifier and Type	Field	Description
`private javax.swing.JDialog`	`advancedDialog`	Variables for Advanced Settings dialog.
`private javax.swing.JCheckBox`	`bruteForceCheckBox`	CheckBox to turn brute-force registration on or off:.
`private javax.swing.JDialog`	`bruteForceDialog`	Dialog to set the brute-force registration parameters:.
`private javax.swing.JButton`	`buttonWeightInput`	DOCUMENT ME!
`private javax.swing.JButton`	`buttonWeightRef`	DOCUMENT ME!
`private float`	`coarseRate`	DOCUMENT ME!
`private javax.swing.JTextField`	`coarseRateText`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxCostFunct`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxDOF`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxImage`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxInterp`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxInterp2`	DOCUMENT ME!
`private javax.swing.JComboBox`	`comboBoxSearchAlgo`
`private int`	`cost`	DOCUMENT ME!
`private int`	`dataType`
`private java.lang.String`	`directoryWInput`	DOCUMENT ME!
`private java.lang.String`	`directoryWRef`	DOCUMENT ME!
`private boolean`	`displayTransform`	DOCUMENT ME!
`private boolean`	`doColor`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`doColorCheckBox`	CheckBox to turn color registration on or off:.
`private int`	`DOF`	DOCUMENT ME!
`private boolean`	`doJTEM`
`private boolean`	`doMultiThread`
`private boolean`	`doSubsample`	DOCUMENT ME!
`private int`	`ELSUNC`
`private java.lang.String`	`fileNameWInput`	DOCUMENT ME!
`private java.lang.String`	`fileNameWRef`	DOCUMENT ME!
`private float`	`fillValue`
`private float`	`fineRate`	DOCUMENT ME!
`private javax.swing.JTextField`	`fineRateText`	DOCUMENT ME!
`private double`	`imageMax`
`private double`	`imageMin`
`private ModelImage`	`inputWeightImage`	DOCUMENT ME!
`private int`	`interp`	DOCUMENT ME!
`private int`	`interp2`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`jtemCheckBox`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelCoarse`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelCoarseDegrees`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelFine`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelFineDegrees`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelInterp2`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelRotateDegrees`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelRotateRange`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelRotateRangeTo`	DOCUMENT ME!
`private int`	`LEVENBERG_MARQUARDT`
`private boolean`	`m_bSubsetDialog`	If true the dialog for this instance of JDialogRegistrationOAR2D will not activate the AlgorithmRegOAR2D:.
`private ModelImage`	`matchImage`	DOCUMENT ME!
`private javax.swing.JComboBox`	`matrixComboBox`
`private java.lang.String`	`matrixDirectory`
`private javax.swing.JLabel`	`matrixLabel`
`private int`	`maxIterations`	DOCUMENT ME!
`private int`	`maxIterations_def`	DOCUMENT ME!
`private javax.swing.JTextField`	`maxIterationsText`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`multiThreadCheckBox`
`private int`	`NL2SOL`
`private javax.swing.JRadioButton`	`noneRadio`	DOCUMENT ME!
`private int`	`numMinima`	DOCUMENT ME!
`private int`	`numMinima_def`	DOCUMENT ME!
`private javax.swing.JTextField`	`numMinText`	DOCUMENT ME!
`private javax.swing.JComboBox`	`outOfBoundsComboBox`
`private int`	`outOfBoundsIndex`	Tells how to select fill value for out of bounds data 0 for image minimum 1 for NaN for float, zero otherwise. 2 for user defined 3 for image maximum
`private javax.swing.JLabel`	`outOfBoundsLabel`
`private int`	`POWELL`
`private ModelImage`	`refImage`	DOCUMENT ME!
`private ModelImage`	`refWeightImage`	DOCUMENT ME!
`private AlgorithmRegOAR2D`	`reg2`	DOCUMENT ME!
`private AlgorithmRegELSUNCOAR2D`	`reg2E`
`private ModelImage`	`resultImage`	DOCUMENT ME!
`private float`	`rotateBegin`	DOCUMENT ME!
`private javax.swing.JTextField`	`rotateBeginText`	DOCUMENT ME!
`private float`	`rotateEnd`	DOCUMENT ME!
`private javax.swing.JTextField`	`rotateEndText`	DOCUMENT ME!
`private float`	`rotationBF`	DOCUMENT ME!
`private javax.swing.JTextField`	`rotationText`	Brute-force registration parameters:.
`private javax.swing.JCheckBox`	`sampleCheckBox`	DOCUMENT ME!
`private int`	`scaleStepsBF`	DOCUMENT ME!
`private javax.swing.JTextField`	`scaleStepsText`	Brute-force registration parameters:.
`private int`	`searchAlgorithm`
`private static long`	`serialVersionUID`	Use serialVersionUID for interoperability.
`private javax.swing.JTextField`	`textInput`	DOCUMENT ME!
`private javax.swing.JTextField`	`textRef`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`transformCheckbox`	DOCUMENT ME!
`private int`	`translationBF`	DOCUMENT ME!
`private javax.swing.JTextField`	`translationText`	Brute-force registration parameters:.
`private ViewUserInterface`	`UI`	DOCUMENT ME!
`private javax.swing.JLabel`	`userDirectoryLabel`
`private javax.swing.JTextField`	`userDirectoryText`
`private javax.swing.JLabel`	`valueLabel`
`private javax.swing.JTextField`	`valueText`
`private javax.swing.JRadioButton`	`voiRadio`	DOCUMENT ME!
`private boolean`	`voisOnly`	DOCUMENT ME!
`private boolean`	`weighted`	DOCUMENT ME!
`private javax.swing.JRadioButton`	`weightRadio`	DOCUMENT ME!
`private float`	`xscaleBF`	DOCUMENT ME!
`private javax.swing.JTextField`	`xscaleText`	Brute-force registration parameters:.
`private float`	`yscaleBF`	DOCUMENT ME!
`private javax.swing.JTextField`	`yscaleText`	Brute-force registration parameters:.

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager

Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors
Constructor	Description
`JDialogRegistrationOAR2D()`	Empty constructor needed for dynamic instantiation (used during scripting).
`JDialogRegistrationOAR2D(java.awt.Frame theParentFrame, ModelImage im)`	Creates new dialog for user to choose type of 2D image registration algorithm to run.
`JDialogRegistrationOAR2D(java.awt.Frame theParentFrame, ModelImage ref, ModelImage match, int iCost, int iDOF, int iInterp, float fRotateBegin, float fRotateEnd, float fCoarseRate, float fFineRate, boolean bDoSubsample, int iMaxIterations, int iNumMin, int iInterp2, boolean bDisplayTransform, float fRotateBF, float fXScaleBF, float fYScaleBF, int iScaleStepsBF, int iTranslationBF)`	Creates new dialog for user to choose type of 2D image registration algorithm to run.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`actionPerformed(java.awt.event.ActionEvent event)`	Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.
`void`	`algorithmPerformed(AlgorithmBase algorithm)`	This method is required if the AlgorithmPerformed interface is implemented.
`private javax.swing.JDialog`	`buildAdvancedDialog(int maxIter, int numMinima)`	Build advanced settings dialog.
`private javax.swing.JDialog`	`buildBruteForceDialog()`	Builds the bruteForceDialog so the user can set the brute-force registration parameters:
`private javax.swing.JComboBox`	`buildImgComboBox(ModelImage image)`	Builds a list of images.
`protected void`	`callAlgorithm()`	Calls the algorithm with the set-up parameters.
`ParameterTable`	`createInputParameters()`	Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in `setGUIFromParams()`).
`ParameterTable`	`createOutputParameters()`	Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
`protected void`	`doPostAlgorithmActions()`	Store the result image in the script runner's image table now that the action execution is finished.
`ActionMetadata`	`getActionMetadata()`	Return meta-information about this discoverable action for categorization and labeling purposes.
`boolean`	`getBruteForce()`	Accessor to get whether or not to do the brute-force registration.
`float`	`getCoarseBegin()`	Accessor to get the coarse sample begin.
`float`	`getCoarseEnd()`	Accessor to get the coarse sample end.
`float`	`getCoarseRate()`	Accessor to get the coarse sample rate.
`int`	`getCostChoice()`	Accessor to get the choice of cost function.
`boolean`	`getDisplayTransform()`	Accessor to get the display transform flag.
`int`	`getDOF()`	Accessor to get the degrees of freedom.
`float`	`getFineRate()`	Accessor to get the fine sample rate.
`int`	`getInterp()`	Accessor to get the initial interpolation.
`int`	`getInterp2()`	Accessor to get the final interpolation.
`int`	`getMaxIterations()`	Accessor to get maxIterations.
`int`	`getNumMinima()`	Accessor to get numMinima.
`java.lang.String`	`getOutputImageName(java.lang.String imageParamName)`	Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
`ModelImage`	`getResultImage()`	Accessor to get the result image.
`float`	`getRotationBruteForce()`	Accessor to get the rotation range for brute force registration:
`int`	`getScaleStepsBruteForce()`	Accessor to get the y scale range for brute force registration:
`boolean`	`getSubsample()`	Accessor to get whether or not subsampling occurs.
`int`	`getTranslationBruteForce()`	Accessor to get the translation range for brute force registration:
`float`	`getXScaleBruteForce()`	Accessor to get the x scale range for brute force registration:
`float`	`getYScaleBruteForce()`	Accessor to get the y scale range for brute force registration:
`private void`	`init()`	Initializes the GUI components and displays the dialog.
`private void`	`initPresets()`	Initializes the GUI components, based on the preset values set by the class calling the constructor.
`boolean`	`isActionComplete()`	Returns whether the action has successfully completed its execution.
`void`	`itemStateChanged(java.awt.event.ItemEvent event)`	Changes the interpolation box to enabled or disabled depending on if the transform box is checked or not.
`void`	`setCoarseBegin(float x)`	Accessor to set the coarse sample begin.
`void`	`setCoarseEnd(float x)`	Accessor to set the coarse sample end.
`void`	`setCoarseRate(float x)`	Accessor to set the coarse sample rate.
`void`	`setCostChoice(int x)`	Accessor to set the choice of cost function.
`void`	`setDisplayTransform(boolean flag)`	Accessor to set the display transform flag.
`void`	`setDOF(int x)`	Accessor to set the degrees of freedom.
`void`	`setFillValue(float fillValue)`	Accessor to set intensity value for out of bounds data
`void`	`setFineRate(float x)`	Accessor to set the fine sample rate.
`protected void`	`setGUIFromParams()`	Set the dialog GUI using the script parameters while running this algorithm as part of a script.
`void`	`setInputWeightImage(ModelImage im)`	Accessor to set the input weight image.
`void`	`setInterp(int x)`	Accessor to set the initial interpolation.
`void`	`setInterp2(int x)`	Accessor to set the final interpolation.
`void`	`setMatrixDirectory(java.lang.String matrixDirectory)`	Accessor to set directory in which the matrix file is stored
`void`	`setMultiThread(boolean doMultiThread)`	Accessor to set whether or not powell's algorithm uses multithreading
`void`	`setOutOfBoundsIndex(int outOfBoundsIndex)`	tells how to select fill value for out of bounds data 0 for image minimum 1 for NaN for float, zero otherwise. 2 for user defined 3 for image max
`void`	`setReferenceImage(ModelImage im)`	Accessor to set the reference image.
`void`	`setReferenceWeightImage(ModelImage im)`	Accessor to set the reference weight image.
`void`	`setSearchAlgorithm(int searchAlgorithm)`
`void`	`setSubsample(boolean doSubsample)`	Accessor to set whether or not subsampling occurs.
`private boolean`	`setVariables()`	Sets the variables needed to call the registration algorithm based on the values entered in the dialog.
`void`	`setVoisOnly(boolean flag)`	Accessor to set the VOIs only flag.
`void`	`setWeighted(boolean flag)`	Accessor to set the weighted images flag.
`protected void`	`storeParamsFromGUI()`	Record the parameters just used to run this algorithm in a script.
`private boolean`	`testType(int type, float value)`	Determine if the value is in the image type range and within the float range since AlgorithmTransform does not use double buffers.

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRun

Methods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterface
insertScriptLine, scriptRun

- Field Detail
  - serialVersionUID
```
private static final long serialVersionUID
```
    Use serialVersionUID for interoperability.
    
    See Also:
    
    Constant Field Values
  - POWELL
```
private final int POWELL
```
    See Also:
    
    Constant Field Values
  - ELSUNC
```
private final int ELSUNC
```
    See Also:
    
    Constant Field Values
  - LEVENBERG_MARQUARDT
```
private final int LEVENBERG_MARQUARDT
```
    See Also:
    
    Constant Field Values
  - NL2SOL
```
private final int NL2SOL
```
    See Also:
    
    Constant Field Values
  - searchAlgorithm
```
private int searchAlgorithm
```
  - advancedDialog
```
private javax.swing.JDialog advancedDialog
```
    Variables for Advanced Settings dialog.
  - maxIterationsText
```
private javax.swing.JTextField maxIterationsText
```
    DOCUMENT ME!
  - numMinText
```
private javax.swing.JTextField numMinText
```
    DOCUMENT ME!
  - bruteForceCheckBox
```
private javax.swing.JCheckBox bruteForceCheckBox
```
    CheckBox to turn brute-force registration on or off:.
  - bruteForceDialog
```
private javax.swing.JDialog bruteForceDialog
```
    Dialog to set the brute-force registration parameters:.
  - buttonWeightInput
```
private javax.swing.JButton buttonWeightInput
```
    DOCUMENT ME!
  - buttonWeightRef
```
private javax.swing.JButton buttonWeightRef
```
    DOCUMENT ME!
  - coarseRateText
```
private javax.swing.JTextField coarseRateText
```
    DOCUMENT ME!
  - comboBoxCostFunct
```
private javax.swing.JComboBox comboBoxCostFunct
```
    DOCUMENT ME!
  - comboBoxSearchAlgo
```
private javax.swing.JComboBox comboBoxSearchAlgo
```
  - comboBoxDOF
```
private javax.swing.JComboBox comboBoxDOF
```
    DOCUMENT ME!
  - comboBoxImage
```
private javax.swing.JComboBox comboBoxImage
```
    DOCUMENT ME!
  - comboBoxInterp
```
private javax.swing.JComboBox comboBoxInterp
```
    DOCUMENT ME!
  - comboBoxInterp2
```
private javax.swing.JComboBox comboBoxInterp2
```
    DOCUMENT ME!
  - cost
```
private int cost
```
    DOCUMENT ME!
  - interp
```
private int interp
```
    DOCUMENT ME!
  - interp2
```
private int interp2
```
    DOCUMENT ME!
  - DOF
```
private int DOF
```
    DOCUMENT ME!
  - displayTransform
```
private boolean displayTransform
```
    DOCUMENT ME!
  - doColor
```
private boolean doColor
```
    DOCUMENT ME!
  - doColorCheckBox
```
private javax.swing.JCheckBox doColorCheckBox
```
    CheckBox to turn color registration on or off:.
  - doSubsample
```
private boolean doSubsample
```
    DOCUMENT ME!
  - doJTEM
```
private boolean doJTEM
```
  - doMultiThread
```
private boolean doMultiThread
```
  - fileNameWRef
```
private java.lang.String fileNameWRef
```
    DOCUMENT ME!
  - directoryWRef
```
private java.lang.String directoryWRef
```
    DOCUMENT ME!
  - fileNameWInput
```
private java.lang.String fileNameWInput
```
    DOCUMENT ME!
  - directoryWInput
```
private java.lang.String directoryWInput
```
    DOCUMENT ME!
  - fineRateText
```
private javax.swing.JTextField fineRateText
```
    DOCUMENT ME!
  - inputWeightImage
```
private ModelImage inputWeightImage
```
    DOCUMENT ME!
  - refWeightImage
```
private ModelImage refWeightImage
```
    DOCUMENT ME!
  - labelCoarse
```
private javax.swing.JLabel labelCoarse
```
    DOCUMENT ME!
  - labelCoarseDegrees
```
private javax.swing.JLabel labelCoarseDegrees
```
    DOCUMENT ME!
  - labelFine
```
private javax.swing.JLabel labelFine
```
    DOCUMENT ME!
  - labelFineDegrees
```
private javax.swing.JLabel labelFineDegrees
```
    DOCUMENT ME!
  - labelInterp2
```
private javax.swing.JLabel labelInterp2
```
    DOCUMENT ME!
  - labelRotateDegrees
```
private javax.swing.JLabel labelRotateDegrees
```
    DOCUMENT ME!
  - labelRotateRange
```
private javax.swing.JLabel labelRotateRange
```
    DOCUMENT ME!
  - labelRotateRangeTo
```
private javax.swing.JLabel labelRotateRangeTo
```
    DOCUMENT ME!
  - m_bSubsetDialog
```
private boolean m_bSubsetDialog
```
    If true the dialog for this instance of JDialogRegistrationOAR2D will not activate the AlgorithmRegOAR2D:.
  - matchImage
```
private ModelImage matchImage
```
    DOCUMENT ME!
  - maxIterations_def
```
private int maxIterations_def
```
    DOCUMENT ME!
  - numMinima_def
```
private int numMinima_def
```
    DOCUMENT ME!
  - maxIterations
```
private int maxIterations
```
    DOCUMENT ME!
  - noneRadio
```
private javax.swing.JRadioButton noneRadio
```
    DOCUMENT ME!
  - numMinima
```
private int numMinima
```
    DOCUMENT ME!
  - refImage
```
private ModelImage refImage
```
    DOCUMENT ME!
  - reg2
```
private AlgorithmRegOAR2D reg2
```
    DOCUMENT ME!
  - reg2E
```
private AlgorithmRegELSUNCOAR2D reg2E
```
  - resultImage
```
private ModelImage resultImage
```
    DOCUMENT ME!
  - rotateBegin
```
private float rotateBegin
```
    DOCUMENT ME!
  - rotateEnd
```
private float rotateEnd
```
    DOCUMENT ME!
  - coarseRate
```
private float coarseRate
```
    DOCUMENT ME!
  - fineRate
```
private float fineRate
```
    DOCUMENT ME!
  - rotateBeginText
```
private javax.swing.JTextField rotateBeginText
```
    DOCUMENT ME!
  - rotateEndText
```
private javax.swing.JTextField rotateEndText
```
    DOCUMENT ME!
  - rotationBF
```
private float rotationBF
```
    DOCUMENT ME!
  - xscaleBF
```
private float xscaleBF
```
    DOCUMENT ME!
  - yscaleBF
```
private float yscaleBF
```
    DOCUMENT ME!
  - rotationText
```
private javax.swing.JTextField rotationText
```
    Brute-force registration parameters:.
  - translationText
```
private javax.swing.JTextField translationText
```
    Brute-force registration parameters:.
  - xscaleText
```
private javax.swing.JTextField xscaleText
```
    Brute-force registration parameters:.
  - yscaleText
```
private javax.swing.JTextField yscaleText
```
    Brute-force registration parameters:.
  - scaleStepsText
```
private javax.swing.JTextField scaleStepsText
```
    Brute-force registration parameters:.
  - sampleCheckBox
```
private javax.swing.JCheckBox sampleCheckBox
```
    DOCUMENT ME!
  - jtemCheckBox
```
private javax.swing.JCheckBox jtemCheckBox
```
    DOCUMENT ME!
  - multiThreadCheckBox
```
private javax.swing.JCheckBox multiThreadCheckBox
```
  - scaleStepsBF
```
private int scaleStepsBF
```
    DOCUMENT ME!
  - textInput
```
private javax.swing.JTextField textInput
```
    DOCUMENT ME!
  - textRef
```
private javax.swing.JTextField textRef
```
    DOCUMENT ME!
  - transformCheckbox
```
private javax.swing.JCheckBox transformCheckbox
```
    DOCUMENT ME!
  - translationBF
```
private int translationBF
```
    DOCUMENT ME!
  - UI
```
private ViewUserInterface UI
```
    DOCUMENT ME!
  - voiRadio
```
private javax.swing.JRadioButton voiRadio
```
    DOCUMENT ME!
  - voisOnly
```
private boolean voisOnly
```
    DOCUMENT ME!
  - weighted
```
private boolean weighted
```
    DOCUMENT ME!
  - weightRadio
```
private javax.swing.JRadioButton weightRadio
```
    DOCUMENT ME!
  - outOfBoundsLabel
```
private javax.swing.JLabel outOfBoundsLabel
```
  - outOfBoundsComboBox
```
private javax.swing.JComboBox outOfBoundsComboBox
```
  - valueLabel
```
private javax.swing.JLabel valueLabel
```
  - valueText
```
private javax.swing.JTextField valueText
```
  - imageMin
```
private double imageMin
```
  - imageMax
```
private double imageMax
```
  - dataType
```
private int dataType
```
  - outOfBoundsIndex
```
private int outOfBoundsIndex
```
    Tells how to select fill value for out of bounds data 0 for image minimum 1 for NaN for float, zero otherwise. 2 for user defined 3 for image maximum
  - fillValue
```
private float fillValue
```
  - matrixLabel
```
private javax.swing.JLabel matrixLabel
```
  - matrixComboBox
```
private javax.swing.JComboBox matrixComboBox
```
  - matrixDirectory
```
private java.lang.String matrixDirectory
```
  - userDirectoryLabel
```
private javax.swing.JLabel userDirectoryLabel
```
  - userDirectoryText
```
private javax.swing.JTextField userDirectoryText
```
- Constructor Detail
  - JDialogRegistrationOAR2D
```
public JDialogRegistrationOAR2D()
```
    Empty constructor needed for dynamic instantiation (used during scripting).
  - JDialogRegistrationOAR2D
```
public JDialogRegistrationOAR2D(java.awt.Frame theParentFrame,
                                ModelImage im)
```
    Creates new dialog for user to choose type of 2D image registration algorithm to run.
    
    Parameters:
    
    theParentFrame - Parent frame.
    
    im - Source image.
  - JDialogRegistrationOAR2D
```
public JDialogRegistrationOAR2D(java.awt.Frame theParentFrame,
                                ModelImage ref,
                                ModelImage match,
                                int iCost,
                                int iDOF,
                                int iInterp,
                                float fRotateBegin,
                                float fRotateEnd,
                                float fCoarseRate,
                                float fFineRate,
                                boolean bDoSubsample,
                                int iMaxIterations,
                                int iNumMin,
                                int iInterp2,
                                boolean bDisplayTransform,
                                float fRotateBF,
                                float fXScaleBF,
                                float fYScaleBF,
                                int iScaleStepsBF,
                                int iTranslationBF)
```
    Creates new dialog for user to choose type of 2D image registration algorithm to run.
    
    Parameters:
    
    theParentFrame - Parent frame.
    
    ref - Reference image.
    
    match - Match image.
    
    iCost - default cost choice.
    
    iDOF - default degrees of freedom choice.
    
    iInterp - default image interpolation choice.
    
    fRotateBegin - default rotation range choice.
    
    fRotateEnd - default rotation range choice.
    
    fCoarseRate - default rotation coarse rate choice.
    
    fFineRate - default rotation fine rate choice.
    
    bDoSubsample - default subsampling choice.
    
    iMaxIterations - default max iterations choice.
    
    iNumMin - default number of minima choice.
    
    iInterp2 - default display interpolation choice.
    
    bDisplayTransform - default display transformed image choice.
    
    fRotateBF - default rotation angle range for brute-force registration.
    
    fXScaleBF - default scale in x range for brute-force registration.
    
    fYScaleBF - default scale in x range for brute-force registration.
    
    iScaleStepsBF - default number of steps to divide scale range brute-force registration.
    
    iTranslationBF - default translation range for brute-force registration.
- Method Detail
  - actionPerformed
```
public void actionPerformed(java.awt.event.ActionEvent event)
```
    Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.
    
    Specified by:
    
    actionPerformed in interface java.awt.event.ActionListener
    
    Overrides:
    
    actionPerformed in class JDialogBase
    
    Parameters:
    
    event - Event that triggers function.
  - algorithmPerformed
```
public void algorithmPerformed(AlgorithmBase algorithm)
```
    This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to complete.
    
    Specified by:
    
    algorithmPerformed in interface AlgorithmInterface
    
    Parameters:
    
    algorithm - Algorithm that caused the event.
  - getBruteForce
```
public boolean getBruteForce()
```
    Accessor to get whether or not to do the brute-force registration.
    
    Returns:
    
    bruteForceCheckBox.isSelected()
  - getCoarseBegin
```
public float getCoarseBegin()
```
    Accessor to get the coarse sample begin.
    
    Returns:
    
    rotateBegon Coarse begin
  - getCoarseEnd
```
public float getCoarseEnd()
```
    Accessor to get the coarse sample end.
    
    Returns:
    
    rotateEnd Coarse end
  - getCoarseRate
```
public float getCoarseRate()
```
    Accessor to get the coarse sample rate.
    
    Returns:
    
    coarseRate, Coarse rate
  - getCostChoice
```
public int getCostChoice()
```
    Accessor to get the choice of cost function.
    
    Returns:
    
    cost, Cost function.
  - getDisplayTransform
```
public boolean getDisplayTransform()
```
    Accessor to get the display transform flag.
    
    Returns:
    
    displayTransform flag true means display the transformed image.
  - getDOF
```
public int getDOF()
```
    Accessor to get the degrees of freedom.
    
    Returns:
    
    DOF, Degrees of freedom
  - getFineRate
```
public float getFineRate()
```
    Accessor to get the fine sample rate.
    
    Returns:
    
    fineRate, Fine rate
  - getInterp
```
public int getInterp()
```
    Accessor to get the initial interpolation.
    
    Returns:
    
    interp, Interpolation
  - getInterp2
```
public int getInterp2()
```
    Accessor to get the final interpolation.
    
    Returns:
    
    interp2, Interpolation
  - getMaxIterations
```
public int getMaxIterations()
```
    Accessor to get maxIterations.
    
    Returns:
    
    maxIterations
  - getNumMinima
```
public int getNumMinima()
```
    Accessor to get numMinima.
    
    Returns:
    
    numMinima
  - getResultImage
```
public ModelImage getResultImage()
```
    Accessor to get the result image.
    
    Returns:
    
    Result image.
  - getRotationBruteForce
```
public float getRotationBruteForce()
```
    Accessor to get the rotation range for brute force registration:
    
    Returns:
    
    rotationBF, range of rotations
  - getScaleStepsBruteForce
```
public int getScaleStepsBruteForce()
```
    Accessor to get the y scale range for brute force registration:
    
    Returns:
    
    scaleStepsBF, number of divisions for scale
  - getSubsample
```
public boolean getSubsample()
```
    Accessor to get whether or not subsampling occurs.
    
    Returns:
    
    doSubsample
  - getTranslationBruteForce
```
public int getTranslationBruteForce()
```
    Accessor to get the translation range for brute force registration:
    
    Returns:
    
    translationBF, range of x,y translations
  - getXScaleBruteForce
```
public float getXScaleBruteForce()
```
    Accessor to get the x scale range for brute force registration:
    
    Returns:
    
    xscaleBF, range of scales in x
  - getYScaleBruteForce
```
public float getYScaleBruteForce()
```
    Accessor to get the y scale range for brute force registration:
    
    Returns:
    
    yscaleBF, range of scales in y
  - itemStateChanged
```
public void itemStateChanged(java.awt.event.ItemEvent event)
```
    Changes the interpolation box to enabled or disabled depending on if the transform box is checked or not.
    
    Specified by:
    
    itemStateChanged in interface java.awt.event.ItemListener
    
    Overrides:
    
    itemStateChanged in class JDialogBase
    
    Parameters:
    
    event - Event that triggered this function.
  - setCoarseBegin
```
public void setCoarseBegin(float x)
```
    Accessor to set the coarse sample begin.
    
    Parameters:
    
    x - Coarse begin
  - setCoarseEnd
```
public void setCoarseEnd(float x)
```
    Accessor to set the coarse sample end.
    
    Parameters:
    
    x - Coarse end
  - setCoarseRate
```
public void setCoarseRate(float x)
```
    Accessor to set the coarse sample rate.
    
    Parameters:
    
    x - Coarse rate
  - setCostChoice
```
public void setCostChoice(int x)
```
    Accessor to set the choice of cost function.
    
    Parameters:
    
    x - Cost function.
  - setDisplayTransform
```
public void setDisplayTransform(boolean flag)
```
    Accessor to set the display transform flag.
    
    Parameters:
    
    flag - true means display the transformed image.
  - setDOF
```
public void setDOF(int x)
```
    Accessor to set the degrees of freedom.
    
    Parameters:
    
    x - Degrees of freedom
  - setFineRate
```
public void setFineRate(float x)
```
    Accessor to set the fine sample rate.
    
    Parameters:
    
    x - Fine rate
  - setInputWeightImage
```
public void setInputWeightImage(ModelImage im)
```
    Accessor to set the input weight image.
    
    Parameters:
    
    im - Input weight image.
  - setInterp
```
public void setInterp(int x)
```
    Accessor to set the initial interpolation.
    
    Parameters:
    
    x - Interpolation
  - setInterp2
```
public void setInterp2(int x)
```
    Accessor to set the final interpolation.
    
    Parameters:
    
    x - Interpolation
  - setReferenceImage
```
public void setReferenceImage(ModelImage im)
```
    Accessor to set the reference image.
    
    Parameters:
    
    im - Reference image.
  - setReferenceWeightImage
```
public void setReferenceWeightImage(ModelImage im)
```
    Accessor to set the reference weight image.
    
    Parameters:
    
    im - Reference weight image.
  - setSubsample
```
public void setSubsample(boolean doSubsample)
```
    Accessor to set whether or not subsampling occurs.
    
    Parameters:
    
    doSubsample - DOCUMENT ME!
  - setSearchAlgorithm
```
public void setSearchAlgorithm(int searchAlgorithm)
```
    Parameters:
    
    searchAlgorithm -
  - setMultiThread
```
public void setMultiThread(boolean doMultiThread)
```
    Accessor to set whether or not powell's algorithm uses multithreading
    
    Parameters:
    
    doMultiThread -
  - setVoisOnly
```
public void setVoisOnly(boolean flag)
```
    Accessor to set the VOIs only flag.
    
    Parameters:
    
    flag - true then only register the parts of the images in the VOIs.
  - setWeighted
```
public void setWeighted(boolean flag)
```
    Accessor to set the weighted images flag.
    
    Parameters:
    
    flag - true means there are weighted images.
  - setOutOfBoundsIndex
```
public void setOutOfBoundsIndex(int outOfBoundsIndex)
```
    tells how to select fill value for out of bounds data 0 for image minimum 1 for NaN for float, zero otherwise. 2 for user defined 3 for image max
    
    Parameters:
    
    outOfBoundsIndex -
  - setFillValue
```
public void setFillValue(float fillValue)
```
    Accessor to set intensity value for out of bounds data
    
    Parameters:
    
    fillValue -
  - setMatrixDirectory
```
public void setMatrixDirectory(java.lang.String matrixDirectory)
```
    Accessor to set directory in which the matrix file is stored
    
    Parameters:
    
    matrixDirectory -
  - callAlgorithm
```
protected void callAlgorithm()
```
    Calls the algorithm with the set-up parameters.
    
    Specified by:
    
    callAlgorithm in class JDialogScriptableBase
  - doPostAlgorithmActions
```
protected void doPostAlgorithmActions()
```
    Store the result image in the script runner's image table now that the action execution is finished.
    
    Overrides:
    
    doPostAlgorithmActions in class JDialogScriptableBase
  - setGUIFromParams
```
protected void setGUIFromParams()
```
    Set the dialog GUI using the script parameters while running this algorithm as part of a script.
    
    Specified by:
    
    setGUIFromParams in class JDialogScriptableBase
  - storeParamsFromGUI
```
protected void storeParamsFromGUI()
                           throws ParserException
```
    Record the parameters just used to run this algorithm in a script.
    
    Specified by:
    
    storeParamsFromGUI in class JDialogScriptableBase
    
    Throws:
    
    ParserException - If there is a problem creating/recording the new parameters.
  - buildAdvancedDialog
```
private javax.swing.JDialog buildAdvancedDialog(int maxIter,
                                                int numMinima)
```
    Build advanced settings dialog. Returns JDialog.
    
    Parameters:
    
    maxIter - DOCUMENT ME!
    
    numMinima - DOCUMENT ME!
    
    Returns:
    
    DOCUMENT ME!
  - buildBruteForceDialog
```
private javax.swing.JDialog buildBruteForceDialog()
```
    Builds the bruteForceDialog so the user can set the brute-force registration parameters:
    
    Returns:
    
    bruteForceDialog
  - buildImgComboBox
```
private javax.swing.JComboBox buildImgComboBox(ModelImage image)
```
    Builds a list of images. Returns combobox.
    
    Parameters:
    
    image - DOCUMENT ME!
    
    Returns:
    
    Newly created combo box.
  - init
```
private void init()
```
    Initializes the GUI components and displays the dialog.
  - initPresets
```
private void initPresets()
```
    Initializes the GUI components, based on the preset values set by the class calling the constructor. Then displays the dialog.
  - setVariables
```
private boolean setVariables()
```
    Sets the variables needed to call the registration algorithm based on the values entered in the dialog.
    
    Returns:
    
    true if the variables are properly set, false otherwise.
  - testType
```
private boolean testType(int type,
                         float value)
```
    Determine if the value is in the image type range and within the float range since AlgorithmTransform does not use double buffers.
    
    Parameters:
    
    type - image type
    
    value - value tested
    
    Returns:
    
    true if value is within acceptable range
  - getActionMetadata
```
public ActionMetadata getActionMetadata()
```
    Return meta-information about this discoverable action for categorization and labeling purposes.
    
    Specified by:
    
    getActionMetadata in interface ActionDiscovery
    
    Returns:
    
    Metadata for this action.
  - createInputParameters
```
public ParameterTable createInputParameters()
```
    Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
    
    Specified by:
    
    createInputParameters in interface ActionDiscovery
    
    Returns:
    
    A parameter table listing the inputs of this algorithm.
  - createOutputParameters
```
public ParameterTable createOutputParameters()
```
    Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
    
    Specified by:
    
    createOutputParameters in interface ActionDiscovery
    
    Returns:
    
    A parameter table listing the outputs of this algorithm.
  - getOutputImageName
```
public java.lang.String getOutputImageName(java.lang.String imageParamName)
```
    Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
    
    Specified by:
    
    getOutputImageName in interface ActionDiscovery
    
    Parameters:
    
    imageParamName - The output image parameter label for which to get the image name.
    
    Returns:
    
    The image name of the requested output image parameter label.
  - isActionComplete
```
public boolean isActionComplete()
```
    Returns whether the action has successfully completed its execution.
    
    Specified by:
    
    isActionComplete in interface ActionDiscovery
    
    Returns:
    
    True, if the action is complete. False, if the action failed or is still running.

Class JDialogRegistrationOAR2D

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Nested classes/interfaces inherited from class javax.swing.JDialog

Nested classes/interfaces inherited from class java.awt.Dialog

Nested classes/interfaces inherited from class java.awt.Window

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Field Summary

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Fields inherited from class javax.swing.JDialog

Fields inherited from class java.awt.Dialog

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Fields inherited from interface javax.swing.WindowConstants

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Methods inherited from class javax.swing.JDialog

Methods inherited from class java.awt.Dialog

Methods inherited from class java.awt.Window

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery

Methods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterface

Field Detail

serialVersionUID

POWELL

ELSUNC

LEVENBERG_MARQUARDT

NL2SOL

searchAlgorithm

advancedDialog

maxIterationsText

numMinText

bruteForceCheckBox

bruteForceDialog

buttonWeightInput

buttonWeightRef

coarseRateText

comboBoxCostFunct

comboBoxSearchAlgo

comboBoxDOF

comboBoxImage

comboBoxInterp

comboBoxInterp2

cost

interp

interp2

DOF

displayTransform

doColor

doColorCheckBox

doSubsample

doJTEM

doMultiThread

fileNameWRef

directoryWRef

fileNameWInput

directoryWInput

fineRateText

inputWeightImage

refWeightImage

labelCoarse

labelCoarseDegrees

labelFine

labelFineDegrees

labelInterp2

labelRotateDegrees

labelRotateRange

labelRotateRangeTo

m_bSubsetDialog

matchImage

maxIterations_def

numMinima_def

maxIterations

noneRadio