Package gov.nih.mipav.view.dialogs
Class JDialogMeanShiftSegmentation
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogMeanShiftSegmentation
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- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,java.awt.event.ActionListener,java.awt.event.FocusListener,java.awt.event.ItemListener,java.awt.event.WindowListener,java.awt.image.ImageObserver,java.awt.MenuContainer,java.io.Serializable,java.util.EventListener,javax.accessibility.Accessible,javax.swing.RootPaneContainer,javax.swing.WindowConstants
public class JDialogMeanShiftSegmentation extends JDialogScriptableBase implements AlgorithmInterface
- See Also:
- Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private javax.swing.JCheckBoxboundariesCheckBoxprivate ModelImageboundariesImageprivate booleancreateBoundariesImageprivate booleancreateFilteredImageprivate intdisplayLocprivate javax.swing.JCheckBoxfilterCheckBoxprivate ModelImagefilteredImageprivate javax.swing.JRadioButtonhighSpeedUpButtonprivate ModelImageimageprivate booleanisRangeUniformprivate booleanisSpatialUniformprivate booleanmeasureTimeprivate javax.swing.JCheckBoxmeasureTimeCheckBoxprivate javax.swing.JRadioButtonmediumSpeedUpButtonprivate intminRegionprivate javax.swing.JTextFieldminRegionTextprivate AlgorithmMeanShiftSegmentationmsAlgoprivate javax.swing.JRadioButtonnewImageprivate javax.swing.JRadioButtonnoSpeedUpButtonprivate floatrangeBandwidthprivate javax.swing.JRadioButtonrangeGaussianButtonprivate javax.swing.ButtonGrouprangeGroupprivate AlgorithmMeanShiftSegmentation.kernelTyperangeKernelTypeprivate javax.swing.JTextFieldrangeTextprivate javax.swing.JRadioButtonrangeUniformButtonprivate javax.swing.JRadioButtonreplaceImageprivate ModelImageresultImageprivate floatspatialBandwidthprivate javax.swing.JRadioButtonspatialGaussianButtonprivate javax.swing.ButtonGroupspatialGroupprivate AlgorithmMeanShiftSegmentation.kernelTypespatialKernelTypeprivate javax.swing.JTextFieldspatialTextprivate javax.swing.JRadioButtonspatialUniformButtonprivate intspeedIntprivate doublespeedThresholdprivate javax.swing.JLabelspeedThresholdLabelprivate javax.swing.JTextFieldspeedThresholdTextprivate javax.swing.ButtonGroupspeedUpGroupprivate AlgorithmMeanShiftSegmentation.SpeedUpLevelspeedUpLevelprivate java.lang.String[]titlesprivate ViewUserInterfaceuserInterfaceprivate double[]weightMapprivate booleanweightMapDefined-
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogMeanShiftSegmentation()Empty constructor needed for dynamic instantiation (used during scripting).JDialogMeanShiftSegmentation(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog for entering parameters for mean shift segmentation.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)actionPerformed - Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.protected voidcallAlgorithm()Once all the necessary variables are set, call the Mean Shift Segmentation algorithm based on what type of image this is and whether or not there is a separate destination image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.voidsetDisplayLocNew()Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.voidsetDisplayLocReplace()Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.private booleansetVariables()Use the GUI results to set up the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.-
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
doPostAlgorithmActions, getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Field Detail
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displayLoc
private int displayLoc
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image
private ModelImage image
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userInterface
private ViewUserInterface userInterface
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msAlgo
private AlgorithmMeanShiftSegmentation msAlgo
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resultImage
private ModelImage resultImage
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titles
private java.lang.String[] titles
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spatialKernelType
private AlgorithmMeanShiftSegmentation.kernelType spatialKernelType
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rangeKernelType
private AlgorithmMeanShiftSegmentation.kernelType rangeKernelType
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spatialBandwidth
private float spatialBandwidth
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rangeBandwidth
private float rangeBandwidth
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minRegion
private int minRegion
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speedUpLevel
private AlgorithmMeanShiftSegmentation.SpeedUpLevel speedUpLevel
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measureTime
private boolean measureTime
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speedThreshold
private double speedThreshold
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weightMap
private double[] weightMap
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weightMapDefined
private boolean weightMapDefined
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spatialGroup
private javax.swing.ButtonGroup spatialGroup
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spatialUniformButton
private javax.swing.JRadioButton spatialUniformButton
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spatialGaussianButton
private javax.swing.JRadioButton spatialGaussianButton
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rangeGroup
private javax.swing.ButtonGroup rangeGroup
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rangeUniformButton
private javax.swing.JRadioButton rangeUniformButton
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rangeGaussianButton
private javax.swing.JRadioButton rangeGaussianButton
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spatialText
private javax.swing.JTextField spatialText
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rangeText
private javax.swing.JTextField rangeText
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minRegionText
private javax.swing.JTextField minRegionText
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speedUpGroup
private javax.swing.ButtonGroup speedUpGroup
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noSpeedUpButton
private javax.swing.JRadioButton noSpeedUpButton
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mediumSpeedUpButton
private javax.swing.JRadioButton mediumSpeedUpButton
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highSpeedUpButton
private javax.swing.JRadioButton highSpeedUpButton
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speedThresholdLabel
private javax.swing.JLabel speedThresholdLabel
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speedThresholdText
private javax.swing.JTextField speedThresholdText
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measureTimeCheckBox
private javax.swing.JCheckBox measureTimeCheckBox
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isSpatialUniform
private boolean isSpatialUniform
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isRangeUniform
private boolean isRangeUniform
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speedInt
private int speedInt
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newImage
private javax.swing.JRadioButton newImage
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replaceImage
private javax.swing.JRadioButton replaceImage
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createFilteredImage
private boolean createFilteredImage
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filteredImage
private ModelImage filteredImage
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filterCheckBox
private javax.swing.JCheckBox filterCheckBox
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createBoundariesImage
private boolean createBoundariesImage
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boundariesImage
private ModelImage boundariesImage
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boundariesCheckBox
private javax.swing.JCheckBox boundariesCheckBox
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Constructor Detail
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JDialogMeanShiftSegmentation
public JDialogMeanShiftSegmentation()
Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogMeanShiftSegmentation
public JDialogMeanShiftSegmentation(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog for entering parameters for mean shift segmentation.- Parameters:
theParentFrame- Parent frameim- Source image
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Method Detail
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init
private void init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.
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actionPerformed
public void actionPerformed(java.awt.event.ActionEvent event)
actionPerformed - Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformedin interfacejava.awt.event.ActionListener- Overrides:
actionPerformedin classJDialogBase- Parameters:
event- event that triggers function
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setVariables
private boolean setVariables()
Use the GUI results to set up the variables needed to run the algorithm.- Returns:
trueif parameters set successfully,falseotherwise.
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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callAlgorithm
protected void callAlgorithm()
Once all the necessary variables are set, call the Mean Shift Segmentation algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithmin classJDialogScriptableBase
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setDisplayLocNew
public void setDisplayLocNew()
Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.
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setDisplayLocReplace
public void setDisplayLocReplace()
Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.
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setGUIFromParams
protected void setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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storeParamsFromGUI
protected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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