Package gov.nih.mipav.view.dialogs
Class JDialogAHElocal
java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogAHElocal
- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,ActionDiscovery,ActionListener,FocusListener,ItemListener,WindowListener,ImageObserver,MenuContainer,Serializable,EventListener,Accessible,RootPaneContainer,WindowConstants
public class JDialogAHElocal
extends JDialogScriptableBase
implements AlgorithmInterface, ActionDiscovery, ScriptableActionInterface
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the
source image.
In should be noted, that the algorithms are executed in their own thread.
- Version:
- 1.0; 17 September 2001
- Author:
- parsonsd, Matthew J. McAuliffe, Ph.D.
- See Also:
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Nested Class Summary
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKActionNested classes/interfaces inherited from class javax.swing.JDialog
JDialog.AccessibleJDialogNested classes/interfaces inherited from class java.awt.Dialog
Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityTypeNested classes/interfaces inherited from class java.awt.Window
Window.AccessibleAWTWindow, Window.TypeNested classes/interfaces inherited from class java.awt.Container
Container.AccessibleAWTContainerNested classes/interfaces inherited from class java.awt.Component
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy -
Field Summary
FieldsModifier and TypeFieldDescriptionprivate AlgorithmAHElocalDOCUMENT ME!private JCheckBoxprivate JRadioButtonprivate booleanDOCUMENT ME!private JCheckBoxDOCUMENT ME!private JLabelDOCUMENT ME!private intDOCUMENT ME!private JTextFieldDOCUMENT ME!private ButtonGroupprivate JPanelColorChannelsDOCUMENT ME!private JComboBoxDOCUMENT ME!private JComboBoxDOCUMENT ME!private JComboBoxDOCUMENT ME!private JCheckBoxprivate ModelImageDOCUMENT ME!private intDOCUMENT ME!private intDOCUMENT ME!private float[]private float[]private JLabelDOCUMENT ME!private JTextFieldDOCUMENT ME!private floatDOCUMENT ME!private floatprivate floatprivate JPanelAlgorithmOutputOptionsDOCUMENT ME!private JCheckBoxprivate ModelImageDOCUMENT ME!private JRadioButtonprivate intDOCUMENT ME!private static final longUse serialVersionUID for interoperability.private booleanDOCUMENT ME!private JCheckBoxDOCUMENT ME!private String[]DOCUMENT ME!private booleanprivate booleanprivate booleanprivate booleanprivate ViewUserInterfaceDOCUMENT ME!Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParametersFields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManagerFields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabledFields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPEFields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENTFields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTHFields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE -
Constructor Summary
ConstructorsConstructorDescriptionEmpty constructor needed for dynamic instantiation (used during scripting).JDialogAHElocal(Frame theParentFrame, ModelImage im) Creates a new JDialogAHElocal object. -
Method Summary
Modifier and TypeMethodDescriptionvoidactionPerformed(ActionEvent event) Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented.protected voidbuildClamping(JPanel holder, GridBagConstraints gbc, GridBagLayout gbl) controls the entire creation of the clamping panel and all controls related to the display of the clamping parameter. places the clamping panel into the holder panel.private JPanelbuildKernelPanel(GridBagConstraints gbc, GridBagLayout gbl) Creates the panel that allow user to select the kernel size and shape of the image when building the histogram.protected voidbuildKernelShape(JPanel holder, GridBagConstraints gbc, GridBagLayout gbl) Creates the comboBox that allows user to define the way the neighboring pixels are chosen for the histogram.protected voidbuildKernelSize(JPanel holder, GridBagConstraints gbc, GridBagLayout gbl) Creates the editable text comboBox that allows user to define the number of neighboring pixels used for the histogram. the number given may only be odd, as this is the total number of pixels chosen on both sides.protected voidbuildScaleMax(JPanel holder, GridBagConstraints gbc, GridBagLayout gbl) define the possibilities of where the scale max comes from.protected voidbuildThreshold(JPanel holder, GridBagConstraints gbc, GridBagLayout gbl) Creates the txt-box that allows user to insert the bottom-end pixels to skip.protected voidOnce all the necessary variables are set, call the local AHE algorithm based on what type of image this is and whether or not there is a separate destination image.private voidconvertRGBtoCIELab(float[] buffer, float[] L, float[] a, float[] b, float[] Lmin, float[] Lmax) Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voidUsed to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table).Return meta-information about this discoverable action for categorization and labeling purposes.getOutputImageName(String imageParamName) Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).Accessor that returns the image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.booleanReturns whether the action has successfully completed its execution.protected voidTakes a text field, and forces the textfield to accept numbers, backspace and delete-key entries.protected voidTakes a text field, and forces the textfield to accept numbers, backspace and delete-key entries.voidsetClampFlag(boolean flag) Accessor that sets the clamp flag.voidsetClampingValue(int value) Accessor that sets the clamping value.protected voidSet the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetKernelShape(int value) Accessor that sets the kernel shape.voidsetKernelSize(int value) Accessor that sets the kernel size.voidsetScaleMaxValue(int value) Accessor that sets the max scale value (from the combo box).voidsetThresholdFlag(boolean flag) Accessor that sets the threshold flag.voidsetThresholdValue(float value) Accessor that sets the minThreshold value.private booleanUse the GUI results to set up the variables needed to run the algorithm.protected voidRecord the parameters just used to run this algorithm in a script.Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setCompleteMethods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpenedMethods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, updateMethods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBackMethods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFrontMethods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTreeMethods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycleMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, waitMethods inherited from interface gov.nih.mipav.view.dialogs.ActionDiscovery
scriptRunMethods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterface
insertScriptLine, scriptRun
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Field Details
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serialVersionUID
private static final long serialVersionUIDUse serialVersionUID for interoperability.- See Also:
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aheAlgo
DOCUMENT ME! -
clamp
private boolean clampDOCUMENT ME! -
clampCheckBox
DOCUMENT ME! -
clampLabel
DOCUMENT ME! -
clampValue
private int clampValueDOCUMENT ME! -
clampValueText
DOCUMENT ME! -
colorPanel
DOCUMENT ME! -
comboBoxKernelShape
DOCUMENT ME! -
comboBoxKernelSize
DOCUMENT ME! -
comboBoxScaleMax
DOCUMENT ME! -
image
DOCUMENT ME! -
kernelShape
private int kernelShapeDOCUMENT ME! -
kernelSize
private int kernelSizeDOCUMENT ME! -
minThresholdLabel
DOCUMENT ME! -
minThresholdText
DOCUMENT ME! -
minThresholdValueL
private float minThresholdValueL -
minThresholdValueRGB
private float minThresholdValueRGB -
minThresholdValue
private float minThresholdValueDOCUMENT ME! -
outputPanel
DOCUMENT ME! -
resultImage
DOCUMENT ME! -
scaleMaxValue
private int scaleMaxValueDOCUMENT ME! -
threshold
private boolean thresholdDOCUMENT ME! -
thresholdCheckBox
DOCUMENT ME! -
titles
DOCUMENT ME! -
userInterface
DOCUMENT ME! -
useCIELab
private boolean useCIELab -
colorGroup
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CIELabButton
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RGBButton
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redBox
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greenBox
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blueBox
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useRed
private boolean useRed -
useGreen
private boolean useGreen -
useBlue
private boolean useBlue -
Lmin
private float[] Lmin -
Lmax
private float[] Lmax
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Constructor Details
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JDialogAHElocal
public JDialogAHElocal()Empty constructor needed for dynamic instantiation (used during scripting). -
JDialogAHElocal
Creates a new JDialogAHElocal object.- Parameters:
theParentFrame- Parent frame.im- Source image.
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Method Details
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actionPerformed
Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformedin interfaceActionListener- Overrides:
actionPerformedin classJDialogBase- Parameters:
event- Event that triggers function.
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algorithmPerformed
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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getResultImage
Accessor that returns the image.- Returns:
- The result image.
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setClampFlag
public void setClampFlag(boolean flag) Accessor that sets the clamp flag.- Parameters:
flag-trueindicates clamp,falseotherwise.
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setClampingValue
public void setClampingValue(int value) Accessor that sets the clamping value.- Parameters:
value- Value to set clamping to.
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setKernelShape
public void setKernelShape(int value) Accessor that sets the kernel shape.- Parameters:
value- Value to set kernel shape to.
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setKernelSize
public void setKernelSize(int value) Accessor that sets the kernel size.- Parameters:
value- Value to set kernel size to.
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setScaleMaxValue
public void setScaleMaxValue(int value) Accessor that sets the max scale value (from the combo box).- Parameters:
value- Value to set max scale value to - local, slice, or image.
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setThresholdFlag
public void setThresholdFlag(boolean flag) Accessor that sets the threshold flag.- Parameters:
flag-trueindicates threshold,falseotherwise.
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setThresholdValue
public void setThresholdValue(float value) Accessor that sets the minThreshold value.- Parameters:
value- Value to set minThresholdValue to.
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buildClamping
controls the entire creation of the clamping panel and all controls related to the display of the clamping parameter. places the clamping panel into the holder panel.- Parameters:
holder- DOCUMENT ME!gbc- DOCUMENT ME!gbl- DOCUMENT ME!
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buildKernelShape
Creates the comboBox that allows user to define the way the neighboring pixels are chosen for the histogram. The kernel-shape may be- square
- cross (shaped like a '+')
builds the label to be used, applies it to the left side of the JPanel holder, then builds the drop-box so the user may make a selection, and applies it to the far-right of the JPanel holder.
- Parameters:
holder- DOCUMENT ME!gbc- DOCUMENT ME!gbl- DOCUMENT ME!
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buildKernelSize
Creates the editable text comboBox that allows user to define the number of neighboring pixels used for the histogram. the number given may only be odd, as this is the total number of pixels chosen on both sides. For any pixel, there are floor(kernelSize/2) pixels in either the horizontal or vertical direction. Alternatively, it describes a box of the number here on a side, for which the pixel in question is at the center. The drop-box has pre-selected:- 21
- 45
- 65
- 129
but any odd figure could be entered.
builds the label to be used, applies it to the left side of the JPanel holder, then builds the drop-box so the user may make a selection, and applies it to the far-right of the JPanel holder.
- Parameters:
holder- DOCUMENT ME!gbc- DOCUMENT ME!gbl- DOCUMENT ME!
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buildScaleMax
define the possibilities of where the scale max comes from.- Parameters:
holder- DOCUMENT ME!gbc- DOCUMENT ME!gbl- DOCUMENT ME!
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buildThreshold
Creates the txt-box that allows user to insert the bottom-end pixels to skip. Number entered into the textfield is minimum value of the pixels considered. Defaults to the image minimum.- Parameters:
holder- DOCUMENT ME!gbc- DOCUMENT ME!gbl- DOCUMENT ME!
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convertRGBtoCIELab
private void convertRGBtoCIELab(float[] buffer, float[] L, float[] a, float[] b, float[] Lmin, float[] Lmax) -
callAlgorithm
protected void callAlgorithm()Once all the necessary variables are set, call the local AHE algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithmin classJDialogScriptableBase- See Also:
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doPostAlgorithmActions
protected void doPostAlgorithmActions()Used to perform actions after the execution of the algorithm is completed (e.g., put the result image in the image table). Defaults to no action, override to actually have it do something.- Overrides:
doPostAlgorithmActionsin classJDialogScriptableBase
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makeFloatingPointOnly
Takes a text field, and forces the textfield to accept numbers, backspace and delete-key entries.- Parameters:
txt- Text field to modify.
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makeNumericsOnly
Takes a text field, and forces the textfield to accept numbers, backspace and delete-key entries.- Parameters:
txt- Text field to modify.
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setGUIFromParams
protected void setGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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storeParamsFromGUI
Record the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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buildKernelPanel
Creates the panel that allow user to select the kernel size and shape of the image when building the histogram. Contains clamping attributes.- Parameters:
gbc- DOCUMENT ME!gbl- DOCUMENT ME!- Returns:
- the panel that allows setting kernel attributes
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init
private void init()Sets up the GUI (panels, buttons, etc) and displays it on the screen. -
setVariables
private boolean setVariables()Use the GUI results to set up the variables needed to run the algorithm.- Returns:
trueif parameters set successfully,falseotherwise.
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getActionMetadata
Return meta-information about this discoverable action for categorization and labeling purposes.- Specified by:
getActionMetadatain interfaceActionDiscovery- Returns:
- Metadata for this action.
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createInputParameters
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Specified by:
createInputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Specified by:
createOutputParametersin interfaceActionDiscovery- Returns:
- A parameter table listing the outputs of this algorithm.
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getOutputImageName
Returns the name of an image output by this algorithm, the image returned depends on the parameter label given (which can be used to retrieve the image object from the image registry).- Specified by:
getOutputImageNamein interfaceActionDiscovery- Parameters:
imageParamName- The output image parameter label for which to get the image name.- Returns:
- The image name of the requested output image parameter label.
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isActionComplete
public boolean isActionComplete()Returns whether the action has successfully completed its execution.- Specified by:
isActionCompletein interfaceActionDiscovery- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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