Package gov.nih.mipav.view.dialogs

Class JDialogBilateralFilter

java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogBilateralFilter
All Implemented Interfaces:
AlgorithmInterface, ScriptableActionInterface, DialogDefaultsInterface, ActionDiscovery, ActionListener, FocusListener, ItemListener, WindowListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible, RootPaneContainer, WindowConstants
public class JDialogBilateralFilter extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery, ScriptableActionInterface
Dialog to get user input, then call the algorithm. The user is able to control the degree of blurring in all dimensions and indicate if a correction factor be applied to the z-dimension to account for differing resolutions between the xy resolutions (intra-plane) and the z resolution (inter-plane). In addition to the spatial domain filtering, range filtering also occurs so that pixels with similar intensity values are more heavily weighed. The user has the option to generate a new image or replace the source image. In addition the user can indicate if he/she wishes to have the algorithm applied to whole image or to the VOI regions. It should be noted that the algorithms are executed in their own thread.
Version:
0.1 February 5, 2009
Author:
William Gandler
See Also:

  • Field Details

    • bilateralFilterAlgo

      private AlgorithmBilateralFilter bilateralFilterAlgo
      DOCUMENT ME!

    • image

      private ModelImage image
      Source image.

    • image25D

      private boolean image25D
      Flag indicating if slices should be blurred independently.

    • image25DCheckbox

      private JCheckBox image25DCheckbox
      DOCUMENT ME!

    • outputOptionsPanel

      private JPanelAlgorithmOutputOptions outputOptionsPanel
      DOCUMENT ME!

    • resultImage

      private ModelImage resultImage
      Result image.

    • sigmaPanel

      private JPanelSigmas sigmaPanel
      DOCUMENT ME!

    • intensityPanel

      private JPanel intensityPanel

    • intensityLabel

      private JLabel intensityLabel

    • intensityText

      private JTextField intensityText

    • intensityFraction

      private float intensityFraction

    • titles

      private String[] titles
      DOCUMENT ME!

    • userInterface

      private ViewUserInterface userInterface
      DOCUMENT ME!

    • useProgressBar

      private boolean useProgressBar

  • Constructor Details

    • JDialogBilateralFilter

      public JDialogBilateralFilter()
      Empty constructor needed for dynamic instantiation.

    • JDialogBilateralFilter

      public JDialogBilateralFilter(Frame theParentFrame, ModelImage im)
      Construct the bilateral filter dialog.
      Parameters:
      theParentFrame - Parent frame.
      im - Source image.

  • Method Details

    • actionPerformed

      public void actionPerformed(ActionEvent event)
      Closes dialog box when the OK button is pressed and calls the algorithm.
      Specified by:
      actionPerformed in interface ActionListener
      Overrides:
      actionPerformed in class JDialogBase
      Parameters:
      event - Event that triggers function.

    • algorithmPerformed

      public void algorithmPerformed(AlgorithmBase algorithm)
      This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithm when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
      Specified by:
      algorithmPerformed in interface AlgorithmInterface
      Parameters:
      algorithm - Algorithm that caused the event.

    • getResultImage

      public ModelImage getResultImage()
      Accessor that returns the image.
      Returns:
      The result image.

    • itemStateChanged

      public void itemStateChanged(ItemEvent event)
      Changes labels based on whether or not check box is checked.
      Specified by:
      itemStateChanged in interface ItemListener
      Overrides:
      itemStateChanged in class JDialogBase
      Parameters:
      event - event that cause the method to fire

    • setImage25D

      public void setImage25D(boolean flag)
      Accessor that sets the slicing flag.
      Parameters:
      flag - true indicates slices should be blurred independently.

    • callAlgorithm

      protected void callAlgorithm()
      Once all the necessary variables are set, call the Bilateral Filter algorithm based on what type of image this is and whether or not there is a separate destination image.
      Specified by:
      callAlgorithm in class JDialogScriptableBase

    • doPostAlgorithmActions

      protected void doPostAlgorithmActions()
      Perform any actions required after the running of the algorithm is complete.
      Overrides:
      doPostAlgorithmActions in class JDialogScriptableBase

    • setGUIFromParams

      protected void setGUIFromParams()
      Set up the dialog GUI based on the parameters before running the algorithm as part of a script.
      Specified by:
      setGUIFromParams in class JDialogScriptableBase

    • storeParamsFromGUI

      protected void storeParamsFromGUI() throws ParserException
      Store the parameters from the dialog to record the execution of this algorithm.
      Specified by:
      storeParamsFromGUI in class JDialogScriptableBase
      Throws:
      ParserException - If there is a problem creating one of the new parameters.

    • init

      private void init()
      Sets up the GUI (panels, buttons, etc) and displays it on the screen.

    • setVariables

      private boolean setVariables()
      Use the GUI results to set up the variables needed to run the algorithm.
      Returns:
      true if parameters set successfully, false otherwise.

    • getActionMetadata

      public ActionMetadata getActionMetadata()
      Return meta-information about this discoverable action for categorization and labeling purposes.
      Specified by:
      getActionMetadata in interface ActionDiscovery
      Returns:
      Metadata for this action.

    • createInputParameters

      public ParameterTable createInputParameters()
      Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used in setGUIFromParams()).
      Specified by:
      createInputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the inputs of this algorithm.

    • createOutputParameters

      public ParameterTable createOutputParameters()
      Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).
      Specified by:
      createOutputParameters in interface ActionDiscovery
      Returns:
      A parameter table listing the outputs of this algorithm.

    • getOutputImageName

      public String getOutputImageName(String imageParamName)
      Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).
      Specified by:
      getOutputImageName in interface ActionDiscovery
      Parameters:
      imageParamName - The output image parameter label for which to get the image name.
      Returns:
      The image name of the requested output image parameter label.

    • isActionComplete

      public boolean isActionComplete()
      Returns whether the action has successfully completed its execution.
      Specified by:
      isActionComplete in interface ActionDiscovery
      Returns:
      True, if the action is complete. False, if the action failed or is still running.