Package gov.nih.mipav.view.dialogs

Class JDialogFacetModel

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogFacetModel
All Implemented Interfaces:
AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, ActionDiscovery, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogFacetModel extends JDialogScriptableBase implements AlgorithmInterface, ItemListener, ActionDiscovery, ScriptableActionInterface
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the source image. It should be noted that the algorithms are executed in their own threads.
Version:
1.0 April 15, 2016
Author:
William Gandler
See Also:

  • Field Details

    • FACET_BASED_PEAK_NOISE_REMOVAL

      public static final int FACET_BASED_PEAK_NOISE_REMOVAL
      Use serialVersionUID for interoperability.
      See Also:

    • ITERATED_FACET_MODEL

      public static final int ITERATED_FACET_MODEL
      See Also:

    • GRADIENT_BASED_FACET_EDGE_DETECTION

      public static final int GRADIENT_BASED_FACET_EDGE_DETECTION
      See Also:

    • ZERO_CROSSING_EDGE_DETECTOR

      public static final int ZERO_CROSSING_EDGE_DETECTOR
      See Also:

    • INTEGRATED_DIRECTIONAL_DERIVATIVE_ANGLE

      public static final int INTEGRATED_DIRECTIONAL_DERIVATIVE_ANGLE
      See Also:

    • INTEGRATED_DIRECTIONAL_DERIVATIVE_MAGNITUDE

      public static final int INTEGRATED_DIRECTIONAL_DERIVATIVE_MAGNITUDE
      See Also:

    • CORNER_DETECTOR

      public static final int CORNER_DETECTOR
      See Also:

    • blockSide

      private int blockSide

    • alpha

      private double alpha

    • routine

      private int routine

    • gradientDirectionThreshold

      private double gradientDirectionThreshold

    • gradientEdge

      private JRadioButton gradientEdge

    • labelAlpha

      private JLabel labelAlpha

    • textAlpha

      private JTextField textAlpha

    • zeroDetector

      private JRadioButton zeroDetector

    • integratedAngle

      private JRadioButton integratedAngle
      DOCUMENT ME!

    • integratedMagnitude

      private JRadioButton integratedMagnitude

    • cornerDetector

      private JRadioButton cornerDetector

    • labelThreshold

      private JLabel labelThreshold

    • textThreshold

      private JTextField textThreshold

    • algoGroup

      private ButtonGroup algoGroup
      DOCUMENT ME!

    • algoPanel

      private JPanel algoPanel
      DOCUMENT ME!

    • destinationGroup

      private ButtonGroup destinationGroup
      DOCUMENT ME!

    • destinationPanel

      private JPanel destinationPanel
      DOCUMENT ME!

    • displayLoc

      private int displayLoc
      DOCUMENT ME!

    • maskPanel

      private JPanel maskPanel
      DOCUMENT ME!

    • mask3

      private JRadioButton mask3

    • mask5

      private JRadioButton mask5

    • mask7

      private JRadioButton mask7

    • mask9

      private JRadioButton mask9

    • mask11

      private JRadioButton mask11

    • mask13

      private JRadioButton mask13

    • maskGroup

      private ButtonGroup maskGroup
      DOCUMENT ME!

    • facetAlgo

      private AlgorithmFacetModel facetAlgo
      DOCUMENT ME!

    • iteratedModel

      private JRadioButton iteratedModel
      DOCUMENT ME!

    • image

      private ModelImage image
      DOCUMENT ME!

    • mainPanel

      private JPanel mainPanel
      DOCUMENT ME!

    • newImage

      private JRadioButton newImage
      DOCUMENT ME!

    • replaceImage

      private JRadioButton replaceImage
      DOCUMENT ME!

    • resultImage

      private ModelImage resultImage
      DOCUMENT ME!

    • titles

      private String[] titles
      DOCUMENT ME!

    • userInterface

      private ViewUserInterface userInterface
      DOCUMENT ME!

    • noiseRemoval

      private JRadioButton noiseRemoval
      DOCUMENT ME!

  • Constructor Details

    • JDialogFacetModel

      public JDialogFacetModel()
      Empty constructor needed for dynamic instantiation (used during scripting).

    • JDialogFacetModel

      public JDialogFacetModel(ModelImage im)
      Used primarily for the script to store variables and run the algorithm. No actual dialog will appear but the set up info and result image will be stored here.
      Parameters:
      im - Source image.

    • JDialogFacetModel

      public JDialogFacetModel(Frame theParentFrame, ModelImage im)
      Creates a new JDialogFacetModel object.
      Parameters:
      theParentFrame - Parent frame.
      im - Source image.

  • Method Details

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase
      Parameters:
      event - Event that triggers function.

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • getResultImage

      public ModelImage getResultImage()
      Accessor that returns the image.
      Returns:
      The result image.

    • setDisplayLocNew

      public void setDisplayLocNew()
      Accessor that sets the display loc variable to new, so that a new image is created once the algorithm completes.

    • setDisplayLocReplace

      public void setDisplayLocReplace()
      Accessor that sets the display loc variable to replace, so the current image is replaced once the algorithm completes.

    • callAlgorithm

      protected void callAlgorithm()
      Once all the necessary variables are set, call the Frequency Filter algorithm based on what type of image this is and whether or not there is a separate destination image.
      Specified by:
      callAlgorithm in class JDialogScriptableBase

    • setRoutine

      private void setRoutine(int routine)
      Parameters:
      routine -

    • setBlockSide

      private void setBlockSide(int blockSide)
      Parameters:
      blockSide -

    • setAlpha

      private void setAlpha(double alpha)
      Parameters:
      alpha -

    • setGradientDirectionThreshold

      private void setGradientDirectionThreshold(double gradientDirectionThreshold)
      Parameters:
      gradientDirectionThreshold -

    • doPostAlgorithmActions

      protected void doPostAlgorithmActions()
      Store the result image in the script runner's image table now that the action execution is finished.
      Overrides:
      doPostAlgorithmActions in class JDialogScriptableBase

    • setGUIFromParams

      protected void setGUIFromParams()
      Set the dialog GUI using the script parameters while running this algorithm as part of a script.
      Specified by:
      setGUIFromParams in class JDialogScriptableBase

    • storeParamsFromGUI

      protected void storeParamsFromGUI() throws ParserException
      Record the parameters just used to run this algorithm in a script.
      Specified by:
      storeParamsFromGUI in class JDialogScriptableBase
      Throws:
      ParserException - If there is a problem creating/recording the new parameters.

    • init

      private void init()
      Sets up the GUI (panels, buttons, etc) and displays it on the screen.

    • setVariables

      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      Returns:
      true if parameters set successfully, false otherwise.

    • getActionMetadata

      public ActionMetadata getActionMetadata()
      Return meta-information about this discoverable action for categorization and labeling purposes.
      Specified by:
      getActionMetadata in interface ActionDiscovery
      Returns:
      Metadata for this action.

    • createInputParameters

      public ParameterTable createInputParameters()
      Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
      Specified by:
      createInputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the inputs of this algorithm.

    • createOutputParameters

      public ParameterTable createOutputParameters()
      Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
      Specified by:
      createOutputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the outputs of this algorithm.

    • getOutputImageName

      public String getOutputImageName(String imageParamName)
      Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
      Specified by:
      getOutputImageName in interface ActionDiscovery
      Parameters:
      imageParamName - The output image parameter label for which to get the image name.
      Returns:
      The image name of the requested output image parameter label.

    • isActionComplete

      public boolean isActionComplete()
      Returns whether the action has successfully completed its execution.
      Specified by:
      isActionComplete in interface ActionDiscovery
      Returns:
      True, if the action is complete. False, if the action failed or is still running.