Package gov.nih.mipav.view.dialogs
Class JDialogHistogram2Dim
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogHistogram2Dim
 
 
 
 
 
 
 
 
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- All Implemented Interfaces:
- AlgorithmInterface,- ScriptableActionInterface,- DialogDefaultsInterface,- java.awt.event.ActionListener,- java.awt.event.FocusListener,- java.awt.event.ItemListener,- java.awt.event.WindowListener,- java.awt.image.ImageObserver,- java.awt.MenuContainer,- java.io.Serializable,- java.util.EventListener,- javax.accessibility.Accessible,- javax.swing.RootPaneContainer,- javax.swing.WindowConstants
 
 public class JDialogHistogram2Dim extends JDialogScriptableBase implements AlgorithmInterface Dialog to get user input Create 2D histogram of images with equal dimensions or 2D histograms with 2 colors inside a RGB image. Algorithms are executed in their own thread.- See Also:
- Serialized Form
 
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Nested Class Summary- 
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBaseJDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialogjavax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialogjava.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Windowjava.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
 
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Field SummaryFields Modifier and Type Field Description private intbin1Number of bins for first image.private booleanbin1DefaultDefault number of bins for first image.private javax.swing.JLabelbin1LabelLabel description for bin1.private javax.swing.JTextFieldbin1TextTextfield for bin1.private intbin2Number of bins for second image.private booleanbin2DefaultDefault number of bins for first image.private javax.swing.JLabelbin2LabelLabel description for bin1.private javax.swing.JTextFieldbin2TextTextfield for bin2.private javax.swing.JCheckBoxblueCheckBoxCheckbox to select blue image.private intcolorsPresentNumber of colors present.private booleandoLinearRescaleIf true, the range of second image is same as the range of the first image.private booleandoLogResultIf true, calculates the log of the result image for better visualization.private ModelImagefirstImageFirst image (Source image).private javax.swing.JCheckBoxgreenCheckBoxCheckbox to select green image.private AlgorithmHistogram2Dimhistogram2DimAlgoInstance of AlgorithmHistogram2Dim.private javax.swing.JComboBoximageComboBoxCombobox to select the second image.private javax.swing.JLabellabelImageImage label.private javax.swing.JCheckBoxlinearCheckboxCheckbox to select linear rescaling of second image.private doublemaxBMax intensity values in Red, Green and Blue images respectively.private doublemaxGMax intensity values in Red, Green and Blue images respectively.private doublemaxRMax intensity values in Red, Green and Blue images respectively.private doubleminBMin. intensity values in Red, Green and Blue images respectivelyprivate doubleminGMin. intensity values in Red, Green and Blue images respectivelyprivate doubleminRMin. intensity values in Red, Green and Blue images respectivelyprivate doublepossibleInt2ValuesPossible intensity values for second image.private doublepossibleIntValuesPossible intensity values for first image.private javax.swing.JCheckBoxredCheckBoxCheckbox to select Red image.private javax.swing.JCheckBoxresultCheckboxCheckbox to display the log of result image.private ModelImageresultImageImage where the result is stored.private ModelImagesecondImageSecond image (Base image).private static longserialVersionUIDUse serialVersionUID for interoperability.private java.lang.String[]titlesString titles for the new windows.private booleanuseBlueIf true, blue image is selected as of the two images for calculating histogram.private booleanuseGreenIf true, green image is selected as of the two images for calculating histogram.private booleanuseRedIf true, red image is selected as of the two images for calculating histogram.private ViewUserInterfaceuserInterfaceKeeps record of the present structure of the application.- 
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasedisplayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBaseapplyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialogaccessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.ComponentBOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
 
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Constructor SummaryConstructors Constructor Description JDialogHistogram2Dim()Empty constructor needed for dynamic instantiation (used during scripting).JDialogHistogram2Dim(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog.
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Method SummaryAll Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.private javax.swing.JComboBoxbuildComboBox(ModelImage image)Builds a list of images.protected voidcallAlgorithm()DOCUMENT ME!protected voiddoPostAlgorithmActions()Store the result image in the script runner's image table now that the action execution is finished.ModelImagegetResultImage()Accessor that returns the image.private voidinit()Initializes GUI components and displays dialog.voiditemStateChanged(java.awt.event.ItemEvent event)itemStateChanged.voidsetBin1(int bin1)Accessor that sets bin1.voidsetBin1Default(boolean bin1Default)DOCUMENT ME!voidsetBin2(int bin2)Accessor that sets bin2.voidsetBin2Default(boolean bin2Default)DOCUMENT ME!voidsetDoLinearRescale(boolean doLinearRescale)Accessor that sets whether or not linear rescaling occurs.voidsetDoLogResult(boolean doLogResult)Accessor that sets whether or not log of result image is displayed.protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetSecondImage(ModelImage secondImage)Accessor to set the secondImage.voidsetUseBlue(boolean useBlue)Accessor that setes if the blue channel is used.voidsetUseGreen(boolean useGreen)Accessor that sets if the green channel is used.voidsetUseRed(boolean useRed)Accessor that sets if the red channel is used.private booleansetVariables()Use the GUI results to set up the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.- 
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasegetDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBasebuildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialogaddImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.DialogaddNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.WindowaddPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Containeradd, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Componentaction, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
 
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Field Detail- 
serialVersionUIDprivate static final long serialVersionUID Use serialVersionUID for interoperability.- See Also:
- Constant Field Values
 
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bin1private int bin1 Number of bins for first image.
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bin1Defaultprivate boolean bin1Default Default number of bins for first image. Default is 256.
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bin1Labelprivate javax.swing.JLabel bin1Label Label description for bin1.
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bin1Textprivate javax.swing.JTextField bin1Text Textfield for bin1.
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bin2private int bin2 Number of bins for second image.
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bin2Defaultprivate boolean bin2Default Default number of bins for first image. Default is 256.
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bin2Labelprivate javax.swing.JLabel bin2Label Label description for bin1.
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bin2Textprivate javax.swing.JTextField bin2Text Textfield for bin2.
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blueCheckBoxprivate javax.swing.JCheckBox blueCheckBox Checkbox to select blue image.
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colorsPresentprivate int colorsPresent Number of colors present.
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doLinearRescaleprivate boolean doLinearRescale If true, the range of second image is same as the range of the first image.
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doLogResultprivate boolean doLogResult If true, calculates the log of the result image for better visualization.
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firstImageprivate ModelImage firstImage First image (Source image).
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greenCheckBoxprivate javax.swing.JCheckBox greenCheckBox Checkbox to select green image.
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histogram2DimAlgoprivate AlgorithmHistogram2Dim histogram2DimAlgo Instance of AlgorithmHistogram2Dim.
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imageComboBoxprivate javax.swing.JComboBox imageComboBox Combobox to select the second image.
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labelImageprivate javax.swing.JLabel labelImage Image label.
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linearCheckboxprivate javax.swing.JCheckBox linearCheckbox Checkbox to select linear rescaling of second image.
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maxRprivate double maxR Max intensity values in Red, Green and Blue images respectively.
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maxGprivate double maxG Max intensity values in Red, Green and Blue images respectively.
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maxBprivate double maxB Max intensity values in Red, Green and Blue images respectively.
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minRprivate double minR Min. intensity values in Red, Green and Blue images respectively
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minGprivate double minG Min. intensity values in Red, Green and Blue images respectively
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minBprivate double minB Min. intensity values in Red, Green and Blue images respectively
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possibleInt2Valuesprivate double possibleInt2Values Possible intensity values for second image.
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possibleIntValuesprivate double possibleIntValues Possible intensity values for first image.
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redCheckBoxprivate javax.swing.JCheckBox redCheckBox Checkbox to select Red image.
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resultCheckboxprivate javax.swing.JCheckBox resultCheckbox Checkbox to display the log of result image.
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resultImageprivate ModelImage resultImage Image where the result is stored.
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secondImageprivate ModelImage secondImage Second image (Base image).
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titlesprivate java.lang.String[] titles String titles for the new windows.
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useBlueprivate boolean useBlue If true, blue image is selected as of the two images for calculating histogram.
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useGreenprivate boolean useGreen If true, green image is selected as of the two images for calculating histogram.
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useRedprivate boolean useRed If true, red image is selected as of the two images for calculating histogram.
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userInterfaceprivate ViewUserInterface userInterface Keeps record of the present structure of the application.
 
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Constructor Detail- 
JDialogHistogram2Dimpublic JDialogHistogram2Dim() Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogHistogram2Dimpublic JDialogHistogram2Dim(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog.- Parameters:
- theParentFrame- Parent frame
- im- Source image
 
 
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Method Detail- 
actionPerformedpublic void actionPerformed(java.awt.event.ActionEvent event) Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
- actionPerformedin interface- java.awt.event.ActionListener
- Overrides:
- actionPerformedin class- JDialogBase
- Parameters:
- event- Event that triggers function.
 
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algorithmPerformedpublic void algorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
- algorithmPerformedin interface- AlgorithmInterface
- Parameters:
- algorithm- Algorithm that caused the event.
 
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getResultImagepublic ModelImage getResultImage() Accessor that returns the image.- Returns:
- The result image.
 
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itemStateChangedpublic void itemStateChanged(java.awt.event.ItemEvent event) itemStateChanged.- Specified by:
- itemStateChangedin interface- java.awt.event.ItemListener
- Overrides:
- itemStateChangedin class- JDialogBase
- Parameters:
- event- DOCUMENT ME!
 
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setBin1public void setBin1(int bin1) Accessor that sets bin1.- Parameters:
- bin1- DOCUMENT ME!
 
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setBin1Defaultpublic void setBin1Default(boolean bin1Default) DOCUMENT ME!- Parameters:
- bin1Default- DOCUMENT ME!
 
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setBin2public void setBin2(int bin2) Accessor that sets bin2.- Parameters:
- bin2- DOCUMENT ME!
 
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setBin2Defaultpublic void setBin2Default(boolean bin2Default) DOCUMENT ME!- Parameters:
- bin2Default- DOCUMENT ME!
 
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setDoLinearRescalepublic void setDoLinearRescale(boolean doLinearRescale) Accessor that sets whether or not linear rescaling occurs.- Parameters:
- doLinearRescale- DOCUMENT ME!
 
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setDoLogResultpublic void setDoLogResult(boolean doLogResult) Accessor that sets whether or not log of result image is displayed.- Parameters:
- doLogResult- If true, displays the log of result image for better visualization
 
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setSecondImagepublic void setSecondImage(ModelImage secondImage) Accessor to set the secondImage.- Parameters:
- secondImage- DOCUMENT ME!
 
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setUseBluepublic void setUseBlue(boolean useBlue) Accessor that setes if the blue channel is used.- Parameters:
- useBlue- DOCUMENT ME!
 
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setUseGreenpublic void setUseGreen(boolean useGreen) Accessor that sets if the green channel is used.- Parameters:
- useGreen- DOCUMENT ME!
 
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setUseRedpublic void setUseRed(boolean useRed) Accessor that sets if the red channel is used.- Parameters:
- useRed- DOCUMENT ME!
 
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callAlgorithmprotected void callAlgorithm() DOCUMENT ME!- Specified by:
- callAlgorithmin class- JDialogScriptableBase
 
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doPostAlgorithmActionsprotected void doPostAlgorithmActions() Store the result image in the script runner's image table now that the action execution is finished.- Overrides:
- doPostAlgorithmActionsin class- JDialogScriptableBase
 
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setGUIFromParamsprotected void setGUIFromParams() Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
- setGUIFromParamsin class- JDialogScriptableBase
 
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storeParamsFromGUIprotected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
- storeParamsFromGUIin class- JDialogScriptableBase
- Throws:
- ParserException- If there is a problem creating/recording the new parameters.
 
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buildComboBoxprivate javax.swing.JComboBox buildComboBox(ModelImage image) Builds a list of images. Returns combobox. List must be all color or all black and white.- Parameters:
- image- DOCUMENT ME!
- Returns:
- Newly created combo box.
 
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initprivate void init() Initializes GUI components and displays dialog.
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setVariablesprivate boolean setVariables() Use the GUI results to set up the variables needed to run the algorithm.- Returns:
- trueif parameters set successfully,- falseotherwise.
 
 
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