Package gov.nih.mipav.view.dialogs
Class JDialogDilate
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogDilate
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- All Implemented Interfaces:
AlgorithmInterface
,ScriptableActionInterface
,DialogDefaultsInterface
,ActionDiscovery
,java.awt.event.ActionListener
,java.awt.event.FocusListener
,java.awt.event.ItemListener
,java.awt.event.WindowListener
,java.awt.image.ImageObserver
,java.awt.MenuContainer
,java.io.Serializable
,java.util.EventListener
,javax.accessibility.Accessible
,javax.swing.RootPaneContainer
,javax.swing.WindowConstants
public class JDialogDilate extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery, java.awt.event.ItemListener
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the source image. In addition the user selects if the algorithm is applied to whole image or to the VOI regions. It should be noted that the algorithms are executed in their own threads.- Version:
- 1.1 March 18, 2009
- Author:
- Matthew J. McAuliffe, Ph.D.
- See Also:
AlgorithmMorphology2D
, Serialized Form
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Nested Class Summary
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Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialog
javax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialog
java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Window
java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
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Field Summary
Fields Modifier and Type Field Description private javax.swing.JRadioButton
binaryButton
private boolean
binaryMorphology
private javax.swing.JComboBox
comboBoxKernel
DOCUMENT ME!private AlgorithmMorphology25D
dilateAlgo25D
DOCUMENT ME!private AlgorithmMorphology2D
dilateAlgo2D
DOCUMENT ME!private AlgorithmMorphology3D
dilateAlgo3D
DOCUMENT ME!private boolean
do25D
DOCUMENT ME!private javax.swing.JRadioButton
grayScaleButton
private AlgorithmGrayScaleMorphology25D
gsDilateAlgo25D
private AlgorithmGrayScaleMorphology2D
gsDilateAlgo2D
private AlgorithmGrayScaleMorphology3D
gsDilateAlgo3D
private ModelImage
image
DOCUMENT ME!private javax.swing.JCheckBox
image25D
DOCUMENT ME!private int
iters
or if the source image is to be replaced.private int
kernel
DOCUMENT ME!private float
kernelSize
DOCUMENT ME!private javax.swing.JLabel
labelKernel
DOCUMENT ME!private javax.swing.JLabel
labelKernelSize
DOCUMENT ME!private javax.swing.JLabel
labelNIter
DOCUMENT ME!private javax.swing.JPanel
maskPanel
DOCUMENT ME!private javax.swing.ButtonGroup
morphologyGroup
private JPanelAlgorithmOutputOptions
outputPanel
private ModelImage
resultImage
DOCUMENT ME!private static long
serialVersionUID
Use serialVersionUID for interoperability.private javax.swing.JTextField
textKernelSize
DOCUMENT ME!private javax.swing.JTextField
textNIter
DOCUMENT ME!private java.lang.String[]
titles
DOCUMENT ME!private ViewUserInterface
userInterface
DOCUMENT ME!-
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
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Constructor Summary
Constructors Constructor Description JDialogDilate()
Empty constructor needed for dynamic instantiation (used during scripting).JDialogDilate(java.awt.Frame theParentFrame, ModelImage im)
Creates new dialog.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
actionPerformed(java.awt.event.ActionEvent event)
Closes dialog box when the OK button is pressed and calls the algorithm.void
algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented.private void
buildComboBox()
Builds kernel combo box.protected void
callAlgorithm()
Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.ParameterTable
createInputParameters()
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()
).ParameterTable
createOutputParameters()
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected void
doPostAlgorithmActions()
Used to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table).ActionMetadata
getActionMetadata()
Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.String
getOutputImageName(java.lang.String imageParamName)
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).ModelImage
getResultImage()
Accessor that returns the image.private void
init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.boolean
isActionComplete()
Returns whether the action has successfully completed its execution.void
itemStateChanged(java.awt.event.ItemEvent event)
Enables text boxes depending on selection in combo box.protected void
setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.void
setImage25D(boolean b)
Process the image in 2.5D.void
setKernelSize(float s)
Accessor that sets the kernel size.void
setKernelType(int krnl)
Accessor that sets the kernel type to use.void
setNumDilations(int n)
Accessor that sets the number of dilations to perform.private boolean
setVariables()
Use the GUI results to set up the variables needed to run the algorithm.protected void
storeParamsFromGUI()
Record the parameters just used to run this algorithm in a script.-
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRun
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Field Detail
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serialVersionUID
private static final long serialVersionUID
Use serialVersionUID for interoperability.- See Also:
- Constant Field Values
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comboBoxKernel
private javax.swing.JComboBox comboBoxKernel
DOCUMENT ME!
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dilateAlgo25D
private AlgorithmMorphology25D dilateAlgo25D
DOCUMENT ME!
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dilateAlgo2D
private AlgorithmMorphology2D dilateAlgo2D
DOCUMENT ME!
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dilateAlgo3D
private AlgorithmMorphology3D dilateAlgo3D
DOCUMENT ME!
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gsDilateAlgo2D
private AlgorithmGrayScaleMorphology2D gsDilateAlgo2D
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gsDilateAlgo25D
private AlgorithmGrayScaleMorphology25D gsDilateAlgo25D
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gsDilateAlgo3D
private AlgorithmGrayScaleMorphology3D gsDilateAlgo3D
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morphologyGroup
private javax.swing.ButtonGroup morphologyGroup
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binaryButton
private javax.swing.JRadioButton binaryButton
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grayScaleButton
private javax.swing.JRadioButton grayScaleButton
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binaryMorphology
private boolean binaryMorphology
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do25D
private boolean do25D
DOCUMENT ME!
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image
private ModelImage image
DOCUMENT ME!
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image25D
private javax.swing.JCheckBox image25D
DOCUMENT ME!
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iters
private int iters
or if the source image is to be replaced.
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kernel
private int kernel
DOCUMENT ME!
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kernelSize
private float kernelSize
DOCUMENT ME!
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labelKernel
private javax.swing.JLabel labelKernel
DOCUMENT ME!
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labelKernelSize
private javax.swing.JLabel labelKernelSize
DOCUMENT ME!
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labelNIter
private javax.swing.JLabel labelNIter
DOCUMENT ME!
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maskPanel
private javax.swing.JPanel maskPanel
DOCUMENT ME!
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resultImage
private ModelImage resultImage
DOCUMENT ME!
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textKernelSize
private javax.swing.JTextField textKernelSize
DOCUMENT ME!
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textNIter
private javax.swing.JTextField textNIter
DOCUMENT ME!
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titles
private java.lang.String[] titles
DOCUMENT ME!
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userInterface
private ViewUserInterface userInterface
DOCUMENT ME!
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outputPanel
private JPanelAlgorithmOutputOptions outputPanel
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Constructor Detail
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JDialogDilate
public JDialogDilate()
Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogDilate
public JDialogDilate(java.awt.Frame theParentFrame, ModelImage im)
Creates new dialog.- Parameters:
theParentFrame
- Parent frameim
- Source image
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Method Detail
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storeParamsFromGUI
protected void storeParamsFromGUI() throws ParserException
Record the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUI
in classJDialogScriptableBase
- Throws:
ParserException
- If there is a problem creating/recording the new parameters.
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setGUIFromParams
protected void setGUIFromParams()
Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParams
in classJDialogScriptableBase
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doPostAlgorithmActions
protected void doPostAlgorithmActions()
Used to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table). Defaults to no action, override to actually have it do something.- Overrides:
doPostAlgorithmActions
in classJDialogScriptableBase
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actionPerformed
public void actionPerformed(java.awt.event.ActionEvent event)
Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformed
in interfacejava.awt.event.ActionListener
- Overrides:
actionPerformed
in classJDialogBase
- Parameters:
event
- Event that triggers function
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algorithmPerformed
public void algorithmPerformed(AlgorithmBase algorithm)
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformed
in interfaceAlgorithmInterface
- Parameters:
algorithm
- Algorithm that caused the event.
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getResultImage
public ModelImage getResultImage()
Accessor that returns the image.- Returns:
- The result image
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itemStateChanged
public void itemStateChanged(java.awt.event.ItemEvent event)
Enables text boxes depending on selection in combo box.- Specified by:
itemStateChanged
in interfacejava.awt.event.ItemListener
- Overrides:
itemStateChanged
in classJDialogBase
- Parameters:
event
- Event that triggered this function.
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setImage25D
public void setImage25D(boolean b)
Process the image in 2.5D.- Parameters:
b
- whether to do 2.5D morphology
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setKernelSize
public void setKernelSize(float s)
Accessor that sets the kernel size.- Parameters:
s
- the desired kernel size
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setKernelType
public void setKernelType(int krnl)
Accessor that sets the kernel type to use.- Parameters:
krnl
- the kernel type to use (either AlgorithmMorphology2D.CONNECTED4, AlgorithmMorphology2D.CONNECTED8, AlgorithmMorphology2D.CONNECTED12, AlgorithmMorphology2D.SIZED_CIRCLE, AlgorithmMorphology3D.CONNECTED6, AlgorithmMorphology3D.CONNECTED26, AlgorithmMorphology3D.CONNECTED24, AlgorithmMorphology3D.SIZED_SPHERE (or the ones in AlgorithmMorphology25D))
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setNumDilations
public void setNumDilations(int n)
Accessor that sets the number of dilations to perform.- Parameters:
n
- The number of dilations to do.
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buildComboBox
private void buildComboBox()
Builds kernel combo box.
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callAlgorithm
protected void callAlgorithm()
Once all the necessary variables are set, call the Gaussian Blur algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithm
in classJDialogScriptableBase
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init
private void init()
Sets up the GUI (panels, buttons, etc) and displays it on the screen.
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setVariables
private boolean setVariables()
Use the GUI results to set up the variables needed to run the algorithm.- Returns:
true
if parameters set successfully,false
otherwise.
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getActionMetadata
public ActionMetadata getActionMetadata()
Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
getActionMetadata
in interfaceActionDiscovery
- Returns:
- Metadata for this action.
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createInputParameters
public ParameterTable createInputParameters()
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()
).- Specified by:
createInputParameters
in interfaceActionDiscovery
- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
public ParameterTable createOutputParameters()
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
createOutputParameters
in interfaceActionDiscovery
- Returns:
- A parameter table listing the outputs of this algorithm.
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getOutputImageName
public java.lang.String getOutputImageName(java.lang.String imageParamName)
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
getOutputImageName
in interfaceActionDiscovery
- Parameters:
imageParamName
- The output image parameter label for which to get the image name.- Returns:
- The image name of the requested output image parameter label.
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isActionComplete
public boolean isActionComplete()
Returns whether the action has successfully completed its execution.- Specified by:
isActionComplete
in interfaceActionDiscovery
- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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