Package gov.nih.mipav.view.dialogs
Class JDialogAutoCorrelation
- java.lang.Object
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- java.awt.Component
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- java.awt.Container
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- java.awt.Window
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- java.awt.Dialog
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- javax.swing.JDialog
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- gov.nih.mipav.view.dialogs.JDialogBase
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- gov.nih.mipav.view.dialogs.JDialogScriptableBase
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- gov.nih.mipav.view.dialogs.JDialogAutoCorrelation
 
 
 
 
 
 
 
 
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- All Implemented Interfaces:
- AlgorithmInterface,- ScriptableActionInterface,- DialogDefaultsInterface,- ActionDiscovery,- java.awt.event.ActionListener,- java.awt.event.FocusListener,- java.awt.event.ItemListener,- java.awt.event.WindowListener,- java.awt.image.ImageObserver,- java.awt.MenuContainer,- java.io.Serializable,- java.util.EventListener,- javax.accessibility.Accessible,- javax.swing.RootPaneContainer,- javax.swing.WindowConstants
 
 public class JDialogAutoCorrelation extends JDialogScriptableBase implements AlgorithmInterface, ActionDiscovery, ScriptableActionInterface Dialog to call AlgorithmAutoCorrelation.- See Also:
- Serialized Form
 
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Nested Class Summary- 
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBaseJDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
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Nested classes/interfaces inherited from class javax.swing.JDialogjavax.swing.JDialog.AccessibleJDialog
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Nested classes/interfaces inherited from class java.awt.Dialogjava.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
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Nested classes/interfaces inherited from class java.awt.Windowjava.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
 
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Field SummaryFields Modifier and Type Field Description private AlgorithmAutoCorrelationalgoAutoCorrelationDOCUMENT ME!private booleanhaveBlueDOCUMENT ME!private booleanhaveGreenDOCUMENT ME!private booleanhaveRedDOCUMENT ME!private ModelImageimageDOCUMENT ME!private doublemaxBDOCUMENT ME!private doublemaxGDOCUMENT ME!private doublemaxRDOCUMENT ME!private doubleminBDOCUMENT ME!private doubleminGDOCUMENT ME!private doubleminRDOCUMENT ME!private ModelImageresultImageDOCUMENT ME!private ModelImageresultImageBDOCUMENT ME!private ModelImageresultImageGDOCUMENT ME!private ModelImageresultImageRDOCUMENT ME!private static longserialVersionUIDUse serialVersionUID for interoperability.private java.lang.String[]titlesDOCUMENT ME!private ViewUserInterfaceUIDOCUMENT ME!- 
Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasedisplayInNewFrame, isComplete, scriptParameters
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Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBaseapplyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager
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Fields inherited from class javax.swing.JDialogaccessibleContext, rootPane, rootPaneCheckingEnabled
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Fields inherited from class java.awt.ComponentBOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT
 
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Constructor SummaryConstructors Constructor Description JDialogAutoCorrelation()Empty constructor needed for dynamic instantiation (used during scripting).JDialogAutoCorrelation(java.awt.Frame theParentFrame, ModelImage im)Constructs new transform dialog and sets up GUI components.
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Method SummaryAll Methods Instance Methods Concrete Methods Modifier and Type Method Description voidactionPerformed(java.awt.event.ActionEvent event)Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm)This method is required if the AlgorithmPerformed interface is implemented.protected voidcallAlgorithm()Calls the algorithm with the set variables.ParameterTablecreateInputParameters()Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).ParameterTablecreateOutputParameters()Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voiddoPostAlgorithmActions()Register the result image(s) in the script runner.ActionMetadatagetActionMetadata()Return meta-information about this discoverable action for categorization and labeling purposes.java.lang.StringgetOutputImageName(java.lang.String imageParamName)Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).ModelImagegetResultImage()Accessor that returns the image.ModelImagegetResultImageB()Accessor that returns the blue image.ModelImagegetResultImageG()Accessor that returns the green image.ModelImagegetResultImageR()Accessor that returns the red image.private voidinit()Initializes the dialog box to a certain size and adds the components.booleanisActionComplete()Returns whether the action has successfully completed its execution.protected voidsetGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.private booleansetVariables()Sets the variables needed to run the algorithm.protected voidstoreParamsFromGUI()Record the parameters just used to run this algorithm in a script.- 
Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBasegetDialogActionString, insertScriptLine, isComplete, scriptRun, setComplete
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Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBasebuildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
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Methods inherited from class javax.swing.JDialogaddImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update
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Methods inherited from class java.awt.DialogaddNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack
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Methods inherited from class java.awt.WindowaddPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront
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Methods inherited from class java.awt.Containeradd, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree
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Methods inherited from class java.awt.Componentaction, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle
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Methods inherited from class java.lang.Objectclone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscoveryscriptRun
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Methods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterfaceinsertScriptLine, scriptRun
 
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Field Detail- 
serialVersionUIDprivate static final long serialVersionUID Use serialVersionUID for interoperability.- See Also:
- Constant Field Values
 
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algoAutoCorrelationprivate AlgorithmAutoCorrelation algoAutoCorrelation DOCUMENT ME!
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haveBlueprivate boolean haveBlue DOCUMENT ME!
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haveGreenprivate boolean haveGreen DOCUMENT ME!
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haveRedprivate boolean haveRed DOCUMENT ME!
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imageprivate ModelImage image DOCUMENT ME!
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maxRprivate double maxR DOCUMENT ME!
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maxGprivate double maxG DOCUMENT ME!
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maxBprivate double maxB DOCUMENT ME!
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minRprivate double minR DOCUMENT ME!
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minGprivate double minG DOCUMENT ME!
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minBprivate double minB DOCUMENT ME!
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resultImageprivate ModelImage resultImage DOCUMENT ME!
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resultImageBprivate ModelImage resultImageB DOCUMENT ME!
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resultImageGprivate ModelImage resultImageG DOCUMENT ME!
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resultImageRprivate ModelImage resultImageR DOCUMENT ME!
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titlesprivate java.lang.String[] titles DOCUMENT ME!
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UIprivate ViewUserInterface UI DOCUMENT ME!
 
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Constructor Detail- 
JDialogAutoCorrelationpublic JDialogAutoCorrelation() Empty constructor needed for dynamic instantiation (used during scripting).
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JDialogAutoCorrelationpublic JDialogAutoCorrelation(java.awt.Frame theParentFrame, ModelImage im)Constructs new transform dialog and sets up GUI components.- Parameters:
- theParentFrame- Parent frame.
- im- Source image.
 
 
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Method Detail- 
actionPerformedpublic void actionPerformed(java.awt.event.ActionEvent event) Closes dialog box when the OK button is pressed, sets the variables, and calls the algorithm.- Specified by:
- actionPerformedin interface- java.awt.event.ActionListener
- Overrides:
- actionPerformedin class- JDialogBase
- Parameters:
- event- Event that triggers function.
 
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algorithmPerformedpublic void algorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
- algorithmPerformedin interface- AlgorithmInterface
- Parameters:
- algorithm- Algorithm that caused the event.
 
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getResultImagepublic ModelImage getResultImage() Accessor that returns the image.- Returns:
- The result image
 
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getResultImageBpublic ModelImage getResultImageB() Accessor that returns the blue image.- Returns:
- The result blue image
 
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getResultImageGpublic ModelImage getResultImageG() Accessor that returns the green image.- Returns:
- The result green image
 
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getResultImageRpublic ModelImage getResultImageR() Accessor that returns the red image.- Returns:
- The result red image
 
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callAlgorithmprotected void callAlgorithm() Calls the algorithm with the set variables.- Specified by:
- callAlgorithmin class- JDialogScriptableBase
 
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doPostAlgorithmActionsprotected void doPostAlgorithmActions() Register the result image(s) in the script runner.- Overrides:
- doPostAlgorithmActionsin class- JDialogScriptableBase
 
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setGUIFromParamsprotected void setGUIFromParams() Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
- setGUIFromParamsin class- JDialogScriptableBase
 
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storeParamsFromGUIprotected void storeParamsFromGUI() throws ParserExceptionRecord the parameters just used to run this algorithm in a script.- Specified by:
- storeParamsFromGUIin class- JDialogScriptableBase
- Throws:
- ParserException- If there is a problem creating/recording the new parameters.
 
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initprivate void init() Initializes the dialog box to a certain size and adds the components.
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setVariablesprivate boolean setVariables() Sets the variables needed to run the algorithm.- Returns:
- Flag indicating successful set of the variables.
 
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getActionMetadatapublic ActionMetadata getActionMetadata() Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
- getActionMetadatain interface- ActionDiscovery
- Returns:
- Metadata for this action.
 
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createInputParameterspublic ParameterTable createInputParameters() Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
- createInputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the inputs of this algorithm.
 
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createOutputParameterspublic ParameterTable createOutputParameters() Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
- createOutputParametersin interface- ActionDiscovery
- Returns:
- A parameter table listing the outputs of this algorithm.
 
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getOutputImageNamepublic java.lang.String getOutputImageName(java.lang.String imageParamName) Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
- getOutputImageNamein interface- ActionDiscovery
- Parameters:
- imageParamName- The output image parameter label for which to get the image name.
- Returns:
- The image name of the requested output image parameter label.
 
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isActionCompletepublic boolean isActionComplete() Returns whether the action has successfully completed its execution.- Specified by:
- isActionCompletein interface- ActionDiscovery
- Returns:
- True, if the action is complete. False, if the action failed or is still running.
 
 
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