Package gov.nih.mipav.view.dialogs
Class JDialogMeanShiftSegmentation
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogMeanShiftSegmentation
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- All Implemented Interfaces:
AlgorithmInterface
,ScriptableActionInterface
,DialogDefaultsInterface
,java.awt.event.ActionListener
,java.awt.event.FocusListener
,java.awt.event.ItemListener
,java.awt.event.WindowListener
,java.awt.image.ImageObserver
,java.awt.MenuContainer
,java.io.Serializable
,java.util.EventListener
,javax.accessibility.Accessible
,javax.swing.RootPaneContainer
,javax.swing.WindowConstants
public class JDialogMeanShiftSegmentation extends JDialogScriptableBase implements AlgorithmInterface
- See Also:
- Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private javax.swing.JCheckBox
boundariesCheckBox
private ModelImage
boundariesImage
private boolean
createBoundariesImage
private boolean
createFilteredImage
private int
displayLoc
private javax.swing.JCheckBox
filterCheckBox
private ModelImage
filteredImage
private javax.swing.JRadioButton
highSpeedUpButton
private ModelImage
image
private boolean
isRangeUniform
private boolean
isSpatialUniform
private boolean
measureTime
private javax.swing.JCheckBox
measureTimeCheckBox
private javax.swing.JRadioButton
mediumSpeedUpButton
private int
minRegion
private javax.swing.JTextField
minRegionText
private AlgorithmMeanShiftSegmentation
msAlgo
private javax.swing.JRadioButton
newImage
private javax.swing.JRadioButton
noSpeedUpButton
private float
rangeBandwidth
private javax.swing.JRadioButton
rangeGaussianButton
private javax.swing.ButtonGroup
rangeGroup
private AlgorithmMeanShiftSegmentation.kernelType
rangeKernelType
private javax.swing.JTextField
rangeText
private javax.swing.JRadioButton
rangeUniformButton
private javax.swing.JRadioButton
replaceImage
private ModelImage
resultImage
private float
spatialBandwidth
private javax.swing.JRadioButton
spatialGaussianButton
private javax.swing.ButtonGroup
spatialGroup
private AlgorithmMeanShiftSegmentation.kernelType
spatialKernelType
private javax.swing.JTextField
spatialText
private javax.swing.JRadioButton
spatialUniformButton
private int
speedInt
private double
speedThreshold
private javax.swing.JLabel
speedThresholdLabel
private javax.swing.JTextField
speedThresholdText
private javax.swing.ButtonGroup
speedUpGroup
private AlgorithmMeanShiftSegmentation.SpeedUpLevel
speedUpLevel
private java.lang.String[]
titles
private ViewUserInterface
userInterface
private double[]
weightMap
private boolean
weightMapDefined
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogMeanShiftSegmentation()
Empty constructor needed for dynamic instantiation (used during scripting).JDialogMeanShiftSegmentation(java.awt.Frame theParentFrame, ModelImage im)
Creates new dialog for entering parameters for mean shift segmentation.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
actionPerformed(java.awt.event.ActionEvent event)
actionPerformed - Closes dialog box when the OK button is pressed and calls the algorithm.void
algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented.protected void
callAlgorithm()
Once all the necessary variables are set, call the Mean Shift Segmentation algorithm based on what type of image this is and whether or not there is a separate destination image.private void
init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.void
setDisplayLocNew()
Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.void
setDisplayLocReplace()
Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.protected void
setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.private boolean
setVariables()
Use the GUI results to set up the variables needed to run the algorithm.protected void
storeParamsFromGUI()
Record the parameters just used to run this algorithm in a script.-
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
doPostAlgorithmActions, getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Field Detail
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displayLoc
private int displayLoc
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image
private ModelImage image
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userInterface
private ViewUserInterface userInterface
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msAlgo
private AlgorithmMeanShiftSegmentation msAlgo
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resultImage
private ModelImage resultImage
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titles
private java.lang.String[] titles
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spatialKernelType
private AlgorithmMeanShiftSegmentation.kernelType spatialKernelType
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rangeKernelType
private AlgorithmMeanShiftSegmentation.kernelType rangeKernelType
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spatialBandwidth
private float spatialBandwidth
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rangeBandwidth
private float rangeBandwidth
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minRegion
private int minRegion
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speedUpLevel
private AlgorithmMeanShiftSegmentation.SpeedUpLevel speedUpLevel
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measureTime
private boolean measureTime
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speedThreshold
private double speedThreshold
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weightMap
private double[] weightMap
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weightMapDefined
private boolean weightMapDefined
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spatialGroup
private javax.swing.ButtonGroup spatialGroup
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spatialUniformButton
private javax.swing.JRadioButton spatialUniformButton
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spatialGaussianButton
private javax.swing.JRadioButton spatialGaussianButton
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rangeGroup
private javax.swing.ButtonGroup rangeGroup
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rangeUniformButton
private javax.swing.JRadioButton rangeUniformButton
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rangeGaussianButton
private javax.swing.JRadioButton rangeGaussianButton
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spatialText
private javax.swing.JTextField spatialText
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rangeText
private javax.swing.JTextField rangeText
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minRegionText
private javax.swing.JTextField minRegionText
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speedUpGroup
private javax.swing.ButtonGroup speedUpGroup
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noSpeedUpButton
private javax.swing.JRadioButton noSpeedUpButton
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mediumSpeedUpButton
private javax.swing.JRadioButton mediumSpeedUpButton
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highSpeedUpButton
private javax.swing.JRadioButton highSpeedUpButton
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speedThresholdLabel
private javax.swing.JLabel speedThresholdLabel
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speedThresholdText
private javax.swing.JTextField speedThresholdText
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measureTimeCheckBox
private javax.swing.JCheckBox measureTimeCheckBox
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isSpatialUniform
private boolean isSpatialUniform
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isRangeUniform
private boolean isRangeUniform
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speedInt
private int speedInt
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newImage
private javax.swing.JRadioButton newImage
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replaceImage
private javax.swing.JRadioButton replaceImage
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createFilteredImage
private boolean createFilteredImage
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filteredImage
private ModelImage filteredImage
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filterCheckBox
private javax.swing.JCheckBox filterCheckBox
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createBoundariesImage
private boolean createBoundariesImage
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boundariesImage
private ModelImage boundariesImage
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boundariesCheckBox
private javax.swing.JCheckBox boundariesCheckBox
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Constructor Detail
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JDialogMeanShiftSegmentation
public JDialogMeanShiftSegmentation()
Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogMeanShiftSegmentation
public JDialogMeanShiftSegmentation(java.awt.Frame theParentFrame, ModelImage im)
Creates new dialog for entering parameters for mean shift segmentation.- Parameters:
theParentFrame
- Parent frameim
- Source image
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Method Detail
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init
private void init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.
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actionPerformed
public void actionPerformed(java.awt.event.ActionEvent event)
actionPerformed - Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformed
in interfacejava.awt.event.ActionListener
- Overrides:
actionPerformed
in classJDialogBase
- Parameters:
event
- event that triggers function
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setVariables
private boolean setVariables()
Use the GUI results to set up the variables needed to run the algorithm.- Returns:
true
if parameters set successfully,false
otherwise.
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformed
in interfaceAlgorithmInterface
- Parameters:
algorithm
- Algorithm that caused the event.
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callAlgorithm
protected void callAlgorithm()
Once all the necessary variables are set, call the Mean Shift Segmentation algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithm
in classJDialogScriptableBase
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setDisplayLocNew
public void setDisplayLocNew()
Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.
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setDisplayLocReplace
public void setDisplayLocReplace()
Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.
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setGUIFromParams
protected void setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParams
in classJDialogScriptableBase
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storeParamsFromGUI
protected void storeParamsFromGUI() throws ParserException
Record the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUI
in classJDialogScriptableBase
- Throws:
ParserException
- If there is a problem creating/recording the new parameters.
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