Package gov.nih.mipav.view.dialogs

Class JDialogDTICreateListFileRegOAR35DOptions

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Window

java.awt.Dialog

javax.swing.JDialog

gov.nih.mipav.view.dialogs.JDialogBase

gov.nih.mipav.view.dialogs.JDialogDTICreateListFileRegOAR35DOptions

All Implemented Interfaces:

DialogDefaultsInterface, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants

public class JDialogDTICreateListFileRegOAR35DOptions
extends JDialogBase

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase

JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction

Nested classes/interfaces inherited from class javax.swing.JDialog

JDialog.AccessibleJDialog

Nested classes/interfaces inherited from class java.awt.Dialog

Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityType

Nested classes/interfaces inherited from class java.awt.Window

Window.AccessibleAWTWindow, Window.Type

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field	Description
private JDialog	advancedDialog	Variables for Advanced Settings dialog.
private int	bracketBound	DOCUMENT ME!
private int	bracketBound_def	DOCUMENT ME!
private JTextField	bracketBoundText	DOCUMENT ME!
private JPanel	coarsePanelX	DOCUMENT ME!
private JPanel	coarsePanelY	DOCUMENT ME!
private JPanel	coarsePanelZ	DOCUMENT ME!
private float	coarseRate	DOCUMENT ME!
private JTextField	coarseRateText	DOCUMENT ME!
private JTextField	coarseRateTextX	DOCUMENT ME!
private JTextField	coarseRateTextY	DOCUMENT ME!
private JTextField	coarseRateTextZ	DOCUMENT ME!
private float	coarseRateX	DOCUMENT ME!
private float	coarseRateY	DOCUMENT ME!
private float	coarseRateZ	DOCUMENT ME!
private JComboBox	comboBoxCostFunct	DOCUMENT ME!
private JComboBox	comboBoxDOF	DOCUMENT ME!
private JComboBox	comboBoxInterp	DOCUMENT ME!
private JComboBox	comboBoxInterp2	DOCUMENT ME!
private int	cost	DOCUMENT ME!
private int	DOF	DOCUMENT ME!
private boolean	doMultiThread
private boolean	doSubsample	DOCUMENT ME!
private boolean	fastMode	DOCUMENT ME!
private JCheckBox	fastModeCheckbox	DOCUMENT ME!
private JPanel	finePanelX	DOCUMENT ME!
private JPanel	finePanelY	DOCUMENT ME!
private JPanel	finePanelZ	DOCUMENT ME!
private float	fineRate	DOCUMENT ME!
private JTextField	fineRateText	DOCUMENT ME!
private JTextField	fineRateTextX	DOCUMENT ME!
private JTextField	fineRateTextY	DOCUMENT ME!
private JTextField	fineRateTextZ	DOCUMENT ME!
private float	fineRateX	DOCUMENT ME!
private float	fineRateY	DOCUMENT ME!
private float	fineRateZ	DOCUMENT ME!
private GridBagConstraints	gbc	DOCUMENT ME!
private int	interp	DOCUMENT ME!
private int	interp2	DOCUMENT ME!
private boolean	isDICOM
private JLabel	labelInterp2	DOCUMENT ME!
private int	maxIterations	DOCUMENT ME!
private int	maxIterations_def	DOCUMENT ME!
private JTextField	maxIterationsText	DOCUMENT ME!
private boolean	maxOfMinResol	DOCUMENT ME!
private JCheckBox	minMaxCheckbox	DOCUMENT ME!
private JCheckBox	multiThreadCheckBox
private int	numMinima	DOCUMENT ME!
private int	numMinima_def	DOCUMENT ME!
private JTextField	numMinText	DOCUMENT ME!
private int	registerTo
private float	rotateBegin	DOCUMENT ME!
private JTextField	rotateBeginText	DOCUMENT ME!
private JTextField	rotateBeginTextX	DOCUMENT ME!
private JTextField	rotateBeginTextY	DOCUMENT ME!
private JTextField	rotateBeginTextZ	DOCUMENT ME!
private float	rotateBeginX	DOCUMENT ME!
private float	rotateBeginY	DOCUMENT ME!
private float	rotateBeginZ	DOCUMENT ME!
private float	rotateEnd	DOCUMENT ME!
private JTextField	rotateEndText	DOCUMENT ME!
private JTextField	rotateEndTextX	DOCUMENT ME!
private JTextField	rotateEndTextY	DOCUMENT ME!
private JTextField	rotateEndTextZ	DOCUMENT ME!
private float	rotateEndX	DOCUMENT ME!
private float	rotateEndY	DOCUMENT ME!
private float	rotateEndZ	DOCUMENT ME!
private JPanel	rotatePanel
private JPanel	rotateRangePanelX	DOCUMENT ME!
private JPanel	rotateRangePanelY	DOCUMENT ME!
private JPanel	rotateRangePanelZ	DOCUMENT ME!
private JCheckBox	sampleCheckBox	DOCUMENT ME!
private static final long	serialVersionUID	Use serialVersionUID for interoperability.
private JCheckBox	universalCheckbox	DOCUMENT ME!
private JRadioButton	xRadio	DOCUMENT ME!
private boolean	xSelected	DOCUMENT ME!
private JRadioButton	yRadio	DOCUMENT ME!
private boolean	ySelected	DOCUMENT ME!
private JRadioButton	zRadio	DOCUMENT ME!

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase

applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager

Fields inherited from class javax.swing.JDialog

accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog

DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants

DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors

Constructor	Description
JDialogDTICreateListFileRegOAR35DOptions(boolean isDICOM)	Creates new dialog for user to choose variables for internal registration.

Method Summary

Modifier and Type	Method	Description
void	actionPerformed(ActionEvent event)	Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.
private JDialog	buildAdvancedDialog(int bracketBound, int maxIter, int numMinima)	Build advanced settings dialog.
int	getBracketBound()
float	getCoarseRate()
float	getCoarseRateX()
float	getCoarseRateY()
float	getCoarseRateZ()
int	getCost()
int	getDOF()
float	getFineRate()
float	getFineRateX()
float	getFineRateY()
float	getFineRateZ()
int	getInterp()
int	getInterp2()
int	getMaxIterations()
int	getNumMinima()
int	getRegisterTo()
float	getRotateBegin()
float	getRotateBeginX()
float	getRotateBeginY()
float	getRotateBeginZ()
float	getRotateEnd()
float	getRotateEndX()
float	getRotateEndY()
float	getRotateEndZ()
private void	init()	Initializes the GUI components and displays the dialog.
boolean	isDoMultiThread()
boolean	isDoSubsample()
boolean	isFastMode()
boolean	isMaxOfMinResol()
void	itemStateChanged(ItemEvent event)	Changes the interpolation box to enabled or disabled depending on if the transform box is checked or not.
void	setBracketBound(int bracketBound)	Accessor to set bracketBound.
void	setCoarseBegin(float x)	Accessor to set the coarse sample begin.
void	setCoarseEnd(float x)	Accessor to set the coarse sample end.
void	setCoarseRate(float x)	Accessor to set the coarse sample rate.
void	setCostChoice(int x)	Accessor to set the choice of cost function.
void	setDOF(int x)	Accessor to set the degrees of freedom.
void	setFastMode(boolean flag)	Accessor to set whether or not to execute the fast mode (skip sub sample and goto last final optimization).
void	setFineRate(float x)	Accessor to set the fine sample rate.
void	setInterp(int x)	Accessor to set the initial interpolation.
void	setInterp2(int x)	Accessor to set the final interpolation.
void	setMaxIterations(int maxIterations)	Accessor to set maxIterations.
void	setMultiThread(boolean doMultiThread)	Accessor to set if multithreading is used
void	setNumMinima(int numMinima)	Accessor to set numMinima.
void	setSubsample(boolean doSubsample)	Accessor to set whether or not subsampling occurs.
boolean	setVariables()	Sets the variables needed to call the registration algorithm based on the values entered in the dialog.
private void	showX()	DOCUMENT ME!
private void	showY()	DOCUMENT ME!
private void	showZ()	DOCUMENT ME!
void	windowClosing(WindowEvent event)	Disposes of error dialog, then frame.

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase

buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JDialog

addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog

addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

serialVersionUID

private static final long serialVersionUID

Use serialVersionUID for interoperability.

See Also:

• Constant Field Values

advancedDialog

private JDialog advancedDialog

Variables for Advanced Settings dialog.

bracketBoundText

private JTextField bracketBoundText

DOCUMENT ME!

maxIterationsText

private JTextField maxIterationsText

DOCUMENT ME!

numMinText

private JTextField numMinText

DOCUMENT ME!

comboBoxCostFunct

private JComboBox comboBoxCostFunct

DOCUMENT ME!

comboBoxDOF

private JComboBox comboBoxDOF

DOCUMENT ME!

comboBoxInterp

private JComboBox comboBoxInterp

DOCUMENT ME!

comboBoxInterp2

private JComboBox comboBoxInterp2

DOCUMENT ME!

cost

private int cost

DOCUMENT ME!

interp

private int interp

DOCUMENT ME!

interp2

private int interp2

DOCUMENT ME!

DOF

private int DOF

DOCUMENT ME!

doSubsample

private boolean doSubsample

DOCUMENT ME!

doMultiThread

private boolean doMultiThread

fastMode

private boolean fastMode

DOCUMENT ME!

fastModeCheckbox

private JCheckBox fastModeCheckbox

DOCUMENT ME!

maxOfMinResol

private boolean maxOfMinResol

DOCUMENT ME!

labelInterp2

private JLabel labelInterp2

DOCUMENT ME!

gbc

private GridBagConstraints gbc

DOCUMENT ME!

xSelected

private boolean xSelected

DOCUMENT ME!

ySelected

private boolean ySelected

DOCUMENT ME!

rotatePanel

private JPanel rotatePanel

maxIterations_def

private int maxIterations_def

DOCUMENT ME!

bracketBound_def

private int bracketBound_def

DOCUMENT ME!

numMinima_def

private int numMinima_def

DOCUMENT ME!

maxIterations

private int maxIterations

DOCUMENT ME!

bracketBound

private int bracketBound

DOCUMENT ME!

numMinima

private int numMinima

DOCUMENT ME!

registerTo

private int registerTo

isDICOM

private boolean isDICOM

universalCheckbox

private JCheckBox universalCheckbox

DOCUMENT ME!

xRadio

private JRadioButton xRadio

DOCUMENT ME!

yRadio

private JRadioButton yRadio

DOCUMENT ME!

zRadio

private JRadioButton zRadio

DOCUMENT ME!

rotateRangePanelX

private JPanel rotateRangePanelX

DOCUMENT ME!

rotateRangePanelY

private JPanel rotateRangePanelY

DOCUMENT ME!

rotateRangePanelZ

private JPanel rotateRangePanelZ

DOCUMENT ME!

finePanelX

private JPanel finePanelX

DOCUMENT ME!

finePanelY

private JPanel finePanelY

DOCUMENT ME!

finePanelZ

private JPanel finePanelZ

DOCUMENT ME!

coarsePanelX

private JPanel coarsePanelX

DOCUMENT ME!

coarsePanelY

private JPanel coarsePanelY

DOCUMENT ME!

coarsePanelZ

private JPanel coarsePanelZ

DOCUMENT ME!

rotateBegin

private float rotateBegin

DOCUMENT ME!

rotateEnd

private float rotateEnd

DOCUMENT ME!

coarseRate

private float coarseRate

DOCUMENT ME!

fineRate

private float fineRate

DOCUMENT ME!

rotateBeginX

private float rotateBeginX

DOCUMENT ME!

rotateEndX

private float rotateEndX

DOCUMENT ME!

coarseRateX

private float coarseRateX

DOCUMENT ME!

fineRateX

private float fineRateX

DOCUMENT ME!

rotateBeginY

private float rotateBeginY

DOCUMENT ME!

rotateEndY

private float rotateEndY

DOCUMENT ME!

coarseRateY

private float coarseRateY

DOCUMENT ME!

fineRateY

private float fineRateY

DOCUMENT ME!

rotateBeginZ

private float rotateBeginZ

DOCUMENT ME!

rotateEndZ

private float rotateEndZ

DOCUMENT ME!

coarseRateZ

private float coarseRateZ

DOCUMENT ME!

fineRateZ

private float fineRateZ

DOCUMENT ME!

rotateBeginText

private JTextField rotateBeginText

DOCUMENT ME!

rotateEndText

private JTextField rotateEndText

DOCUMENT ME!

coarseRateText

private JTextField coarseRateText

DOCUMENT ME!

fineRateText

private JTextField fineRateText

DOCUMENT ME!

rotateBeginTextX

private JTextField rotateBeginTextX

DOCUMENT ME!

rotateEndTextX

private JTextField rotateEndTextX

DOCUMENT ME!

coarseRateTextX

private JTextField coarseRateTextX

DOCUMENT ME!

fineRateTextX

private JTextField fineRateTextX

DOCUMENT ME!

rotateBeginTextY

private JTextField rotateBeginTextY

DOCUMENT ME!

rotateEndTextY

private JTextField rotateEndTextY

DOCUMENT ME!

coarseRateTextY

private JTextField coarseRateTextY

DOCUMENT ME!

fineRateTextY

private JTextField fineRateTextY

DOCUMENT ME!

rotateBeginTextZ

private JTextField rotateBeginTextZ

DOCUMENT ME!

rotateEndTextZ

private JTextField rotateEndTextZ

DOCUMENT ME!

coarseRateTextZ

private JTextField coarseRateTextZ

DOCUMENT ME!

fineRateTextZ

private JTextField fineRateTextZ

DOCUMENT ME!

sampleCheckBox

private JCheckBox sampleCheckBox

DOCUMENT ME!

multiThreadCheckBox

private JCheckBox multiThreadCheckBox

minMaxCheckbox

private JCheckBox minMaxCheckbox

DOCUMENT ME!

Constructor Details

JDialogDTICreateListFileRegOAR35DOptions

public JDialogDTICreateListFileRegOAR35DOptions(boolean isDICOM)

Creates new dialog for user to choose variables for internal registration.

Parameters:

theParentFrame - Parent frame.

im - Source image.

Method Details

actionPerformed

public void actionPerformed(ActionEvent event)

Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.

Specified by:

actionPerformed in interface ActionListener

Overrides:

actionPerformed in class JDialogBase

Parameters:

event - Event that triggers function.

itemStateChanged

public void itemStateChanged(ItemEvent event)

Changes the interpolation box to enabled or disabled depending on if the transform box is checked or not.

Specified by:

itemStateChanged in interface ItemListener

Overrides:

itemStateChanged in class JDialogBase

Parameters:

event - Event that triggered this function.

setBracketBound

public void setBracketBound(int bracketBound)

Accessor to set bracketBound.

Parameters:

bracketBound - DOCUMENT ME!

setCoarseBegin

public void setCoarseBegin(float x)

Accessor to set the coarse sample begin.

Parameters:

x - Coarse begin

setCoarseEnd

public void setCoarseEnd(float x)

Accessor to set the coarse sample end.

Parameters:

x - Coarse end

setCoarseRate

public void setCoarseRate(float x)

Accessor to set the coarse sample rate.

Parameters:

x - Coarse rate

setCostChoice

public void setCostChoice(int x)

Accessor to set the choice of cost function.

Parameters:

x - Cost function.

setDOF

public void setDOF(int x)

Accessor to set the degrees of freedom.

Parameters:

x - Degrees of freedom

setFastMode

public void setFastMode(boolean flag)

Accessor to set whether or not to execute the fast mode (skip sub sample and goto last final optimization).

Parameters:

flag - true then skip to level one (last ) optimization.

setFineRate

public void setFineRate(float x)

Accessor to set the fine sample rate.

Parameters:

x - Fine rate

setInterp

public void setInterp(int x)

Accessor to set the initial interpolation.

Parameters:

x - Interpolation

setInterp2

public void setInterp2(int x)

Accessor to set the final interpolation.

Parameters:

x - Interpolation

setMaxIterations

public void setMaxIterations(int maxIterations)

Accessor to set maxIterations.

Parameters:

maxIterations - DOCUMENT ME!

setNumMinima

public void setNumMinima(int numMinima)

Accessor to set numMinima.

Parameters:

numMinima - DOCUMENT ME!

setSubsample

public void setSubsample(boolean doSubsample)

Accessor to set whether or not subsampling occurs.

Parameters:

doSubsample - DOCUMENT ME!

setMultiThread

public void setMultiThread(boolean doMultiThread)

Accessor to set if multithreading is used

Parameters:

doMultiThread -

buildAdvancedDialog

private JDialog buildAdvancedDialog(int bracketBound,
 int maxIter,
 int numMinima)

Build advanced settings dialog. Returns JDialog.

Parameters:

bracketBound - DOCUMENT ME!

maxIter - DOCUMENT ME!

numMinima - DOCUMENT ME!

Returns:

DOCUMENT ME!

init

private void init()

Initializes the GUI components and displays the dialog.

setVariables

public boolean setVariables()

Sets the variables needed to call the registration algorithm based on the values entered in the dialog.

Returns:

true if the variables are properly set, false otherwise.

windowClosing

public void windowClosing(WindowEvent event)

Description copied from class: JDialogBase

Disposes of error dialog, then frame. Sets cancelled to true.

Specified by:

windowClosing in interface WindowListener

Overrides:

windowClosing in class JDialogBase

Parameters:

event - WindowEvent

showX

private void showX()

DOCUMENT ME!

showY

private void showY()

DOCUMENT ME!

showZ

private void showZ()

DOCUMENT ME!

getCost

public int getCost()

getDOF

public int getDOF()

getInterp

public int getInterp()

getInterp2

public int getInterp2()

getRegisterTo

public int getRegisterTo()

getRotateBegin

public float getRotateBegin()

getRotateEnd

public float getRotateEnd()

getCoarseRate

public float getCoarseRate()

getFineRate

public float getFineRate()

isDoSubsample

public boolean isDoSubsample()

isDoMultiThread

public boolean isDoMultiThread()

isFastMode

public boolean isFastMode()

getBracketBound

public int getBracketBound()

getMaxIterations

public int getMaxIterations()

getNumMinima

public int getNumMinima()

getCoarseRateX

public float getCoarseRateX()

getCoarseRateZ

public float getCoarseRateZ()

getCoarseRateY

public float getCoarseRateY()

getFineRateX

public float getFineRateX()

getFineRateY

public float getFineRateY()

getFineRateZ

public float getFineRateZ()

getRotateBeginX

public float getRotateBeginX()

getRotateBeginY

public float getRotateBeginY()

getRotateBeginZ

public float getRotateBeginZ()

getRotateEndX

public float getRotateEndX()

getRotateEndY

public float getRotateEndY()

getRotateEndZ

public float getRotateEndZ()

isMaxOfMinResol

public boolean isMaxOfMinResol()