Package gov.nih.mipav.view.dialogs
Class JDialogDilate
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogDilate
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- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,ActionDiscovery,java.awt.event.ActionListener,java.awt.event.FocusListener,java.awt.event.ItemListener,java.awt.event.WindowListener,java.awt.image.ImageObserver,java.awt.MenuContainer,java.io.Serializable,java.util.EventListener,javax.accessibility.Accessible,javax.swing.RootPaneContainer,javax.swing.WindowConstants
public class JDialogDilate extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery, java.awt.event.ItemListener
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the source image. In addition the user selects if the algorithm is applied to whole image or to the VOI regions. It should be noted that the algorithms are executed in their own threads.- Version:
- 1.1 March 18, 2009
- Author:
- Matthew J. McAuliffe, Ph.D.
- See Also:
AlgorithmMorphology2D, Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private javax.swing.JRadioButtonbinaryButtonprivate booleanbinaryMorphologyprivate javax.swing.JComboBoxcomboBoxKernelDOCUMENT ME!private AlgorithmMorphology25DdilateAlgo25DDOCUMENT ME!private AlgorithmMorphology2DdilateAlgo2DDOCUMENT ME!private AlgorithmMorphology3DdilateAlgo3DDOCUMENT ME!private booleando25DDOCUMENT ME!private javax.swing.JRadioButtongrayScaleButtonprivate AlgorithmGrayScaleMorphology25DgsDilateAlgo25Dprivate AlgorithmGrayScaleMorphology2DgsDilateAlgo2Dprivate AlgorithmGrayScaleMorphology3DgsDilateAlgo3Dprivate ModelImageimageDOCUMENT ME!private javax.swing.JCheckBoximage25DDOCUMENT ME!private intitersor if the source image is to be replaced.private intkernelDOCUMENT ME!private floatkernelSizeDOCUMENT ME!private javax.swing.JLabellabelKernelDOCUMENT ME!private javax.swing.JLabellabelKernelSizeDOCUMENT ME!private javax.swing.JLabellabelNIterDOCUMENT ME!private javax.swing.JPanelmaskPanelDOCUMENT ME!private javax.swing.ButtonGroupmorphologyGroupprivate JPanelAlgorithmOutputOptionsoutputPanelprivate ModelImageresultImageDOCUMENT ME!private static longserialVersionUIDUse serialVersionUID for interoperability.private javax.swing.JTextFieldtextKernelSizeDOCUMENT ME!private javax.swing.JTextFieldtextNIterDOCUMENT ME!private java.lang.String[]titlesDOCUMENT ME!private ViewUserInterfaceuserInterfaceDOCUMENT ME!-
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogDilate()Empty constructor needed for dynamic instantiation (used during scripting).JDialogDilate(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.private voidbuildComboBox()Builds kernel combo box.protected voidcallAlgorithm()Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.ParameterTablecreateInputParameters()Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).ParameterTablecreateOutputParameters()Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voiddoPostAlgorithmActions()Used to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table).ActionMetadatagetActionMetadata()Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.StringgetOutputImageName(java.lang.String imageParamName)Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).ModelImagegetResultImage()Accessor that returns the image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.booleanisActionComplete()Returns whether the action has successfully completed its execution.voiditemStateChanged(java.awt.event.ItemEvent event)Enables text boxes depending on selection in combo box.protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetImage25D(boolean b)Process the image in 2.5D.voidsetKernelSize(float s)Accessor that sets the kernel size.voidsetKernelType(int krnl)Accessor that sets the kernel type to use.voidsetNumDilations(int n)Accessor that sets the number of dilations to perform.private booleansetVariables()Use the GUI results to set up the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.-
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRun
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Field Detail
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serialVersionUID
private static final long serialVersionUID
Use serialVersionUID for interoperability.- See Also:
- Constant Field Values
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comboBoxKernel
private javax.swing.JComboBox comboBoxKernel
DOCUMENT ME!
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dilateAlgo25D
private AlgorithmMorphology25D dilateAlgo25D
DOCUMENT ME!
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dilateAlgo2D
private AlgorithmMorphology2D dilateAlgo2D
DOCUMENT ME!
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dilateAlgo3D
private AlgorithmMorphology3D dilateAlgo3D
DOCUMENT ME!
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gsDilateAlgo2D
private AlgorithmGrayScaleMorphology2D gsDilateAlgo2D
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gsDilateAlgo25D
private AlgorithmGrayScaleMorphology25D gsDilateAlgo25D
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gsDilateAlgo3D
private AlgorithmGrayScaleMorphology3D gsDilateAlgo3D
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morphologyGroup
private javax.swing.ButtonGroup morphologyGroup
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binaryButton
private javax.swing.JRadioButton binaryButton
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grayScaleButton
private javax.swing.JRadioButton grayScaleButton
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binaryMorphology
private boolean binaryMorphology
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do25D
private boolean do25D
DOCUMENT ME!
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image
private ModelImage image
DOCUMENT ME!
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image25D
private javax.swing.JCheckBox image25D
DOCUMENT ME!
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iters
private int iters
or if the source image is to be replaced.
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kernel
private int kernel
DOCUMENT ME!
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kernelSize
private float kernelSize
DOCUMENT ME!
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labelKernel
private javax.swing.JLabel labelKernel
DOCUMENT ME!
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labelKernelSize
private javax.swing.JLabel labelKernelSize
DOCUMENT ME!
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labelNIter
private javax.swing.JLabel labelNIter
DOCUMENT ME!
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maskPanel
private javax.swing.JPanel maskPanel
DOCUMENT ME!
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resultImage
private ModelImage resultImage
DOCUMENT ME!
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textKernelSize
private javax.swing.JTextField textKernelSize
DOCUMENT ME!
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textNIter
private javax.swing.JTextField textNIter
DOCUMENT ME!
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titles
private java.lang.String[] titles
DOCUMENT ME!
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userInterface
private ViewUserInterface userInterface
DOCUMENT ME!
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outputPanel
private JPanelAlgorithmOutputOptions outputPanel
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Constructor Detail
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JDialogDilate
public JDialogDilate()
Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogDilate
public JDialogDilate(java.awt.Frame theParentFrame, ModelImage im)Creates new dialog.- Parameters:
theParentFrame- Parent frameim- Source image
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Method Detail
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storeParamsFromGUI
protected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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setGUIFromParams
protected void setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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doPostAlgorithmActions
protected void doPostAlgorithmActions()
Used to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table). Defaults to no action, override to actually have it do something.- Overrides:
doPostAlgorithmActionsin classJDialogScriptableBase
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actionPerformed
public void actionPerformed(java.awt.event.ActionEvent event)
Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformedin interfacejava.awt.event.ActionListener- Overrides:
actionPerformedin classJDialogBase- Parameters:
event- Event that triggers function
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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getResultImage
public ModelImage getResultImage()
Accessor that returns the image.- Returns:
- The result image
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itemStateChanged
public void itemStateChanged(java.awt.event.ItemEvent event)
Enables text boxes depending on selection in combo box.- Specified by:
itemStateChangedin interfacejava.awt.event.ItemListener- Overrides:
itemStateChangedin classJDialogBase- Parameters:
event- Event that triggered this function.
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setImage25D
public void setImage25D(boolean b)
Process the image in 2.5D.- Parameters:
b- whether to do 2.5D morphology
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setKernelSize
public void setKernelSize(float s)
Accessor that sets the kernel size.- Parameters:
s- the desired kernel size
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setKernelType
public void setKernelType(int krnl)
Accessor that sets the kernel type to use.- Parameters:
krnl- the kernel type to use (either AlgorithmMorphology2D.CONNECTED4, AlgorithmMorphology2D.CONNECTED8, AlgorithmMorphology2D.CONNECTED12, AlgorithmMorphology2D.SIZED_CIRCLE, AlgorithmMorphology3D.CONNECTED6, AlgorithmMorphology3D.CONNECTED26, AlgorithmMorphology3D.CONNECTED24, AlgorithmMorphology3D.SIZED_SPHERE (or the ones in AlgorithmMorphology25D))
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setNumDilations
public void setNumDilations(int n)
Accessor that sets the number of dilations to perform.- Parameters:
n- The number of dilations to do.
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buildComboBox
private void buildComboBox()
Builds kernel combo box.
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callAlgorithm
protected void callAlgorithm()
Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithmin classJDialogScriptableBase
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init
private void init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.
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setVariables
private boolean setVariables()
Use the GUI results to set up the variables needed to run the algorithm.- Returns:
trueif parameters set successfully,falseotherwise.
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getActionMetadata
public ActionMetadata getActionMetadata()
Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
getActionMetadatain interfaceActionDiscovery- Returns:
- Metadata for this action.
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createInputParameters
public ParameterTable createInputParameters()
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
createInputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
public ParameterTable createOutputParameters()
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
createOutputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the outputs of this algorithm.
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getOutputImageName
public java.lang.String getOutputImageName(java.lang.String imageParamName)
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
getOutputImageNamein interfaceActionDiscovery- Parameters:
imageParamName- The output image parameter label for which to get the image name.- Returns:
- The image name of the requested output image parameter label.
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isActionComplete
public boolean isActionComplete()
Returns whether the action has successfully completed its execution.- Specified by:
isActionCompletein interfaceActionDiscovery- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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