Package gov.nih.mipav.view.dialogs
Class JDialogNoise
- java.lang.Object
- 
- java.awt.Component
- 
- java.awt.Container
- 
- java.awt.Window
- 
- java.awt.Dialog
- 
- javax.swing.JDialog
- 
- gov.nih.mipav.view.dialogs.JDialogBase
- 
- gov.nih.mipav.view.dialogs.JDialogScriptableBase
- 
- gov.nih.mipav.view.dialogs.JDialogNoise
 
 
 
 
 
 
 
 
- 
- All Implemented Interfaces:
- AlgorithmInterface,- ScriptableActionInterface,- DialogDefaultsInterface,- ActionDiscovery,- java.awt.event.ActionListener,- java.awt.event.FocusListener,- java.awt.event.ItemListener,- java.awt.event.WindowListener,- java.awt.image.ImageObserver,- java.awt.MenuContainer,- java.io.Serializable,- java.util.EventListener,- javax.accessibility.Accessible,- javax.swing.RootPaneContainer,- javax.swing.WindowConstants
 
 public class JDialogNoise extends JDialogScriptableBase implements AlgorithmInterface, java.awt.event.ItemListener, ActionDiscovery, ScriptableActionInterface DOCUMENT ME!- Version:
- 2.0 July 28, 2008
- Author:
- GAUSSIAN and UNIFORM, Matthew J. McAuliffe, Ph.D. POISSON William Gandler
- See Also:
- Serialized Form
 
- 
- 
Nested Class Summary- 
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBaseJDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
 - 
Nested classes/interfaces inherited from class javax.swing.JDialogjavax.swing.JDialog.AccessibleJDialog
 - 
Nested classes/interfaces inherited from class java.awt.Dialogjava.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
 - 
Nested classes/interfaces inherited from class java.awt.Windowjava.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
 
- 
 - 
Field SummaryFields Modifier and Type Field Description private javax.swing.ButtonGroupdestinationGroupDOCUMENT ME!private javax.swing.JPaneldestinationPanelDOCUMENT ME!private intdisplayLocDOCUMENT ME!private doublegainprivate javax.swing.JTextFieldgainTextstatic intGAUSSIANDOCUMENT ME!private javax.swing.ButtonGroupgroup1DOCUMENT ME!private ModelImageimageDOCUMENT ME!private javax.swing.JLabelimageRangeLabelDOCUMENT ME!private doublemaxDOCUMENT ME!private doublemaximumNoiseDOCUMENT ME!private javax.swing.JLabelmaxNoiseLabelDOCUMENT ME!private javax.swing.JLabelmaxNoiseLabel2private doublemeanprivate javax.swing.JTextFieldmeanTextprivate doubleminDOCUMENT ME!private javax.swing.JRadioButtonnewImageDOCUMENT ME!private intnoiseTypeDOCUMENT ME!private doubleoffsetprivate javax.swing.JTextFieldoffsetTextprivate javax.swing.JPanelpanelGUDOCUMENT ME!private javax.swing.JPanelpanelImageTypeDOCUMENT ME!private javax.swing.JPanelpanelPOprivate javax.swing.JPanelpanelRayleighprivate javax.swing.JPanelpanelRicianstatic intPOISSONprivate javax.swing.JRadioButtonradioGaussianDOCUMENT ME!private javax.swing.JRadioButtonradioPoissonprivate javax.swing.JRadioButtonradioRayleighprivate javax.swing.JRadioButtonradioRicianprivate javax.swing.JRadioButtonradioUniformDOCUMENT ME!private AlgorithmNoiserandomAlgoDOCUMENT ME!static intRAYLEIGHprivate javax.swing.JRadioButtonreplaceImageDOCUMENT ME!private ModelImageresultImageDOCUMENT ME!static intRICIANprivate static longserialVersionUIDUse serialVersionUID for interoperability.private doublesigmaprivate javax.swing.JTextFieldsigmaTextprivate javax.swing.JTextFieldtextMaxNoiseDOCUMENT ME!private javax.swing.JTextFieldtextMaxNoise2private java.lang.String[]titlesDOCUMENT ME!static intUNIFORMDOCUMENT ME!private ViewUserInterfaceuserInterfaceDOCUMENT ME!- 
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasedisplayInNewFrame, isComplete, scriptParameters
 - 
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBaseapplyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
 - 
Fields inherited from class javax.swing.JDialogaccessibleContext, rootPane, rootPaneCheckingEnabled
 - 
Fields inherited from class java.awt.ComponentBOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
 
- 
 - 
Constructor SummaryConstructors Constructor Description JDialogNoise()Empty constructor needed for dynamic instantiation (used during scripting).JDialogNoise(java.awt.Frame theParentFrame, ModelImage _image)Constructor.
 - 
Method SummaryAll Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)actionPerformed - closes dialog box when the OK button is pressed and sets the variables.voidalgorithmPerformed(AlgorithmBase algorithm)algorithmPerformed - this method is required if the AlgorithmPerformed interface is implemented.protected voidcallAlgorithm()Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.ParameterTablecreateInputParameters()Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).ParameterTablecreateOutputParameters()Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voiddoPostAlgorithmActions()Store the result image in the script runner's image table now that the action execution is finished.ActionMetadatagetActionMetadata()Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.StringgetOutputImageName(java.lang.String imageParamName)Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).ModelImagegetResultImage()Accessor that returns the image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.booleanisActionComplete()Returns whether the action has successfully completed its execution.voidsetDisplayLocNew()Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.voidsetDisplayLocReplace()Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.voidsetGain(double gain)protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetMean(double mean)voidsetNoiseLevel(double n)Accessor that sets the noise level.voidsetNoiseType(int n)Accessor that sets the noise type.voidsetOffset(double offset)voidsetSigma(double sigma)private booleansetVariables()Use the GUI results to set up the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.- 
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasegetDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
 - 
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBasebuildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
 - 
Methods inherited from class javax.swing.JDialogaddImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
 - 
Methods inherited from class java.awt.DialogaddNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
 - 
Methods inherited from class java.awt.WindowaddPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
 - 
Methods inherited from class java.awt.Containeradd, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
 - 
Methods inherited from class java.awt.Componentaction, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
 - 
Methods inherited from class java.lang.Objectclone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 - 
Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscoveryscriptRun
 - 
Methods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterfaceinsertScriptLine, scriptRun
 
- 
 
- 
- 
- 
Field Detail- 
serialVersionUIDprivate static final long serialVersionUID Use serialVersionUID for interoperability.- See Also:
- Constant Field Values
 
 - 
GAUSSIANpublic static final int GAUSSIAN DOCUMENT ME!- See Also:
- Constant Field Values
 
 - 
POISSONpublic static final int POISSON - See Also:
- Constant Field Values
 
 - 
UNIFORMpublic static final int UNIFORM DOCUMENT ME!- See Also:
- Constant Field Values
 
 - 
RAYLEIGHpublic static final int RAYLEIGH - See Also:
- Constant Field Values
 
 - 
RICIANpublic static final int RICIAN - See Also:
- Constant Field Values
 
 - 
destinationGroupprivate javax.swing.ButtonGroup destinationGroup DOCUMENT ME!
 - 
destinationPanelprivate javax.swing.JPanel destinationPanel DOCUMENT ME!
 - 
displayLocprivate int displayLoc DOCUMENT ME!
 - 
group1private javax.swing.ButtonGroup group1 DOCUMENT ME!
 - 
imageprivate ModelImage image DOCUMENT ME!
 - 
imageRangeLabelprivate javax.swing.JLabel imageRangeLabel DOCUMENT ME!
 - 
maximumNoiseprivate double maximumNoise DOCUMENT ME!
 - 
minprivate double min DOCUMENT ME!
 - 
maxprivate double max DOCUMENT ME!
 - 
newImageprivate javax.swing.JRadioButton newImage DOCUMENT ME!
 - 
noiseTypeprivate int noiseType DOCUMENT ME!
 - 
panelImageTypeprivate javax.swing.JPanel panelImageType DOCUMENT ME!
 - 
panelGUprivate javax.swing.JPanel panelGU DOCUMENT ME!
 - 
panelPOprivate javax.swing.JPanel panelPO 
 - 
panelRayleighprivate javax.swing.JPanel panelRayleigh 
 - 
panelRicianprivate javax.swing.JPanel panelRician 
 - 
radioGaussianprivate javax.swing.JRadioButton radioGaussian DOCUMENT ME!
 - 
radioUniformprivate javax.swing.JRadioButton radioUniform DOCUMENT ME!
 - 
radioPoissonprivate javax.swing.JRadioButton radioPoisson 
 - 
radioRayleighprivate javax.swing.JRadioButton radioRayleigh 
 - 
radioRicianprivate javax.swing.JRadioButton radioRician 
 - 
randomAlgoprivate AlgorithmNoise randomAlgo DOCUMENT ME!
 - 
replaceImageprivate javax.swing.JRadioButton replaceImage DOCUMENT ME!
 - 
resultImageprivate ModelImage resultImage DOCUMENT ME!
 - 
maxNoiseLabelprivate javax.swing.JLabel maxNoiseLabel DOCUMENT ME!
 - 
maxNoiseLabel2private javax.swing.JLabel maxNoiseLabel2 
 - 
meanTextprivate javax.swing.JTextField meanText 
 - 
meanprivate double mean 
 - 
gainTextprivate javax.swing.JTextField gainText 
 - 
gainprivate double gain 
 - 
offsetTextprivate javax.swing.JTextField offsetText 
 - 
offsetprivate double offset 
 - 
textMaxNoiseprivate javax.swing.JTextField textMaxNoise DOCUMENT ME!
 - 
textMaxNoise2private javax.swing.JTextField textMaxNoise2 
 - 
titlesprivate java.lang.String[] titles DOCUMENT ME!
 - 
userInterfaceprivate ViewUserInterface userInterface DOCUMENT ME!
 - 
sigmaTextprivate javax.swing.JTextField sigmaText 
 - 
sigmaprivate double sigma 
 
- 
 - 
Constructor Detail- 
JDialogNoisepublic JDialogNoise() Empty constructor needed for dynamic instantiation (used during scripting).
 - 
JDialogNoisepublic JDialogNoise(java.awt.Frame theParentFrame, ModelImage _image)Constructor.- Parameters:
- theParentFrame- parent frame
- _image- title of dialog frame
 
 
- 
 - 
Method Detail- 
actionPerformedpublic void actionPerformed(java.awt.event.ActionEvent event) actionPerformed - closes dialog box when the OK button is pressed and sets the variables.- Specified by:
- actionPerformedin interface- java.awt.event.ActionListener
- Overrides:
- actionPerformedin class- JDialogBase
- Parameters:
- event- event that triggers this function
 
 - 
algorithmPerformedpublic void algorithmPerformed(AlgorithmBase algorithm) algorithmPerformed - this method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
- algorithmPerformedin interface- AlgorithmInterface
- Parameters:
- algorithm- algorithm that caused the event.
 
 - 
getResultImagepublic ModelImage getResultImage() Accessor that returns the image.- Returns:
- The result image.
 
 - 
setDisplayLocNewpublic void setDisplayLocNew() Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.
 - 
setDisplayLocReplacepublic void setDisplayLocReplace() Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.
 - 
setNoiseLevelpublic void setNoiseLevel(double n) Accessor that sets the noise level.- Parameters:
- n- maximum noise excursion above and below zero
 
 - 
setNoiseTypepublic void setNoiseType(int n) Accessor that sets the noise type.- Parameters:
- n- noise level
 
 - 
setMeanpublic void setMean(double mean) - Parameters:
- mean-
 
 - 
setGainpublic void setGain(double gain) - Parameters:
- gain-
 
 - 
setOffsetpublic void setOffset(double offset) - Parameters:
- offset-
 
 - 
setSigmapublic void setSigma(double sigma) 
 - 
callAlgorithmprotected void callAlgorithm() Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
- callAlgorithmin class- JDialogScriptableBase
 
 - 
doPostAlgorithmActionsprotected void doPostAlgorithmActions() Store the result image in the script runner's image table now that the action execution is finished.- Overrides:
- doPostAlgorithmActionsin class- JDialogScriptableBase
 
 - 
setGUIFromParamsprotected void setGUIFromParams() Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
- setGUIFromParamsin class- JDialogScriptableBase
 
 - 
storeParamsFromGUIprotected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
- storeParamsFromGUIin class- JDialogScriptableBase
- Throws:
- ParserException- If there is a problem creating/recording the new parameters.
 
 - 
initprivate void init() Sets up the GUI (panels, buttons, etc) and displays it on the screen.
 - 
setVariablesprivate boolean setVariables() Use the GUI results to set up the variables needed to run the algorithm.- Returns:
- trueif parameters set successfully,- falseotherwise.
 
 - 
getActionMetadatapublic ActionMetadata getActionMetadata() Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
- getActionMetadatain interface- ActionDiscovery
- Returns:
- Metadata for this action.
 
 - 
createInputParameterspublic ParameterTable createInputParameters() Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
- createInputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the inputs of this algorithm.
 
 - 
createOutputParameterspublic ParameterTable createOutputParameters() Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
- createOutputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the outputs of this algorithm.
 
 - 
getOutputImageNamepublic java.lang.String getOutputImageName(java.lang.String imageParamName) Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
- getOutputImageNamein interface- ActionDiscovery
- Parameters:
- imageParamName- The output image parameter label for which to get the image name.
- Returns:
- The image name of the requested output image parameter label.
 
 - 
isActionCompletepublic boolean isActionComplete() Returns whether the action has successfully completed its execution.- Specified by:
- isActionCompletein interface- ActionDiscovery
- Returns:
- True, if the action is complete. False, if the action failed or is still running.
 
 
- 
 
-