Package gov.nih.mipav.view.dialogs
Class JDialogFuzzyMinimization
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogFuzzyMinimization
 
 
 
 
 
 
 
 
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- All Implemented Interfaces:
- AlgorithmInterface,- ScriptableActionInterface,- DialogDefaultsInterface,- ActionDiscovery,- java.awt.event.ActionListener,- java.awt.event.FocusListener,- java.awt.event.ItemListener,- java.awt.event.WindowListener,- java.awt.image.ImageObserver,- java.awt.MenuContainer,- java.io.Serializable,- java.util.EventListener,- javax.accessibility.Accessible,- javax.swing.RootPaneContainer,- javax.swing.WindowConstants
 
 public class JDialogFuzzyMinimization extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery, ScriptableActionInterface Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the source image. In addition the user can select having the algorithm applied to whole image or to the VOI regions. It should be noted that the algorithms are executed in their own thread.- Version:
- 1.0; 17 February 2000
- See Also:
- Serialized Form
 
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Nested Class Summary- 
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBaseJDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialogjavax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialogjava.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Windowjava.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
 
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Field SummaryFields Modifier and Type Field Description private doublecrossValprivate doubleexpFuzzifierDOCUMENT ME!private AlgorithmFuzzyMinimizationfuzzyMinAlgoprivate doublegmaxprivate doublegminprivate ModelImageimageDOCUMENT ME!private intitersDOCUMENT ME!private javax.swing.JLabellabelCrossprivate javax.swing.JLabellabelExpFuzzifierDOCUMENT ME!private javax.swing.JLabellabelgmaxprivate javax.swing.JLabellabelgminprivate doublemaxValprivate doubleminValprivate JPanelAlgorithmOutputOptionsoutputPanelDOCUMENT ME!private ModelImageresultImageDOCUMENT ME!private javax.swing.JTextFieldtextCrossprivate javax.swing.JTextFieldtextExpFuzzifierDOCUMENT ME!private javax.swing.JTextFieldtextgmaxprivate javax.swing.JTextFieldtextgminprivate javax.swing.JTextFieldtextNIterDOCUMENT ME!private java.lang.String[]titlesDOCUMENT ME!private ViewUserInterfaceuserInterfaceDOCUMENT ME!- 
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasedisplayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBaseapplyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialogaccessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.ComponentBOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
 
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Constructor SummaryConstructors Constructor Description JDialogFuzzyMinimization()Empty constructor needed for dynamic instantiation (used during scripting).JDialogFuzzyMinimization(java.awt.Frame theParentFrame, ModelImage im)Creates a new JDialogFuzzyMinimization object.
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Method SummaryAll Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.protected voidcallAlgorithm()Once all the necessary variables are set, call the median algorithm based on what type of image this is and whether or not there is a separate destination image.ParameterTablecreateInputParameters()Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).ParameterTablecreateOutputParameters()Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voiddoPostAlgorithmActions()Store the result image in the script runner's image table now that the action execution is finished.ActionMetadatagetActionMetadata()Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.StringgetOutputImageName(java.lang.String imageParamName)Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).ModelImagegetResultImage()Accessor that returns the image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.booleanisActionComplete()Returns whether the action has successfully completed its execution.voidsetCrossoverValue(double crossVal)Accessor that sets the crossover value at which the membership function = 0.5voidsetExpFuzzifier(double expFuzzifier)Accessor that sets the exponential fuzzifier.voidsetgmax(double gmax)voidsetgmin(double gmin)protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetIters(int num)Accessor that sets the number of iterations.private booleansetVariables()Use the GUI results to set up the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.- 
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasegetDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBasebuildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialogaddImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.DialogaddNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.WindowaddPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Containeradd, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Componentaction, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Methods inherited from class java.lang.Objectclone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscoveryscriptRun
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Methods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterfaceinsertScriptLine, scriptRun
 
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Field Detail- 
imageprivate ModelImage image DOCUMENT ME!
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itersprivate int iters DOCUMENT ME!
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labelExpFuzzifierprivate javax.swing.JLabel labelExpFuzzifier DOCUMENT ME!
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fuzzyMinAlgoprivate AlgorithmFuzzyMinimization fuzzyMinAlgo 
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outputPanelprivate JPanelAlgorithmOutputOptions outputPanel DOCUMENT ME!
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resultImageprivate ModelImage resultImage DOCUMENT ME!
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expFuzzifierprivate double expFuzzifier DOCUMENT ME!
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textNIterprivate javax.swing.JTextField textNIter DOCUMENT ME!
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textExpFuzzifierprivate javax.swing.JTextField textExpFuzzifier DOCUMENT ME!
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titlesprivate java.lang.String[] titles DOCUMENT ME!
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userInterfaceprivate ViewUserInterface userInterface DOCUMENT ME!
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minValprivate double minVal 
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maxValprivate double maxVal 
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labelCrossprivate javax.swing.JLabel labelCross 
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textCrossprivate javax.swing.JTextField textCross 
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crossValprivate double crossVal 
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labelgminprivate javax.swing.JLabel labelgmin 
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textgminprivate javax.swing.JTextField textgmin 
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gminprivate double gmin 
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labelgmaxprivate javax.swing.JLabel labelgmax 
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textgmaxprivate javax.swing.JTextField textgmax 
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gmaxprivate double gmax 
 
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Constructor Detail- 
JDialogFuzzyMinimizationpublic JDialogFuzzyMinimization() Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogFuzzyMinimizationpublic JDialogFuzzyMinimization(java.awt.Frame theParentFrame, ModelImage im)Creates a new JDialogFuzzyMinimization object.- Parameters:
- theParentFrame- Parent frame.
- im- Source image.
 
 
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Method Detail- 
actionPerformedpublic void actionPerformed(java.awt.event.ActionEvent event) Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
- actionPerformedin interface- java.awt.event.ActionListener
- Overrides:
- actionPerformedin class- JDialogBase
- Parameters:
- event- Event that triggers function.
 
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algorithmPerformedpublic void algorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
- algorithmPerformedin interface- AlgorithmInterface
- Parameters:
- algorithm- Algorithm that caused the event.
 
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getResultImagepublic ModelImage getResultImage() Accessor that returns the image.- Returns:
- The result image.
 
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setIterspublic void setIters(int num) Accessor that sets the number of iterations.- Parameters:
- num- Value to set iterations to (should be between 1 and 20).
 
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setCrossoverValuepublic void setCrossoverValue(double crossVal) Accessor that sets the crossover value at which the membership function = 0.5- Parameters:
- crossVal-
 
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setgminpublic void setgmin(double gmin) - Parameters:
- gmin-
 
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setgmaxpublic void setgmax(double gmax) - Parameters:
- gmax-
 
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setExpFuzzifierpublic void setExpFuzzifier(double expFuzzifier) Accessor that sets the exponential fuzzifier.- Parameters:
- dev- Value to set the exponential fuzzifier to (should be between 1.0 and 2.0).
 
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callAlgorithmprotected void callAlgorithm() Once all the necessary variables are set, call the median algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
- callAlgorithmin class- JDialogScriptableBase
 
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doPostAlgorithmActionsprotected void doPostAlgorithmActions() Store the result image in the script runner's image table now that the action execution is finished.- Overrides:
- doPostAlgorithmActionsin class- JDialogScriptableBase
 
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setGUIFromParamsprotected void setGUIFromParams() Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
- setGUIFromParamsin class- JDialogScriptableBase
 
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storeParamsFromGUIprotected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
- storeParamsFromGUIin class- JDialogScriptableBase
- Throws:
- ParserException- If there is a problem creating/recording the new parameters.
 
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initprivate void init() Sets up the GUI (panels, buttons, etc) and displays it on the screen.
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setVariablesprivate boolean setVariables() Use the GUI results to set up the variables needed to run the algorithm.- Returns:
- trueif parameters set successfully,- falseotherwise.
 
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getActionMetadatapublic ActionMetadata getActionMetadata() Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
- getActionMetadatain interface- ActionDiscovery
- Returns:
- Metadata for this action.
 
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createInputParameterspublic ParameterTable createInputParameters() Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
- createInputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the inputs of this algorithm.
 
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createOutputParameterspublic ParameterTable createOutputParameters() Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
- createOutputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the outputs of this algorithm.
 
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getOutputImageNamepublic java.lang.String getOutputImageName(java.lang.String imageParamName) Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
- getOutputImageNamein interface- ActionDiscovery
- Parameters:
- imageParamName- The output image parameter label for which to get the image name.
- Returns:
- The image name of the requested output image parameter label.
 
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isActionCompletepublic boolean isActionComplete() Returns whether the action has successfully completed its execution.- Specified by:
- isActionCompletein interface- ActionDiscovery
- Returns:
- True, if the action is complete. False, if the action failed or is still running.
 
 
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