Package gov.nih.mipav.view.dialogs

Class JDialogFRET

  • All Implemented Interfaces:
    AlgorithmInterface, DialogDefaultsInterface, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants
    public class JDialogFRET
extends JDialogBase
implements AlgorithmInterface, java.awt.event.ItemListener, java.awt.event.WindowListener
    Dialog to get user input Fluorescence resonance energy transfer Algorithms are executed in their own thread.
    See Also:
    Serialized Form

    • Nested Class Summary

      • Nested classes/interfaces inherited from class javax.swing.JDialog

        javax.swing.JDialog.AccessibleJDialog

      • Nested classes/interfaces inherited from class java.awt.Dialog

        java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType

      • Nested classes/interfaces inherited from class java.awt.Window

        java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

      • Nested classes/interfaces inherited from class java.awt.Container

        java.awt.Container.AccessibleAWTContainer

      • Nested classes/interfaces inherited from class java.awt.Component

        java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void actionPerformed​(java.awt.event.ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      void algorithmPerformed​(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented.
      private javax.swing.JComboBox buildComboBox​(ModelImage image)
      Builds a list of images.
      protected void callAlgorithm()
      DOCUMENT ME!
      private void init()
      Initializes GUI components and displays dialog.
      void itemStateChanged​(java.awt.event.ItemEvent event)
      itemStateChanged.
      void setCost​(int cost)
      DOCUMENT ME!
      void setPostImage​(ModelImage postImage)
      DOCUMENT ME!
      void setRegister​(boolean register)
      DOCUMENT ME!
      void setUseBlue​(boolean useBlue)
      DOCUMENT ME!
      void setUseGreen​(boolean useGreen)
      DOCUMENT ME!
      void setUseRed​(boolean useRed)
      DOCUMENT ME!
      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      void windowClosing​(java.awt.event.WindowEvent event)
      Disposes of error dialog, then frame.

      • Methods inherited from class javax.swing.JDialog

        addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

      • Methods inherited from class java.awt.Dialog

        addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

      • Methods inherited from class java.awt.Window

        addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

      • Methods inherited from class java.awt.Container

        add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

      • Methods inherited from class java.awt.Component

        action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

      • Methods inherited from interface java.awt.event.WindowListener

        windowActivated, windowClosed, windowDeactivated, windowDeiconified, windowIconified, windowOpened

    • Field Detail

      • serialVersionUID

        private static final long serialVersionUID
        Use serialVersionUID for interoperability.
        See Also:
        Constant Field Values

      • backgroundButton

        private javax.swing.JRadioButton backgroundButton
        DOCUMENT ME!

      • backgroundIndex

        private int backgroundIndex
        DOCUMENT ME!

      • blueButton

        private javax.swing.JRadioButton blueButton
        DOCUMENT ME!

      • colorGroup

        private javax.swing.ButtonGroup colorGroup
        DOCUMENT ME!

      • colorsPresent

        private int colorsPresent
        DOCUMENT ME!

      • comboBoxCostFunct

        private javax.swing.JComboBox comboBoxCostFunct
        DOCUMENT ME!

      • cost

        private int cost
        DOCUMENT ME!

      • createRegCheckBox

        private javax.swing.JCheckBox createRegCheckBox
        DOCUMENT ME!

      • createRegImage

        private boolean createRegImage
        DOCUMENT ME!

      • donorButton

        private javax.swing.JRadioButton donorButton
        DOCUMENT ME!

      • donorIndex

        private int donorIndex
        DOCUMENT ME!

      • greenButton

        private javax.swing.JRadioButton greenButton
        DOCUMENT ME!

      • imageComboBox

        private javax.swing.JComboBox imageComboBox
        DOCUMENT ME!

      • labelCost

        private javax.swing.JLabel labelCost
        DOCUMENT ME!

      • maxR

        private double maxR
        DOCUMENT ME!

      • maxG

        private double maxG
        DOCUMENT ME!

      • maxB

        private double maxB
        DOCUMENT ME!

      • minR

        private double minR
        DOCUMENT ME!

      • minG

        private double minG
        DOCUMENT ME!

      • minB

        private double minB
        DOCUMENT ME!

      • nBoundingVOIs

        private int nBoundingVOIs
        DOCUMENT ME!

      • postImage

        private ModelImage postImage
        DOCUMENT ME!

      • redButton

        private javax.swing.JRadioButton redButton
        DOCUMENT ME!

      • regCheckBox

        private javax.swing.JCheckBox regCheckBox
        DOCUMENT ME!

      • register

        private boolean register
        DOCUMENT ME!

      • signalButton

        private javax.swing.JRadioButton signalButton
        DOCUMENT ME!

      • signalIndex

        private int signalIndex
        DOCUMENT ME!

      • useBlue

        private boolean useBlue
        DOCUMENT ME!

      • useGreen

        private boolean useGreen
        DOCUMENT ME!

      • useRed

        private boolean useRed
        DOCUMENT ME!

      • VOIGroup

        private javax.swing.ButtonGroup VOIGroup
        DOCUMENT ME!

      • yPos

        private int yPos
        DOCUMENT ME!

    • Constructor Detail

      • JDialogFRET

        public JDialogFRET​(ModelImage image)
        Creates a new JDialogFRET object.
        Parameters:
        image - DOCUMENT ME!

      • JDialogFRET

        public JDialogFRET​(java.awt.Frame theParentFrame,
                   ModelImage im)
        Creates new dialog.
        Parameters:
        theParentFrame - Parent frame
        im - Source image

    • Method Detail

      • actionPerformed

        public void actionPerformed​(java.awt.event.ActionEvent event)
        Closes dialog box when the OK button is pressed and calls the algorithm.
        Specified by:
        actionPerformed in interface java.awt.event.ActionListener
        Overrides:
        actionPerformed in class JDialogBase
        Parameters:
        event - Event that triggers function.

      • algorithmPerformed

        public void algorithmPerformed​(AlgorithmBase algorithm)
        This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
        Specified by:
        algorithmPerformed in interface AlgorithmInterface
        Parameters:
        algorithm - Algorithm that caused the event.

      • itemStateChanged

        public void itemStateChanged​(java.awt.event.ItemEvent event)
        itemStateChanged.
        Specified by:
        itemStateChanged in interface java.awt.event.ItemListener
        Overrides:
        itemStateChanged in class JDialogBase
        Parameters:
        event - DOCUMENT ME!

      • setCost

        public void setCost​(int cost)
        DOCUMENT ME!
        Parameters:
        cost - DOCUMENT ME!

      • setPostImage

        public void setPostImage​(ModelImage postImage)
        DOCUMENT ME!
        Parameters:
        postImage - DOCUMENT ME!

      • setRegister

        public void setRegister​(boolean register)
        DOCUMENT ME!
        Parameters:
        register - DOCUMENT ME!

      • setUseBlue

        public void setUseBlue​(boolean useBlue)
        DOCUMENT ME!
        Parameters:
        useBlue - DOCUMENT ME!

      • setUseGreen

        public void setUseGreen​(boolean useGreen)
        DOCUMENT ME!
        Parameters:
        useGreen - DOCUMENT ME!

      • setUseRed

        public void setUseRed​(boolean useRed)
        DOCUMENT ME!
        Parameters:
        useRed - DOCUMENT ME!

      • windowClosing

        public void windowClosing​(java.awt.event.WindowEvent event)
        Disposes of error dialog, then frame. Sets cancelled to true.
        Specified by:
        windowClosing in interface java.awt.event.WindowListener
        Overrides:
        windowClosing in class JDialogBase
        Parameters:
        event - DOCUMENT ME!

      • callAlgorithm

        protected void callAlgorithm()
        DOCUMENT ME!

      • buildComboBox

        private javax.swing.JComboBox buildComboBox​(ModelImage image)
        Builds a list of images. Returns combobox. List must be all color or all black and white.
        Parameters:
        image - DOCUMENT ME!
        Returns:
        Newly created combo box.

      • init

        private void init()
        Initializes GUI components and displays dialog.

      • setVariables

        private boolean setVariables()
        Use the GUI results to set up the variables needed to run the algorithm.
        Returns:
        true if parameters set successfully, false otherwise.